SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_L21
         (572 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC028572-1|AAH28572.1|  716|Homo sapiens FLYWCH-type zinc finger...    35   0.23 
BC018712-1|AAH18712.1|  391|Homo sapiens FLYWCH1 protein protein.      35   0.23 
BC001973-1|AAH01973.1|  466|Homo sapiens FLYWCH1 protein protein.      35   0.23 
AK127235-1|BAC86896.1|  328|Homo sapiens protein ( Homo sapiens ...    35   0.23 
AB046772-1|BAB13378.1|  726|Homo sapiens KIAA1552 protein protein.     35   0.23 

>BC028572-1|AAH28572.1|  716|Homo sapiens FLYWCH-type zinc finger 1
           protein.
          Length = 716

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   +++
Sbjct: 509 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVM 560



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   ++
Sbjct: 421 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRV 471



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F + S G   +   +  YR  K  G K  W C    R GCR++  T   +I+
Sbjct: 600 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGHRIM 651



 Score = 33.5 bits (73), Expect = 0.54
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRIRFFSR 327
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+    R
Sbjct: 507 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRR 564



 Score = 33.1 bits (72), Expect = 0.71
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 175 GSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCK 282
           G + L+ +   Y+Q  K  G K+ W+C  HA+ GC+
Sbjct: 122 GGRLLVLESFLYKQE-KAVGDKVYWKCRQHAELGCR 156



 Score = 32.7 bits (71), Expect = 0.94
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHT 455
           F +   G  ++ + +  Y+  K  G K  W+C  H   GCR +  T
Sbjct: 116 FLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCRQHAELGCRGRAIT 161



 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+
Sbjct: 419 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRV 471



 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 169 SKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           S G + L+++   YR+  K  G K+ W C   A+ GC++   T   RI
Sbjct: 604 SLGGRFLVHESFLYRKE-KAAGEKVYWMCRDQARLGCRSRAITQGHRI 650



 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 175 GSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           G   L+++   Y++  K  G K+ W C  HA +GC++   T   R+
Sbjct: 279 GGSFLVHESFLYKRE-KAVGDKVYWTCRDHALHGCRSRAITQGQRV 323



 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F +   G   +   +  Y+  K  G K  W C  H   GCR++  T   ++
Sbjct: 273 FLRTCYGGSFLVHESFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRV 323


>BC018712-1|AAH18712.1|  391|Homo sapiens FLYWCH1 protein protein.
          Length = 391

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   +++
Sbjct: 184 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVM 235



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   ++
Sbjct: 96  FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRV 146



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F + S G   +   +  YR  K  G K  W C    R GCR++  T   +I+
Sbjct: 275 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGHRIM 326



 Score = 33.5 bits (73), Expect = 0.54
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRIRFFSR 327
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+    R
Sbjct: 182 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRR 239



 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+
Sbjct: 94  PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRV 146



 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 169 SKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           S G + L+++   YR+  K  G K+ W C   A+ GC++   T   RI
Sbjct: 279 SLGGRFLVHESFLYRKE-KAAGEKVYWMCRDQARLGCRSRAITQGHRI 325


>BC001973-1|AAH01973.1|  466|Homo sapiens FLYWCH1 protein protein.
          Length = 466

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   +++
Sbjct: 271 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVM 322



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   ++
Sbjct: 183 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRV 233



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F + S G   +   +  YR  K  G K  W C    R GCR++  T   +I+
Sbjct: 362 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGHRIM 413



 Score = 33.5 bits (73), Expect = 0.54
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRIRFFSR 327
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+    R
Sbjct: 269 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRR 326



 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+
Sbjct: 181 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRV 233



 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 169 SKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           S G + L+++   YR+  K  G K+ W C   A+ GC++   T   RI
Sbjct: 366 SLGGRFLVHESFLYRKE-KAAGEKVYWMCRDQARLGCRSRAITQGHRI 412



 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 175 GSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           G   L+++   Y++  K  G K+ W C  HA +GC++   T   R+
Sbjct: 41  GGSFLVHESFLYKRE-KAVGDKVYWTCRDHALHGCRSRAITQGQRV 85



 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F +   G   +   +  Y+  K  G K  W C  H   GCR++  T   ++
Sbjct: 35  FLRTCYGGSFLVHESFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRV 85


>AK127235-1|BAC86896.1|  328|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45302 fis, clone BRHIP3003845. ).
          Length = 328

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   +++
Sbjct: 121 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVM 172



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F + S G   +   +  YR  K  G K  W C    R GCR++  T   +I+
Sbjct: 212 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGHRIM 263



 Score = 33.5 bits (73), Expect = 0.54
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRIRFFSR 327
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+    R
Sbjct: 119 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRR 176



 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 169 SKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           S G + L+++   YR+  K  G K+ W C   A+ GC++   T   RI
Sbjct: 216 SLGGRFLVHESFLYRKE-KAAGEKVYWMCRDQARLGCRSRAITQGHRI 262


>AB046772-1|BAB13378.1|  726|Homo sapiens KIAA1552 protein protein.
          Length = 726

 Score = 34.7 bits (76), Expect = 0.23
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   +++
Sbjct: 519 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRVM 570



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 15/51 (29%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F K   G   +   +  YR  K  G K  W C    R GCR++  T   ++
Sbjct: 431 FLKTPLGGSFLVYESFLYRREKAAGEKVYWTCRDQARMGCRSRAITQGRRV 481



 Score = 34.3 bits (75), Expect = 0.31
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKIV 473
           F + S G   +   +  YR  K  G K  W C    R GCR++  T   +I+
Sbjct: 610 FLRTSLGGRFLVHESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGHRIM 661



 Score = 33.5 bits (73), Expect = 0.54
 Identities = 17/59 (28%), Positives = 26/59 (44%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRIRFFSR 327
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+    R
Sbjct: 517 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRVMVMRR 574



 Score = 33.1 bits (72), Expect = 0.71
 Identities = 13/36 (36%), Positives = 21/36 (58%)
 Frame = +1

Query: 175 GSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCK 282
           G + L+ +   Y+Q  K  G K+ W+C  HA+ GC+
Sbjct: 132 GGRLLVLESFLYKQE-KAVGDKVYWKCRQHAELGCR 166



 Score = 32.7 bits (71), Expect = 0.94
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHT 455
           F +   G  ++ + +  Y+  K  G K  W+C  H   GCR +  T
Sbjct: 126 FLRTPFGGRLLVLESFLYKQEKAVGDKVYWKCRQHAELGCRGRAIT 171



 Score = 32.7 bits (71), Expect = 0.94
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 151 PIIVTNSKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           P  +    G   L+Y+   YR+  K  G K+ W C   A+ GC++   T   R+
Sbjct: 429 PEFLKTPLGGSFLVYESFLYRRE-KAAGEKVYWTCRDQARMGCRSRAITQGRRV 481



 Score = 32.3 bits (70), Expect = 1.2
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +1

Query: 169 SKGSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           S G + L+++   YR+  K  G K+ W C   A+ GC++   T   RI
Sbjct: 614 SLGGRFLVHESFLYRKE-KAAGEKVYWMCRDQARLGCRSRAITQGHRI 660



 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 175 GSKTLIYQGNRYRQNGKKEGAKLRWRCTTHAKYGCKAIIHTIAGRI 312
           G   L+++   Y++  K  G K+ W C  HA +GC++   T   R+
Sbjct: 289 GGSFLVHESFLYKRE-KAVGDKVYWTCRDHALHGCRSRAITQGQRV 333



 Score = 30.7 bits (66), Expect = 3.8
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = +3

Query: 318 FFKNSRGNDVVFVGNNKYRINKTRGTKTIWRCSTHERFGCRAKIHTVNSKI 470
           F +   G   +   +  Y+  K  G K  W C  H   GCR++  T   ++
Sbjct: 283 FLRTCYGGSFLVHESFLYKREKAVGDKVYWTCRDHALHGCRSRAITQGQRV 333


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,539,264
Number of Sequences: 237096
Number of extensions: 1421721
Number of successful extensions: 2577
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2577
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -