Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_L15
(422 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyce... 31 0.056
SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|c... 31 0.074
SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 29 0.23
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.30
SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces pombe... 29 0.39
SPCC18B5.11c |cds1||replication checkpoint kinase Cds1|Schizosac... 29 0.39
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 29 0.39
SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|ch... 29 0.39
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 28 0.52
SPBC428.07 |meu6||meiotic chromosome segregation protein Meu6|Sc... 28 0.69
SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces pom... 27 0.91
SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces p... 27 1.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 1.6
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 27 1.6
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 27 1.6
SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces po... 26 2.1
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 26 2.8
SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyce... 26 2.8
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 26 2.8
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 25 3.7
SPBP4H10.20 |nhm1|DcpS|m7G|Schizosaccharomyces pombe|chr 2|||Manual 25 4.8
SPBC244.02c |||U3 snoRNP-associated protein Utp6 |Schizosaccharo... 25 6.4
SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit... 25 6.4
SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces p... 25 6.4
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 25 6.4
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 25 6.4
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 6.4
SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomy... 25 6.4
SPAC22E12.11c |set3||histone lysine methyltransferase Set3|Schiz... 25 6.4
SPAC644.12 |cdc5||cell division control protein Cdc5|Schizosacch... 25 6.4
SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein Zds1|Sch... 25 6.4
SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase Srk1|Schizo... 24 8.5
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 24 8.5
SPBC27B12.11c |||transcription factor |Schizosaccharomyces pombe... 24 8.5
>SPAC19G12.07c |rsd1||RNA-binding protein Rsd1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 604
Score = 31.5 bits (68), Expect = 0.056
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 1/88 (1%)
Frame = +3
Query: 159 SRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQ 338
SR +H+ DDY P + +RS+ R + + Y + R H++ ++++
Sbjct: 165 SRSRHRYDDYSRSPPYSSRHSRSRRRYEERSSRSSRAHDYDYEDLRDDDRSHERKRSRSR 224
Query: 339 -KSVPTKTDAPENPVRRAKESDMLNTRT 419
+ +K E R S + N T
Sbjct: 225 PRERSSKLSEEERDRRTVFVSQLANRLT 252
>SPAC29A4.06c |||human CCDC55 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 355
Score = 31.1 bits (67), Expect = 0.074
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 162 RKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQS-PEVQRKHDKPDNK 332
RK N+ RD++ R HK + +S SP+ + KR + S E+ ++ + +N+
Sbjct: 250 RKSSANNSMRDDKKRNHKSSYKRSLSPSTRYHQDRPDKRHGTYSLEEIDKQRKEFENR 307
>SPBP4H10.18c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 314
Score = 29.5 bits (63), Expect = 0.23
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +3
Query: 138 MESVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHD 317
++ EE +KK + + RD+R R + +S R+P N + R R E RK++
Sbjct: 62 IKETMEEKKKKSSSFEKRDKR-RVQLKEKSPLRTPRNRTQIIDARSTRKDTENESLRKNN 120
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.1 bits (62), Expect = 0.30
Identities = 18/77 (23%), Positives = 36/77 (46%)
Frame = +3
Query: 174 KNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQKSVPT 353
K+++ R KR++++ RS ++ ++ K S S E +NK+++S
Sbjct: 102 KDEELRKHAKGEGKRSKNRKRSSKHSEKQAVDLKSSNS-SQETSSSKGSVNNKSERSREA 160
Query: 354 KTDAPENPVRRAKESDM 404
K+ P+N K D+
Sbjct: 161 KSRMPKNSKEIKKGLDL 177
>SPAC12G12.11c |||DUF544 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 365
Score = 28.7 bits (61), Expect = 0.39
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 129 VLIMESVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQR 308
V ++ KEE +K+ K+D+ +R + R K +P +K + RR + + R
Sbjct: 301 VYVLNQRKEEKKKRAKDDEQYAKRLAKEEEERGKKETP----KKASNTPRRNKSNTQKSR 356
Query: 309 KHDK 320
K +
Sbjct: 357 KQSE 360
>SPCC18B5.11c |cds1||replication checkpoint kinase
Cds1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 28.7 bits (61), Expect = 0.39
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +1
Query: 193 MKGQDITNGLVLNHGHRRITAKKLLDVNVDILSHQRFKGNMINQIIKPKRVYRPKRMHLK 372
++G D+ + L+ N K LL ++ L H +G + ++ IKP+ + HLK
Sbjct: 251 VEGGDLMDFLIANGSIDEQDCKPLLKQLLETLLHLHKQG-VTHRDIKPENILITNDFHLK 309
Query: 373 IPYVALKKAI 402
I L K I
Sbjct: 310 ISDFGLAKVI 319
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 0.39
Identities = 16/62 (25%), Positives = 27/62 (43%)
Frame = +3
Query: 132 LIMESVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRK 311
L + S K +R + +D R H +RS+S SP N + + R + R+
Sbjct: 97 LALTSSKAANRSSTNTE--KDSRSIAHSTSRSRSTSPANRHRRKEKERTRSNHRHGSHRR 154
Query: 312 HD 317
H+
Sbjct: 155 HE 156
>SPCC162.01c |||RNA-binding protein |Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 28.7 bits (61), Expect = 0.39
Identities = 21/87 (24%), Positives = 38/87 (43%)
Frame = +3
Query: 141 ESVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDK 320
ESV+EES ++ + + H R R + R R++ R SPE + K
Sbjct: 71 ESVREESPRRPVEHERNWQPELKHGRERFRERDYEGRRDRKERRDGVSPFSPEGEGLERK 130
Query: 321 PDNKTQKSVPTKTDAPENPVRRAKESD 401
+++ + P+ + E PV + + D
Sbjct: 131 REHE-KLQAPSPKEEEERPVDQGDKMD 156
Score = 27.5 bits (58), Expect = 0.91
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 159 SRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKR-RYSQSPEVQRK 311
SR ++ DYR+ R Y S+ + R+ + R+R RY + E R+
Sbjct: 24 SRGDQRDRDYREYRRNYRDERSSRRYEDSQRRDYSPARRRDRYERHRESVRE 75
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 28.3 bits (60), Expect = 0.52
Identities = 17/46 (36%), Positives = 20/46 (43%)
Frame = +3
Query: 159 SRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSP 296
SRK YR R RS SRSP+ R + YS+SP
Sbjct: 735 SRKYRSRQRYRRSYAGSTSRGRSFSRSPSYRRRLSMSCSVSYSRSP 780
>SPBC428.07 |meu6||meiotic chromosome segregation protein
Meu6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 651
Score = 27.9 bits (59), Expect = 0.69
Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +3
Query: 189 RDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKP-DNKTQKSVPTKTDA 365
R+ERP + A + + + E +G ++ EV ++ D+ T+ +VP + A
Sbjct: 6 REERPE--QIAEPTFENVSEHNEHDSGSAEAQVETLEVPLSNETDNDDATENAVPAEVQA 63
Query: 366 PENP 377
PE P
Sbjct: 64 PEEP 67
>SPBC16E9.02c |||CUE domain protein Cue5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 569
Score = 27.5 bits (58), Expect = 0.91
Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 1/85 (1%)
Frame = +3
Query: 150 KEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNRE-KTTGRKRRYSQSPEVQRKHDKPD 326
K E+ K K D + + K ++ E K K + + S EV K +K D
Sbjct: 453 KTETDVKAKETDSIEANDKDEKTDSKETEDKVEETESKEADVKAKETDSIEVDDKEEKTD 512
Query: 327 NKTQKSVPTKTDAPENPVRRAKESD 401
+K +TD+ + + AK+ +
Sbjct: 513 SKETADKVEQTDSKDTNEKPAKDDN 537
>SPBC146.07 |prp2|mis11|U2AF large subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 26.6 bits (56), Expect = 1.6
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +3
Query: 186 YRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHD--KPDNKTQKSVPTKT 359
Y ERPR +R S R +RE R R + P +R++D +P + SV
Sbjct: 44 YGSERPRRRRRDESDFRRHRESRE----RSYREDERPRRERRYDDYEPRSLRYSSVGRSR 99
Query: 360 DAPENPVRRAK 392
P + R +
Sbjct: 100 SPPPSRERSVR 110
Score = 25.8 bits (54), Expect = 2.8
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 159 SRKKHKNDDYRDERPRYHKRARSKSR-SPTNNREKTTGRKRRYSQS 293
SR ++ DYRDE PR + + R P + R+RR +S
Sbjct: 12 SRIPKRHRDYRDEEPRRERGSGGIGREDPRGHYGSERPRRRRRDES 57
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 1.6
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +3
Query: 150 KEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKH--DKP 323
K ES KHK D + RP + +S+S +++ +K +S R H KP
Sbjct: 592 KHES--KHKRDSKHEARPESKHESHRESKSAEKDKKDKKDKKEDSKRS----RSHSVSKP 645
Query: 324 DNKTQKSVPTKTDA 365
D+ ++ +T A
Sbjct: 646 DSSKLRTWTDRTGA 659
Score = 25.4 bits (53), Expect = 3.7
Identities = 17/65 (26%), Positives = 26/65 (40%)
Frame = +3
Query: 129 VLIMESVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQR 308
V +M K SR + K D + H + SKS +EK R+ R + E +
Sbjct: 699 VELMTGKKVYSRTERKKDTQKQSHD--HGHSHSKSHDREKEKEKKKDREHRKHRETEEED 756
Query: 309 KHDKP 323
+ P
Sbjct: 757 EGPPP 761
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 26.6 bits (56), Expect = 1.6
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 1/65 (1%)
Frame = +3
Query: 228 KSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQKSVPTKTDAP-ENPVRRAKESDM 404
+S++ N E + K+ + + +KH K K +S DAP E+P S
Sbjct: 280 RSQNQLENHENSKKHKKNLRKMNQEIKKHAKEAQKNAESNKQPEDAPSESPYSNKVSSSD 339
Query: 405 LNTRT 419
TR+
Sbjct: 340 FYTRS 344
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 26.6 bits (56), Expect = 1.6
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = -3
Query: 384 DVRDFQVHPFWSVHSFGFYYLVYHVSFEPLVTENIYVY 271
DV+D V +H FG + Y FE L NI VY
Sbjct: 11 DVKDKPVARVVFIHGFGEHVNAYPEFFEALNERNIEVY 48
>SPBC16C6.10 |chp2||chromodomain protein 2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 2.1
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +3
Query: 153 EESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSP 296
E+S K + D+ + + S S S ++N EKT+G SQSP
Sbjct: 108 EDSEDKKEEDESSSYKNEFKS---SSSASVSSNFEKTSGSDDHNSQSP 152
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 25.8 bits (54), Expect = 2.8
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = +3
Query: 198 RPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQR--KHDKPDNKTQKSVPTKTDAPE 371
R R RA +S N + + RY PE++R +H +K+ K +
Sbjct: 344 RARASSRASIRSTREENRLKYLDSLRERYKHIPEIRRIARHRHLPTNVKKAAEIKRE-EI 402
Query: 372 NPVRRAKESDMLNTRTG 422
N ++R +E+ +++ G
Sbjct: 403 NSLKRREENIRRHSKKG 419
>SPAC1B9.03c ||SPAC6B12.01|RNA-binding protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 389
Score = 25.8 bits (54), Expect = 2.8
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +3
Query: 171 HKNDDYRDERPRYHKRARS-----KSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKT 335
HK+ + ++ +H+++R+ K N R K +KRR Q E +K D+
Sbjct: 319 HKSKEEIKQQDNFHEQSRALKEKRKKEQDENVRRKRENKKRRKDQKKEGITSSNKNDDSG 378
Query: 336 QKSVPTKTD 362
+ +D
Sbjct: 379 NEGSSAYSD 387
>SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1205
Score = 25.8 bits (54), Expect = 2.8
Identities = 13/66 (19%), Positives = 32/66 (48%)
Frame = +3
Query: 213 KRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQKSVPTKTDAPENPVRRAK 392
K SKS ++ R K R++ Q+P ++ ++ ++ Q ++AP + ++
Sbjct: 1130 KTHSSKSDKKSSRRRKNEKRRKLNEQNPNIRNVPERSSSRFQGIRINYSEAPSSSEEISE 1189
Query: 393 ESDMLN 410
E + ++
Sbjct: 1190 EEEEIS 1195
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 25.4 bits (53), Expect = 3.7
Identities = 18/70 (25%), Positives = 24/70 (34%)
Frame = +3
Query: 168 KHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQKSV 347
K N D R H R R P+ + G + SP V +KH + D+
Sbjct: 42 KDSNHDRRTSTDTTHSRHRYPETPPSLPPPPSPGI---LATSPAVLQKHQQEDSGNSSQS 98
Query: 348 PTKTDAPENP 377
PT P
Sbjct: 99 PTSPHPSNQP 108
>SPBP4H10.20 |nhm1|DcpS|m7G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 304
Score = 25.0 bits (52), Expect = 4.8
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 237 SPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQK 341
S T+ R+ ++ +KR ++PE+ K KP +TQ+
Sbjct: 102 SETHVRKYSSQKKRMVCETPEMYLKVTKPFIETQR 136
>SPBC244.02c |||U3 snoRNP-associated protein Utp6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 488
Score = 24.6 bits (51), Expect = 6.4
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +1
Query: 280 DILSHQRFKGNMINQIIKPKRVYRPK 357
D+L F + IN IIK +RV+ K
Sbjct: 18 DLLEKNIFNRDEINNIIKTRRVFEEK 43
>SPBC1718.03 |ker1||DNA-directed RNA polymerase I complex subunit
subunit Ker1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 147
Score = 24.6 bits (51), Expect = 6.4
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 135 IMESVKEESRK--KHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQR 308
++E+ +EES K + +NDD ++ K+ K + REK RK + + V
Sbjct: 86 MLETKEEESLKHAREENDDLHLDKET--KKRLKKEKKKAARREKEEARKAKADTTQGVGE 143
Query: 309 K 311
K
Sbjct: 144 K 144
>SPCC825.05c |||splicing coactivator SRRM1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 301
Score = 24.6 bits (51), Expect = 6.4
Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = +3
Query: 162 RKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEV-QRKHDKP 323
R+ + Y D R R KR + + + + RY +SP R +KP
Sbjct: 166 RESRRESTYYDSRERNGKRTSRSTLDRKRFHDASDTERNRYGRSPSPHSRFSEKP 220
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 24.6 bits (51), Expect = 6.4
Identities = 12/37 (32%), Positives = 17/37 (45%)
Frame = +3
Query: 141 ESVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNN 251
ES R +N + + P Y RS ++SP NN
Sbjct: 335 ESGHPRFRNSRRNYNNQGAYPTYMSNGRSANQSPRNN 371
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 24.6 bits (51), Expect = 6.4
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = +1
Query: 262 LLDVNVDILSHQRFKGNMINQI-IKPKRVYRPKRMHLKI 375
LLDV+ S+ R N+ N IKPK++++P + +I
Sbjct: 211 LLDVHSPDNSNHRTMLNINNSSPIKPKKIFKPNEVKNRI 249
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 24.6 bits (51), Expect = 6.4
Identities = 18/77 (23%), Positives = 26/77 (33%)
Frame = +3
Query: 144 SVKEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKP 323
SV S ++ND R S P+ + R+ S P H+
Sbjct: 144 SVSPISPSANRNDSKRQASSFRRSPPSSVHMKPSAFNGRKVSRRPSSSPPPIPSIPHETT 203
Query: 324 DNKTQKSVPTKTDAPEN 374
+ TQK + PEN
Sbjct: 204 SSDTQKKSSVSSGFPEN 220
>SPCC1450.10c |||iron hydrogenase large subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 538
Score = 24.6 bits (51), Expect = 6.4
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 162 RKKHKNDDYRDERPRYHKRARSKSRSPT 245
R+ H N R R KR RS +++PT
Sbjct: 412 RRVHGNSSVRKGRVLLKKRVRSNAQNPT 439
>SPAC22E12.11c |set3||histone lysine methyltransferase
Set3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 859
Score = 24.6 bits (51), Expect = 6.4
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 156 ESRKKHKNDDYRDERPRYHKRARSKSRSPTNNREKTTGR 272
++ K HK R +R R S+SRS N R + G+
Sbjct: 54 DADKAHKIQLARLQREEEQSRILSRSRSSNNKRRTSFGK 92
>SPAC644.12 |cdc5||cell division control protein
Cdc5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 757
Score = 24.6 bits (51), Expect = 6.4
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = +3
Query: 246 NNREKTTGRKRRYSQSPEVQRKHDKPDNKTQKSVPTKTDAPENPVRRAKESDMLNTR 416
NN ++ GRK + + P KP ++ +K P K DA E +RR E++ ++ R
Sbjct: 263 NNEMESEGRKFGHFEKP-------KPIDRVKK--PNK-DAQEEKMRRLAEAEQMSKR 309
>SPAC31F12.01 |zds1|SPAC637.14, mug88|zds family protein
Zds1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 938
Score = 24.6 bits (51), Expect = 6.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 309 KHDKPDNKTQKSVPTKTDAPENPVRRAKESDMLNT 413
K P+NK +KS +K PEN +A++S +L +
Sbjct: 446 KAPAPENKPEKSSTSKPPVPEN---KAEDSVVLKS 477
Score = 24.2 bits (50), Expect = 8.5
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +3
Query: 228 KSRSPTNNREKTTGRKRRYSQS-PE--VQRKHDKPDNKTQKSVPTKTDAPEN 374
KS P + E + K ++ PE + + P+NK + SV K+ PE+
Sbjct: 476 KSSVPEDKSENSIASKPSATEGIPENAIALQSSVPENKAEDSVVLKSSVPED 527
>SPCC1322.08 |srk1|mkp1|MAPK-activated protein kinase
Srk1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 580
Score = 24.2 bits (50), Expect = 8.5
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +3
Query: 150 KEESRKKHKNDDYRDERPRYHKRARSKSRSPTNNRE 257
K +SR H ++ + Y +RSK + PTN +E
Sbjct: 61 KPKSRHAHFHETVHENPSEY---SRSKCKQPTNEKE 93
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 24.2 bits (50), Expect = 8.5
Identities = 13/44 (29%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 162 RKKHKNDDYRDERPRYHKRARSKSRSPTNN-REKTTGRKRRYSQ 290
R + ++ Y D+R YHKR + +++ ++ R+K+ R+ RY +
Sbjct: 382 RNERFSNYYGDDRS-YHKRRNTGNKNCDDHLRDKSPERRYRYDR 424
>SPBC27B12.11c |||transcription factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 738
Score = 24.2 bits (50), Expect = 8.5
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +3
Query: 189 RDERPRYHKRARSKSRSPTNNREKTTGRKRRYSQSPEVQRKHDKPDNKTQKSVPTK 356
R +RP +R K S T+N K+T +S + K P + Q ++ ++
Sbjct: 323 RKKRPTGVRRGPYKKLSDTSNNTKSTTASSGHSTQDSLSSKMLDPSSDNQFAMSSR 378
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,575,922
Number of Sequences: 5004
Number of extensions: 31796
Number of successful extensions: 178
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 150383836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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