Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_L16
         (582 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   1.8  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   1.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    25   2.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   5.5  
X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.     23   7.2  
AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    23   7.2  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 160 RELDLSNTGRGVWLVKVPKYIANKWEKAPGNIEV 261
           R LDLS     V L+K P  + ++W+ +   I++
Sbjct: 146 RSLDLSKAKTTVRLLKKPPSLDSEWKSSTSTIQL 179


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 340 KDPGEQNIPKEHILDVSNVTRQSLGV 417
           K PG   IPKE  L   +V  + LG+
Sbjct: 460 KSPGPDGIPKEFYLRAFDVIERELGL 485


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 235 EKAPGNIEVGKLKISRVPGQRTQVQLSLSETVLCLKD 345
           +K    IE  + KI  +  Q+T+V+  L+  +  LKD
Sbjct: 421 KKNKKEIEESEAKIESLTRQKTEVEAKLTANLATLKD 457


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 311  YPYLRPFFASRILENKTYQ 367
            +PY R  +A+   ENK YQ
Sbjct: 1783 FPYSRTIYANDPTENKQYQ 1801


>X95912-1|CAA65156.1|  696|Anopheles gambiae immune factor protein.
          Length = 696

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -2

Query: 185 PVFDKSNSRSILGAL 141
           PVF+ S  RS+LG+L
Sbjct: 596 PVFNSSELRSVLGSL 610


>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 249 SWSLLPFICYIFRYLHKPYS 190
           SW LLP+  + F +L   +S
Sbjct: 541 SWDLLPYFWFAFHWLAMSHS 560


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,790
Number of Sequences: 2352
Number of extensions: 12770
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)