Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_L08
         (475 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    26   0.58 
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   1.0  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   1.0  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   1.3  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    25   1.8  
AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcript...    25   1.8  
AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.            23   7.2  

>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 26.2 bits (55), Expect = 0.58
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 173 WGRHITKNIAKGLNKTQAPNHAMRNHVGKKV 81
           W  H+T  + K     +   + MRNH G +V
Sbjct: 747 WRPHVTMAVEKANRVVKVVTNVMRNHSGPRV 777


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1168

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 176 NWGRHITKNIAKGLNKTQAPNHAMRNHVGKKVTCSNIAYTISA 48
           +W  H+     K L   +A    MRNH G +V+   +   ++A
Sbjct: 752 SWRPHVEMVADKALRVVRALRGIMRNHSGPQVSKRKLLAAVAA 794


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 25.4 bits (53), Expect = 1.0
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 176 NWGRHITKNIAKGLNKTQAPNHAMRNHVGKKV 81
           +W  H+  + AK L         MRNH G +V
Sbjct: 749 SWKPHVELSTAKALRVVGVVTAVMRNHSGPQV 780


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.0 bits (52), Expect = 1.3
 Identities = 11/42 (26%), Positives = 20/42 (47%)
 Frame = -3

Query: 176 NWGRHITKNIAKGLNKTQAPNHAMRNHVGKKVTCSNIAYTIS 51
           +W  H+T    + +   QA    M NH G K++ S +   ++
Sbjct: 762 SWIPHVTAVTQRAVQIAQAVGRLMPNHRGPKMSKSRLLAAVA 803


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/36 (30%), Positives = 15/36 (41%)
 Frame = -3

Query: 173 WGRHITKNIAKGLNKTQAPNHAMRNHVGKKVTCSNI 66
           W  H+TK   K      A    M+NH G +   S +
Sbjct: 803 WRDHVTKVSEKASRVVAAVTRLMQNHSGPRTAKSRL 838


>AB090822-2|BAC57920.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = -3

Query: 176 NWGRHITKNIAKGLNKTQAPNHAMRNHVGKK 84
           +W  H+     K L   +A    MRNH G K
Sbjct: 763 SWKSHVEYCTTKALRTAKALGCLMRNHSGPK 793


>AF444780-1|AAL37901.1| 1152|Anopheles gambiae Toll protein.
          Length = 1152

 Score = 22.6 bits (46), Expect = 7.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 138 PFRDILCDMSTPIT 179
           P R++LC++ TP T
Sbjct: 649 PTRELLCELDTPST 662


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 372,879
Number of Sequences: 2352
Number of extensions: 5624
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41670678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)