Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_L14
         (620 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118326-1|AAM48355.1|  119|Drosophila melanogaster LD19034p pro...    92   6e-19
AE014296-2345|AAN11822.1|  119|Drosophila melanogaster CG6513-PB...    92   6e-19
AE014296-2344|AAF49770.1|  119|Drosophila melanogaster CG6513-PA...    92   6e-19
BT012454-1|AAS93725.1|  902|Drosophila melanogaster RE64461p pro...    29   6.7  
AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH1217...    29   6.7  
AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA ...    29   6.7  

>AY118326-1|AAM48355.1|  119|Drosophila melanogaster LD19034p
           protein.
          Length = 119

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 47/71 (66%), Positives = 50/71 (70%)
 Frame = +3

Query: 258 RGPAGHSAFLQKRLAKGQKFFDSGDYQMAKQRPGNXXXXXXXXXXXXXXXTGDAIPTPDT 437
           R P GHSAFLQKRL KGQKFFDSGDYQMAKQ+ G                TG+AIPTP+T
Sbjct: 46  RVPGGHSAFLQKRLQKGQKFFDSGDYQMAKQKGGG-----VKQVFANKVTTGEAIPTPET 100

Query: 438 VPIRKTSIIQP 470
           VP RKTSIIQP
Sbjct: 101 VPARKTSIIQP 111


>AE014296-2345|AAN11822.1|  119|Drosophila melanogaster CG6513-PB,
           isoform B protein.
          Length = 119

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 47/71 (66%), Positives = 50/71 (70%)
 Frame = +3

Query: 258 RGPAGHSAFLQKRLAKGQKFFDSGDYQMAKQRPGNXXXXXXXXXXXXXXXTGDAIPTPDT 437
           R P GHSAFLQKRL KGQKFFDSGDYQMAKQ+ G                TG+AIPTP+T
Sbjct: 46  RVPGGHSAFLQKRLQKGQKFFDSGDYQMAKQKGGG-----VKQVFANKVTTGEAIPTPET 100

Query: 438 VPIRKTSIIQP 470
           VP RKTSIIQP
Sbjct: 101 VPARKTSIIQP 111


>AE014296-2344|AAF49770.1|  119|Drosophila melanogaster CG6513-PA,
           isoform A protein.
          Length = 119

 Score = 91.9 bits (218), Expect = 6e-19
 Identities = 47/71 (66%), Positives = 50/71 (70%)
 Frame = +3

Query: 258 RGPAGHSAFLQKRLAKGQKFFDSGDYQMAKQRPGNXXXXXXXXXXXXXXXTGDAIPTPDT 437
           R P GHSAFLQKRL KGQKFFDSGDYQMAKQ+ G                TG+AIPTP+T
Sbjct: 46  RVPGGHSAFLQKRLQKGQKFFDSGDYQMAKQKGGG-----VKQVFANKVTTGEAIPTPET 100

Query: 438 VPIRKTSIIQP 470
           VP RKTSIIQP
Sbjct: 101 VPARKTSIIQP 111


>BT012454-1|AAS93725.1|  902|Drosophila melanogaster RE64461p
           protein.
          Length = 902

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 423 PTPDTVPIRKTSIIQPK--FSTPSQT 494
           PTP  VP++K + I PK  FS P QT
Sbjct: 772 PTPSIVPVKKDTPILPKQPFSDPVQT 797


>AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH12174
           protein.
          Length = 1189

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 423 PTPDTVPIRKTSIIQPK--FSTPSQT 494
           PTP  VP++K + I PK  FS P QT
Sbjct: 273 PTPSIVPVKKDTPILPKQPFSDPVQT 298


>AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA
           protein.
          Length = 1688

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
 Frame = +3

Query: 423 PTPDTVPIRKTSIIQPK--FSTPSQT 494
           PTP  VP++K + I PK  FS P QT
Sbjct: 772 PTPSIVPVKKDTPILPKQPFSDPVQT 797


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,582,467
Number of Sequences: 53049
Number of extensions: 515753
Number of successful extensions: 1027
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1024
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2559155400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)