Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_L22
(626 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 419 e-119
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 400 e-114
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 332 1e-93
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 172 3e-45
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 164 5e-43
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 25 0.60
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.2
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 22 4.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 5.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 5.6
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 21 7.4
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 7.4
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 419 bits (1032), Expect = e-119
Identities = 193/205 (94%), Positives = 197/205 (96%)
Frame = +1
Query: 10 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGK 189
FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGK
Sbjct: 167 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGK 226
Query: 190 CLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANIT 369
CLIEALDAILPP RPTDKALRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +T
Sbjct: 227 CLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLT 286
Query: 370 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 549
TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPP+GAADFTAQVIV
Sbjct: 287 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGAADFTAQVIV 346
Query: 550 LNHPGQISNGYTPVLDCHTGHIACK 624
LNHPGQISNGYTPVLDCHT HIACK
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIACK 371
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 400 bits (985), Expect = e-114
Identities = 184/205 (89%), Positives = 193/205 (94%)
Frame = +1
Query: 10 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGK 189
FEEIKKEVSSYIKKIGYN A+VAFVPISGWHGDNMLEPS K PW+KGW VERK+G A+GK
Sbjct: 167 FEEIKKEVSSYIKKIGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGK 226
Query: 190 CLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANIT 369
LIEALDAILPP+RPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPG +V FAPA +T
Sbjct: 227 TLIEALDAILPPSRPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGMLVTFAPAALT 286
Query: 370 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIV 549
TEVKSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIV
Sbjct: 287 TEVKSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIV 346
Query: 550 LNHPGQISNGYTPVLDCHTGHIACK 624
LNHPGQISNGYTPVLDCHT HIACK
Sbjct: 347 LNHPGQISNGYTPVLDCHTAHIACK 371
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 431 LSPGTASCRASWCISTDLTSVVMLAGAKTTTVPG 330
L PG A ++T++ SV M A T +PG
Sbjct: 272 LKPGMLVTFAPAALTTEVKSVEMHHEALTEALPG 305
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 332 bits (817), Expect = 1e-93
Identities = 155/165 (93%), Positives = 158/165 (95%)
Frame = +1
Query: 10 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGK 189
FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGK
Sbjct: 110 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGK 169
Query: 190 CLIEALDAILPPARPTDKALRLPLQDVYKIGGIGTVPVGRVETGILKPGTVVVFAPANIT 369
CLIEALDAILPP RPTDKALRLPLQDVYKIGGIGTVPVGRVETG+LKPG VV FAPA +T
Sbjct: 170 CLIEALDAILPPTRPTDKALRLPLQDVYKIGGIGTVPVGRVETGVLKPGMVVTFAPAGLT 229
Query: 370 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 504
TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN
Sbjct: 230 TEVKSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKN 274
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 172 bits (418), Expect = 3e-45
Identities = 77/82 (93%), Positives = 79/82 (96%)
Frame = +1
Query: 379 KSVEMHHEALQEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNH 558
KSVEMHHEAL EA+PGDNVGFNVKN+SVKELRRGYVAGDSKN PPRGAADFTAQVIVLNH
Sbjct: 1 KSVEMHHEALTEALPGDNVGFNVKNISVKELRRGYVAGDSKNQPPRGAADFTAQVIVLNH 60
Query: 559 PGQISNGYTPVLDCHTGHIACK 624
PGQISNGYTPVLDCHT HIACK
Sbjct: 61 PGQISNGYTPVLDCHTAHIACK 82
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 164 bits (399), Expect = 5e-43
Identities = 74/79 (93%), Positives = 75/79 (94%)
Frame = +1
Query: 10 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWLVERKEGKAEGK 189
FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK EGK
Sbjct: 94 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGK 153
Query: 190 CLIEALDAILPPARPTDKA 246
CLIEALDAILPP RPTDKA
Sbjct: 154 CLIEALDAILPPTRPTDKA 172
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 25.0 bits (52), Expect = 0.60
Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +2
Query: 71 PSLSYPFLAGTEITC-WSRPPKCHGSRDGWLSVKKE 175
P+L F G + C SRP +C G DG++ KE
Sbjct: 160 PALEEQFATGRVLACISSRPGQC-GREDGYILEGKE 194
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 501 KQPTQGSCRLHSASHCAKSPRSNIKRIHTCIGLPHRP 611
K TQ S + + + P S +R HT G+P +P
Sbjct: 1048 KTYTQYSVVVQAFNKVGSGPMSEERRQHTAEGVPEQP 1084
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 3.2
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -3
Query: 75 DGSRIVTNFLDVGRDFL 25
DG R+V F+DV +D +
Sbjct: 531 DGQRLVYQFVDVPKDII 547
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/39 (20%), Positives = 20/39 (51%)
Frame = -1
Query: 392 ISTDLTSVVMLAGAKTTTVPGFRIPVSTLPTGTVPIPPI 276
+ T++T+ + ++ G +P+++LP + I I
Sbjct: 831 VVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSI 869
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 457 SVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPG 564
S ++LR ++A + + P+G Q++VLN G
Sbjct: 283 STRDLREIHLAYNGLRDLPKGIFTRLEQLLVLNLAG 318
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.8 bits (44), Expect = 5.6
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +2
Query: 155 WLSVKKERLKVNALLRPSTPSFRLLAPLTRLSVF 256
W++ E+ K RP LL L RLS++
Sbjct: 3 WINRDGEKWKGKMSQRPLARMLALLVSLHRLSIY 36
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +2
Query: 428 TMLVSTSKTYLSRNCAVVTLQEIRKTTHPGELQTSQRKSLC 550
++ V TS + L + + + R HP EL+ S C
Sbjct: 402 SLFVETSASELVESSVLFPSLDSRDELHPRELEAVNLGSAC 442
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 176 RLKVNALLRPSTPSFR 223
RL +N +LRP P F+
Sbjct: 274 RLLMNDILRPYVPEFK 289
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 176 RLKVNALLRPSTPSFR 223
RL +N +LRP P F+
Sbjct: 189 RLLMNDILRPYVPEFK 204
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 7.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 176 RLKVNALLRPSTPSFR 223
RL +N +LRP P F+
Sbjct: 508 RLLMNDILRPYVPEFK 523
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.316 0.137 0.416
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,834
Number of Sequences: 438
Number of extensions: 4225
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18704709
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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