Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_L23
(559 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3101|AAN13904.1| 713|Drosophila melanogaster CG31423-P... 31 0.80
BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p pro... 29 3.2
AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein. 29 3.2
AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein. 29 3.2
AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein. 29 3.2
AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein. 29 3.2
AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB... 29 3.2
AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-P... 29 3.2
AY118602-1|AAM49971.1| 267|Drosophila melanogaster LP04242p pro... 28 7.4
AY071262-1|AAL48884.1| 94|Drosophila melanogaster RE29909p pro... 28 7.4
AY071145-1|AAL48767.1| 520|Drosophila melanogaster RE18068p pro... 28 7.4
AE014298-1250|AAF46427.2| 94|Drosophila melanogaster CG10962-P... 28 7.4
AE014297-1231|AAF54580.2| 520|Drosophila melanogaster CG4674-PA... 28 7.4
AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB... 28 7.4
AE014296-559|AAF47715.2| 938|Drosophila melanogaster CG14955-PA... 28 7.4
AY061070-1|AAL28618.1| 606|Drosophila melanogaster LD04071p pro... 28 9.8
AE014296-2547|AAF49610.2| 606|Drosophila melanogaster CG32149-P... 28 9.8
AE014296-2546|AAN11778.1| 604|Drosophila melanogaster CG32149-P... 28 9.8
AE014296-2545|AAF49609.2| 896|Drosophila melanogaster CG32149-P... 28 9.8
>AE014297-3101|AAN13904.1| 713|Drosophila melanogaster CG31423-PA
protein.
Length = 713
Score = 31.5 bits (68), Expect = 0.80
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 245 IVIMVFGMICANVYGCGRSTHCTEPSEVVRLRSFK 141
+VI VFG++ +N C S T+P++ ++R+FK
Sbjct: 480 LVISVFGLVYSNFVSCTLSALLTKPAQNPQVRNFK 514
>BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p
protein.
Length = 1105
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 357 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 226
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 117 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 160
>AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 357 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 226
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 357 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 226
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 357 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 226
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 357 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 226
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB
protein.
Length = 1413
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 357 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 226
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-PA
protein.
Length = 706
Score = 29.5 bits (63), Expect = 3.2
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 207 YICTYHPKNHYNDTFAKNCGSIASLS 284
Y+C HP+ +Y + K C +I SL+
Sbjct: 139 YMCALHPRRYYQHSSKKGCVAILSLT 164
>AY118602-1|AAM49971.1| 267|Drosophila melanogaster LP04242p
protein.
Length = 267
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 254 CERIVIMVFGMICANVYGC-----GRSTHCTEPSEVVRLRSFKRSLLPLQLVGFPPPLSP 90
C + +++ G++ +Y G HC+ S RL + P++ PPPL+P
Sbjct: 60 CPLVRLLILGLLALPIYNAILIVVGWRLHCSVSSSAERLVVDSQGNRPVKRQAPPPPLAP 119
>AY071262-1|AAL48884.1| 94|Drosophila melanogaster RE29909p
protein.
Length = 94
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 58 GGDREDNSRKEGESGGGNPTS*SGRS 135
GG R+ + R EG++G GNP RS
Sbjct: 19 GGHRDRSGRNEGQAGRGNPPGGRRRS 44
>AY071145-1|AAL48767.1| 520|Drosophila melanogaster RE18068p
protein.
Length = 520
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 140 RSLLPLQLVGFPPPLSPSFRELSSLSPPP 54
+S P L +PPP SP + L +L+PPP
Sbjct: 430 QSYPPPHLPAYPPPESPQY-SLLALTPPP 457
>AE014298-1250|AAF46427.2| 94|Drosophila melanogaster CG10962-PA,
isoform A protein.
Length = 94
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 58 GGDREDNSRKEGESGGGNPTS*SGRS 135
GG R+ + R EG++G GNP RS
Sbjct: 19 GGHRDRSGRNEGQAGRGNPPGGRRRS 44
>AE014297-1231|AAF54580.2| 520|Drosophila melanogaster CG4674-PA
protein.
Length = 520
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 140 RSLLPLQLVGFPPPLSPSFRELSSLSPPP 54
+S P L +PPP SP + L +L+PPP
Sbjct: 430 QSYPPPHLPAYPPPESPQY-SLLALTPPP 457
>AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB,
isoform B protein.
Length = 1035
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 254 CERIVIMVFGMICANVYGC-----GRSTHCTEPSEVVRLRSFKRSLLPLQLVGFPPPLSP 90
C + +++ G++ +Y G HC+ S RL + P++ PPPL+P
Sbjct: 828 CPLVRLLILGLLALPIYNAILIVVGWRLHCSVSSSAERLVVDSQGNRPVKRQAPPPPLAP 887
>AE014296-559|AAF47715.2| 938|Drosophila melanogaster CG14955-PA,
isoform A protein.
Length = 938
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 254 CERIVIMVFGMICANVYGC-----GRSTHCTEPSEVVRLRSFKRSLLPLQLVGFPPPLSP 90
C + +++ G++ +Y G HC+ S RL + P++ PPPL+P
Sbjct: 731 CPLVRLLILGLLALPIYNAILIVVGWRLHCSVSSSAERLVVDSQGNRPVKRQAPPPPLAP 790
>AY061070-1|AAL28618.1| 606|Drosophila melanogaster LD04071p
protein.
Length = 606
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 55 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 168
GGG+R S G SGGG S G KL+ T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526
>AE014296-2547|AAF49610.2| 606|Drosophila melanogaster CG32149-PA,
isoform A protein.
Length = 606
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 55 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 168
GGG+R S G SGGG S G KL+ T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526
>AE014296-2546|AAN11778.1| 604|Drosophila melanogaster CG32149-PB,
isoform B protein.
Length = 604
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 55 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 168
GGG+R S G SGGG S G KL+ T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526
>AE014296-2545|AAF49609.2| 896|Drosophila melanogaster CG32149-PC,
isoform C protein.
Length = 896
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 55 GGGDREDNSRKEGESGGGNPTS*SGRSDRLKLRNLTTS 168
GGG+R S G SGGG S G KL+ T S
Sbjct: 489 GGGERRTGSGAAGGSGGGASGSAVGNPTPPKLKQRTCS 526
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,562,426
Number of Sequences: 53049
Number of extensions: 531755
Number of successful extensions: 1733
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2151905496
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -