Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_L04
(537 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 124 5e-29
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 124 5e-29
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 111 3e-25
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 111 3e-25
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 89 2e-18
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 89 2e-18
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 89 2e-18
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 71 5e-13
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 71 5e-13
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 71 5e-13
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 61 4e-10
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 60 8e-10
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 58 5e-09
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 58 5e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 57 9e-09
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 57 9e-09
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 57 9e-09
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 57 9e-09
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 57 9e-09
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 57 9e-09
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 57 9e-09
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 56 1e-08
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 56 1e-08
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 54 7e-08
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 54 7e-08
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 54 9e-08
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 53 2e-07
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 52 2e-07
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 52 2e-07
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 52 3e-07
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 52 3e-07
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 52 3e-07
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 51 5e-07
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 50 1e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 49 2e-06
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 48 3e-06
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 47 1e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 47 1e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 46 1e-05
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 46 1e-05
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 46 1e-05
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 46 2e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 46 2e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 45 3e-05
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 45 4e-05
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 45 4e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 5e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 44 7e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 44 7e-05
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 44 7e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 9e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 43 2e-04
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 43 2e-04
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 42 2e-04
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 42 4e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 41 6e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 41 6e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 39 0.002
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 39 0.002
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 39 0.002
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 38 0.003
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 38 0.003
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 38 0.003
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 38 0.003
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 37 0.008
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 37 0.008
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 36 0.014
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 36 0.014
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.018
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.024
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.032
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 35 0.032
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 35 0.032
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 35 0.043
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.056
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.056
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.056
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 34 0.056
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 34 0.056
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 34 0.075
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 33 0.099
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 33 0.17
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 32 0.23
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.40
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 0.40
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.40
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 31 0.40
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.40
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 31 0.40
Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical pr... 31 0.53
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 1.2
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.8
CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 2.8
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 27 6.5
AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical ... 27 6.5
L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical pr... 27 8.6
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 27 8.6
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 124 bits (298), Expect = 5e-29
Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Frame = +1
Query: 106 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESIN 285
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ YGE+
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 286 VKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSS 462
VK D GRSRGFAF+ F + +AA E TI K V+ K AK+R K+FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 463 EISDDEIKNFFSNFGNIIEVEMPFD 537
+ S+ ++++ F FG + ++E PFD
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPFD 144
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 366
+++K+FVGGL + S+++LR HF +G+++ I D T R FAFIVF+ +S DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 367 MAAGEHTINSKKVDPKKAKARHGKIFVG 450
+ + T +++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 124 bits (298), Expect = 5e-29
Identities = 60/145 (41%), Positives = 91/145 (62%), Gaps = 1/145 (0%)
Frame = +1
Query: 106 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESIN 285
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ YGE+
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 286 VKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSS 462
VK D GRSRGFAF+ F + +AA E TI K V+ K AK+R K+FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 463 EISDDEIKNFFSNFGNIIEVEMPFD 537
+ S+ ++++ F FG + ++E PFD
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPFD 144
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 366
+++K+FVGGL + S+++LR HF +G+++ I D T R FAFIVF+ +S DK
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 367 MAAGEHTINSKKVDPKKAKARHGKIFVG 450
+ + T +++ D KKA GK F G
Sbjct: 168 SSQTKQTFGTRECDVKKA-VPQGKRFPG 194
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 111 bits (267), Expect = 3e-25
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 9/136 (6%)
Frame = +1
Query: 157 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 336
D+ + G D K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 337 FKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKN 489
F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+ + +++K
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 490 FFSNFGNIIEVEMPFD 537
+F +G + + + FD
Sbjct: 153 YFETYGKVEDAMLMFD 168
Score = 64.9 bits (151), Expect = 3e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +1
Query: 88 FAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDD------DRKLFVGGLSWETSDKELRD 249
F + D LN G D P R +K+F+GGLS ++ ++++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 250 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
+F YG++E + D T R RGF F+ F + + DKV H IN K V+ KKA+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 34.7 bits (76), Expect = 0.043
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 379 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
E +N+ D GK+F+GGLS + + + ++++F FG + E
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 73
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 111 bits (267), Expect = 3e-25
Identities = 52/136 (38%), Positives = 81/136 (59%), Gaps = 9/136 (6%)
Frame = +1
Query: 157 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 336
D+ + G D K+F+GGLSW+T+ + LRD+F +GE+ V DP T R+RGF FI
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 337 FKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKN 489
F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+ + +++K
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 490 FFSNFGNIIEVEMPFD 537
+F +G + + + FD
Sbjct: 153 YFETYGKVEDAMLMFD 168
Score = 64.9 bits (151), Expect = 3e-11
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Frame = +1
Query: 88 FAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDD------DRKLFVGGLSWETSDKELRD 249
F + D LN G D P R +K+F+GGLS ++ ++++
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 250 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
+F YG++E + D T R RGF F+ F + + DKV H IN K V+ KKA+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 34.7 bits (76), Expect = 0.043
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 379 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
E +N+ D GK+F+GGLS + + + ++++F FG + E
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNE 73
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 89.0 bits (211), Expect = 2e-18
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Frame = +1
Query: 130 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 309
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 310 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 456
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 457 SSEISDDEIKNFFSNFGNIIEVEMPFD 537
+ ++D + +F+ +G + + E+ D
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILD 148
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
F DS+D+ + H +N + D +K ++
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 89.0 bits (211), Expect = 2e-18
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Frame = +1
Query: 130 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 309
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 310 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 456
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 457 SSEISDDEIKNFFSNFGNIIEVEMPFD 537
+ ++D + +F+ +G + + E+ D
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILD 148
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
F DS+D+ + H +N + D +K ++
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 89.0 bits (211), Expect = 2e-18
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 11/147 (7%)
Frame = +1
Query: 130 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTG 309
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +GEI I V DP T
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 310 RSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 456
RSRGF F+ F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 457 SSEISDDEIKNFFSNFGNIIEVEMPFD 537
+ ++D + +F+ +G + + E+ D
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILD 148
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 101 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 160
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
F DS+D+ + H +N + D +K ++
Sbjct: 161 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 192
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 70.9 bits (166), Expect = 5e-13
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 372
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 373 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 495
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 496 SNFGNIIEVEM 528
FG + +VE+
Sbjct: 169 ETFGTLDQVEI 179
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 70.9 bits (166), Expect = 5e-13
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 372
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 373 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 495
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 496 SNFGNIIEVEM 528
FG + +VE+
Sbjct: 189 ETFGTLDQVEI 199
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 70.9 bits (166), Expect = 5e-13
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA 372
RKLF+GGLS +T+D++L ++FS +G + V DPNT SRGF F+ F + S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 373 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 495
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 496 SNFGNIIEVEM 528
FG + +VE+
Sbjct: 190 ETFGTLDQVEI 200
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 70.9 bits (166), Expect = 5e-13
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Frame = +1
Query: 241 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 420
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 421 KARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
R K ++V G+ + ++D + +F+ +G + + E+ D
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 110
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
F DS+D+ + H +N + D +K ++
Sbjct: 123 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 70.9 bits (166), Expect = 5e-13
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 11/110 (10%)
Frame = +1
Query: 241 LRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKA 420
+R+ +S +GEI I V DP T RSRGF F+ F +D M H I+ K VDPK+A
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 421 KARHGK-----------IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
R K ++V G+ + ++D + +F+ +G + + E+ D
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILD 110
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/92 (23%), Positives = 47/92 (51%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+D+ + ++L+V G+ + ++ L ++F+ YG + + D T + RGF F+
Sbjct: 63 RDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFV 122
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
F DS+D+ + H +N + D +K ++
Sbjct: 123 TFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSK 154
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 61.3 bits (142), Expect = 4e-10
Identities = 27/80 (33%), Positives = 45/80 (56%)
Frame = +1
Query: 169 EAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 348
EA ++ + +++ + W T +L +F YG I+S+N+ DP+TG RGFA I F +
Sbjct: 17 EARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSK 76
Query: 349 DSIDKVMAAGEHTINSKKVD 408
D +K + H I+ +VD
Sbjct: 77 DGANKAIEQRPHVIDGDRVD 96
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 60.5 bits (140), Expect = 8e-10
Identities = 28/71 (39%), Positives = 42/71 (59%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
K+FVGGL + TSDK L ++F +G+IE V TD NT +SRG+ F+ K S ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 376 GEHTINSKKVD 408
I+ +K +
Sbjct: 96 PNPIIDGRKAN 106
Score = 31.5 bits (68), Expect = 0.40
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIE 519
KIFVGGL SD + +F FG+I E
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEE 63
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 57.6 bits (133), Expect = 5e-09
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +1
Query: 109 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 273
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 136 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
Query: 274 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----- 438
E +++KT NT +AF++F+ D + A E + + K +GK
Sbjct: 196 EEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSR 251
Query: 439 -IFVGGLSSEISDDEIKNFFSNFGNIIEVE 525
+FVGGL S + ++ F FG + ++
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 57.6 bits (133), Expect = 5e-09
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +1
Query: 109 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 273
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 136 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 195
Query: 274 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----- 438
E +++KT NT +AF++F+ D + A E + + K +GK
Sbjct: 196 EEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSR 251
Query: 439 -IFVGGLSSEISDDEIKNFFSNFGNIIEVE 525
+FVGGL S + ++ F FG + ++
Sbjct: 252 RLFVGGLGSWCDKEILQKAFGEFGFVENID 281
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 57.6 bits (133), Expect = 5e-09
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +1
Query: 109 DNQLNGNSEHG--GGDGQDNSAEAPGRDDD---RKLFVGGLSWETSDKELRDHFSAYGEI 273
D++ G S G G ++ S +DDD R LFVG + + ++E+R F +G++
Sbjct: 113 DSKREGGSGSGNRGRPTKEPSTWRLKQDDDEATRTLFVGNMPSDVKEREIRHVFEEHGKV 172
Query: 274 ESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK----- 438
E +++KT NT +AF++F+ D + A E + + K +GK
Sbjct: 173 EEVDIKTPINT--DAAYAFVMFQTVD--QAIQAKAEEQDRPIRAGGSRMKIGYGKSQVSR 228
Query: 439 -IFVGGLSSEISDDEIKNFFSNFGNIIEVE 525
+FVGGL S + ++ F FG + ++
Sbjct: 229 RLFVGGLGSWCDKEILQKAFGEFGFVENID 258
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 39.9 bits (89), Expect = 0.001
Identities = 19/45 (42%), Positives = 32/45 (71%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRG 321
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRG 183
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 56.8 bits (131), Expect = 9e-09
Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSID- 360
D K+FVG + + ++ + R F YG + S N+ D +T S+G F+ F D+I+
Sbjct: 53 DAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEA 112
Query: 361 -------KVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNI 513
KV+ H + K D + R K+F+G LS + +++ ++ F+ FG+I
Sbjct: 113 QGALHNIKVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHI 168
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++RKLF+G LS + +++ LR+ F+ +G IE +V D + G+SRG AF+ F
Sbjct: 140 NERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQD-GKSRGCAFVTF 189
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Frame = +1
Query: 175 PGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 351
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ + D
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 352 S----------------IDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI 483
S +++ M +S+ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 484 KNFFSNFGNIIEV 522
+ F+ FG + EV
Sbjct: 141 RALFATFGELDEV 153
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 148 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFA 327
D A + DD+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G A
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCA 167
Query: 328 FIVFK 342
F+ +K
Sbjct: 168 FVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 56.4 bits (130), Expect = 1e-08
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Frame = +1
Query: 175 PGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 351
P +D D KLFVG + +K+LR F +G+I + D TG +G AF+ + D
Sbjct: 22 PVKDPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRD 81
Query: 352 S----------------IDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI 483
S +++ M +S+ PK K K+F+G LS + S+DE+
Sbjct: 82 SAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDEV 140
Query: 484 KNFFSNFGNIIEV 522
+ F+ FG + EV
Sbjct: 141 RALFATFGELDEV 153
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +1
Query: 148 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFA 327
D A + DD+KLF+G LS + S+ E+R F+ +GE++ + V + G S+G A
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCA 167
Query: 328 FIVFK 342
F+ +K
Sbjct: 168 FVKYK 172
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 56.0 bits (129), Expect = 2e-08
Identities = 36/133 (27%), Positives = 64/133 (48%)
Frame = +1
Query: 97 DITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIE 276
+I N++N G G + D +++GGLS+ S+ ++ FS YGE+
Sbjct: 6 NIKNQNRMNERELSLGYAGDLKKSWHQTYKDSAWIYIGGLSYALSEGDVIAVFSQYGEVM 65
Query: 277 SINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGL 456
+IN+ D +TG+S+GFAF+ +K D ++A N + + + H + +
Sbjct: 66 NINLIRDKDTGKSKGFAFLCYK--DQRSTILAV--DNFNGISLHKRMIRVDHVEEYKVPK 121
Query: 457 SSEISDDEIKNFF 495
E +DDE K +
Sbjct: 122 YKEDADDETKRLW 134
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
I++GGLS +S+ ++ FS +G ++ + +
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINL 69
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 375
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 376 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
++ K + DP ++ G IF+ L I + I + FS FGNI+ ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 535 D 537
D
Sbjct: 154 D 154
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPK 414
F+ P+ + +NSK V K
Sbjct: 363 CFEKPEEATSAVT----EMNSKMVCSK 385
Score = 30.7 bits (66), Expect = 0.69
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 26/121 (21%)
Frame = +1
Query: 253 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID-KVMAAGEHTIN------------ 393
F+ +G I S V T G+S+GF F+ F P+ + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 394 ---------SKKVDPKKA----KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
KK + KA K + ++V L + DD +K F ++GNI ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 535 D 537
D
Sbjct: 351 D 351
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 54.0 bits (124), Expect = 7e-08
Identities = 36/121 (29%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 375
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDTM 93
Query: 376 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
++ K + DP ++ G IF+ L I + I + FS FGNI+ ++
Sbjct: 94 NFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAI 153
Query: 535 D 537
D
Sbjct: 154 D 154
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 304 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 362
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPK 414
F+ P+ + +NSK V K
Sbjct: 363 CFEKPEEATSAVT----EMNSKMVCSK 385
Score = 30.7 bits (66), Expect = 0.69
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 26/121 (21%)
Frame = +1
Query: 253 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID-KVMAAGEHTIN------------ 393
F+ +G I S V T G+S+GF F+ F P+ + V A + TI
Sbjct: 233 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 290
Query: 394 ---------SKKVDPKKA----KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
KK + KA K + ++V L + DD +K F ++GNI ++
Sbjct: 291 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 350
Query: 535 D 537
D
Sbjct: 351 D 351
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 53.6 bits (123), Expect = 9e-08
Identities = 20/81 (24%), Positives = 44/81 (54%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK 342
+AE + D R ++VG + W+++ E+ +HF+ G++ + + D TG + FAF+ F+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
Query: 343 APDSIDKVMAAGEHTINSKKV 405
+S+ + ++K+
Sbjct: 96 KLESVQLALVLSGTMFRNRKI 116
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/62 (43%), Positives = 40/62 (64%), Gaps = 2/62 (3%)
Frame = +1
Query: 160 NSAEAPGRDDD--RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
N AE P +D R LFVG +++ETS+ +LR F AYG+I+ + + D G+ RG+AFI
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFI 149
Query: 334 VF 339
+
Sbjct: 150 EY 151
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 52.4 bits (120), Expect = 2e-07
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +1
Query: 142 GGDGQDNSAEAPGRDDDR-KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSR 318
G DG+ A RD L V G+ ++T+D+ + +F G + +K + G S+
Sbjct: 155 GRDGRSGRKRAVERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSK 213
Query: 319 GFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARH-------GKIFVGGLSSEISDD 477
GF F+ + +KV+A +H I+ ++ D K R +IFVG L+ ++ +
Sbjct: 214 GFGFVRMSSVGEQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEH 273
Query: 478 EIKNFFSN 501
+++ F +
Sbjct: 274 QLRKVFGD 281
Score = 37.5 bits (83), Expect = 0.006
Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +1
Query: 148 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFS--AYGEIESINVKTDPNTGRS-R 318
DG+D GR ++FVG L+ + + +LR F A IE+ V TD + R
Sbjct: 248 DGRDKQ----GRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYIETA-VVTDVFIPKPFR 302
Query: 319 GFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
GFAF+ + ++ +++++ G T+N V A+ R
Sbjct: 303 GFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPR 339
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Frame = +1
Query: 181 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 360
R+ D ++VGGL + S+ L + G + S+N+ D T +GF F+ F + D
Sbjct: 9 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 68
Query: 361 -KVMAAGEHTINSKKVDPKKAKARH------GKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
+ + K + KA A IFVG L E+ + + + FS FG I++
Sbjct: 69 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 128
Query: 520 V 522
V
Sbjct: 129 V 129
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVF 339
SA D +FVG L E +K L D FSA+G I + + D ++G S+GFAFI F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 340 KAPDSIDKVMAA 375
+ ++ D + A
Sbjct: 150 ASFEASDTALEA 161
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
I+VGGL ++S+ + G ++ V MP D
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKD 47
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 52.4 bits (120), Expect = 2e-07
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Frame = +1
Query: 181 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 360
R+ D ++VGGL + S+ L + G + S+N+ D T +GF F+ F + D
Sbjct: 19 RNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDAD 78
Query: 361 -KVMAAGEHTINSKKVDPKKAKARH------GKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
+ + K + KA A IFVG L E+ + + + FS FG I++
Sbjct: 79 YAIKILNMIKLYGKPIKVNKASAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQ 138
Query: 520 V 522
V
Sbjct: 139 V 139
Score = 47.2 bits (107), Expect = 7e-06
Identities = 27/72 (37%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI-NVKTDPNTGRSRGFAFIVF 339
SA D +FVG L E +K L D FSA+G I + + D ++G S+GFAFI F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 340 KAPDSIDKVMAA 375
+ ++ D + A
Sbjct: 160 ASFEASDTALEA 171
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
I+VGGL ++S+ + G ++ V MP D
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKD 57
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 378
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 379 EHTINSKKVDPK 414
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 375
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 376 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
I+ + + DP +A +G IF+ L I + + + FS FGNI+ ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 535 D 537
D
Sbjct: 179 D 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK--- 342
A R + +F+ L +K + D FS +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 343 -APDSIDKV--MAAGEHTINSKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIKN 489
A +I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 490 FFSNFGNI 513
FS FG I
Sbjct: 257 MFSKFGEI 264
Score = 33.5 bits (73), Expect = 0.099
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 26/139 (18%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI------- 357
+FV ++L FS +GEI S V TD G+ +GF F+ F D+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 358 -DKVMAAGEHTINSKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 480
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 481 IKNFFSNFGNIIEVEMPFD 537
+++ FS+FG I ++ D
Sbjct: 359 LRDHFSSFGTITSAKVMVD 377
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 51.6 bits (118), Expect = 3e-07
Identities = 28/72 (38%), Positives = 40/72 (55%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 378
L+V + + +D LRDHFS++G I S V D N GRS+GF F+ F+ P+ A
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKPEE----ATAA 399
Query: 379 EHTINSKKVDPK 414
+NSK + K
Sbjct: 400 VTDMNSKMIGAK 411
Score = 51.2 bits (117), Expect = 5e-07
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM-AA 375
L++G L + S+ L + FS G + SI V D + S G+A++ F+ P ++ +
Sbjct: 59 LYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAYVNFQQPADAERALDTM 118
Query: 376 GEHTINSKKV-------DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
I+ + + DP +A +G IF+ L I + + + FS FGNI+ ++
Sbjct: 119 NFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVAT 178
Query: 535 D 537
D
Sbjct: 179 D 179
Score = 42.7 bits (96), Expect = 2e-04
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK--- 342
A R + +F+ L +K + D FS +G I S V TD + G S+G+ F+ F+
Sbjct: 138 AARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATD-DEGNSKGYGFVHFETEH 196
Query: 343 -APDSIDKV--MAAGEHTINSKKVDPKKAKAR--------HGKIFVGGLSSEISDDEIKN 489
A +I+KV M + + K P+ + + + +FV + +++
Sbjct: 197 SAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSA 256
Query: 490 FFSNFGNI 513
FS FG I
Sbjct: 257 MFSKFGEI 264
Score = 33.5 bits (73), Expect = 0.099
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 26/139 (18%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI------- 357
+FV ++L FS +GEI S V TD G+ +GF F+ F D+
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFADQDAAGQAVEKL 298
Query: 358 -DKVMAAGEHTINSKKVDPKKAKARHGK------------------IFVGGLSSEISDDE 480
D ++ + ++ + K ++ K ++V + +++DD
Sbjct: 299 NDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDDG 358
Query: 481 IKNFFSNFGNIIEVEMPFD 537
+++ FS+FG I ++ D
Sbjct: 359 LRDHFSSFGTITSAKVMVD 377
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 25/136 (18%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 354
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 355 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 480
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 481 IKNFFSNFGNIIEVEM 528
+K+ F FG I++ ++
Sbjct: 223 LKSVFEAFGEIVKCQL 238
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 372
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 25/136 (18%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 354
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 355 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 480
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 481 IKNFFSNFGNIIEVEM 528
+K+ F FG I++ ++
Sbjct: 223 LKSVFEAFGEIVKCQL 238
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 372
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 51.6 bits (118), Expect = 3e-07
Identities = 34/136 (25%), Positives = 70/136 (51%), Gaps = 25/136 (18%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP-------DS 354
+++VG +S+E + LR F +G I+SIN+ DP TG + FAF+ ++ P +S
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 355 IDKVMAAGEH-TINS------------KKVDP-----KKAKARHGKIFVGGLSSEISDDE 480
++ M G + +NS + P +K ++ +++V + ++S+ +
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 481 IKNFFSNFGNIIEVEM 528
+K+ F FG I++ ++
Sbjct: 223 LKSVFEAFGEIVKCQL 238
Score = 31.1 bits (67), Expect = 0.53
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRS-RGFAFIVFKAPDSIDKVMA 372
+++V + + S+ +L+ F A+GEI + P TGR RGF ++ F S + +A
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAP-TGRGHRGFGYLEFNNLTSQSEAIA 266
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 51.2 bits (117), Expect = 5e-07
Identities = 27/72 (37%), Positives = 38/72 (52%)
Frame = +1
Query: 124 GNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPN 303
G GGG G++ + + L V LS T++K+LRD F +GEI ++ D
Sbjct: 53 GGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRP 112
Query: 304 TGRSRGFAFIVF 339
+G SRGF FI F
Sbjct: 113 SGNSRGFGFIYF 124
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 50.8 bits (116), Expect = 6e-07
Identities = 34/132 (25%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA- 375
+FVG LS + S++ L+ F+ +GE+ V D T +S+G+ F+ F + + +A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 376 -----GEHTI--------NSKKVDPK--------KAKARHGKIFVGGLSSEISDDEIKNF 492
G+ + NS++ K KA + ++VG +S + +D ++++
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 493 FSNFGNIIEVEM 528
FS +G+I EV +
Sbjct: 257 FSTYGDIAEVRI 268
Score = 38.3 bits (85), Expect = 0.003
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINV 288
D+ ++VG +S +T+D +LRD FS YG+I + +
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRI 268
Score = 35.9 bits (79), Expect = 0.018
Identities = 13/49 (26%), Positives = 31/49 (63%)
Frame = +1
Query: 382 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
H+ + ++ + ++H +FVG LS ++S++ +K+ F+ FG + E ++
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKV 166
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 50.8 bits (116), Expect = 6e-07
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +1
Query: 190 DRKLFVGGLSWETSDKELRDHFSAY-GEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 366
D +FVG L +E ++ L FSA G +E++ + D +TG+ +GFAF+ FK S+
Sbjct: 245 DMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS-- 302
Query: 367 MAAGEHTINSKKVDPKKAK 423
+A TI +K D + K
Sbjct: 303 LALSMETIKMEKRDLRITK 321
Score = 40.3 bits (90), Expect = 9e-04
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVK-------------- 291
Q ++A A ++ +FVG + ++K +R FS +G I S+ ++
Sbjct: 130 QKSNARASAAENALTVFVGNMPLTMNEKSVRRIFSDFGTISSVRMRNLLPANEKLTKRVT 189
Query: 292 --TDPNTGRSRGFAFIV-FKAPDSIDKVMAAG-----EHTINSKKVDPKKAK-ARHGKIF 444
T + F V F A +S++K + +H I KV KK + + IF
Sbjct: 190 HLTGKLNDKQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAIF 249
Query: 445 VGGLSSEISDDEIKNFFS 498
VG L EI++D + FFS
Sbjct: 250 VGNLPFEITEDALITFFS 267
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
+FVG + +++ ++ FS+FG I V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 50.0 bits (114), Expect = 1e-06
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGR-SRGFAFIVF--- 339
APG +D R +FV L + T++ E+R A + SI N+ RGFA++V
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIRQ---AIEGVASIRFARKANSDLVHRGFAYVVMEND 642
Query: 340 -KAPDSI--DKVMAAGEHTINSKKVDPKK-------AKARHGKIFVGGLSSEISDDEIKN 489
KA ++ D+V G S DP+K K+FV + + +DDE+K
Sbjct: 643 QKAQQALLKDRVPVKGRPMFISAN-DPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKA 701
Query: 490 FFSNFGNIIEV 522
FS FG + V
Sbjct: 702 LFSKFGTVTSV 712
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 49.6 bits (113), Expect = 1e-06
Identities = 21/57 (36%), Positives = 36/57 (63%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 369
++VG ++T+++EL + FS+ G+I ++ + D TGR RGFAFI F S + +
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAV 63
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
++VG + +++E+ NFFS+ G I V + D
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCD 39
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 49.2 bits (112), Expect = 2e-06
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 169 EAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 348
E D + ++VG + + + +E+ HF G + + ++ D +G +GFA++ F
Sbjct: 70 EEKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEK 129
Query: 349 DSIDKVMAAGEHTINSK--KVDPKK 417
+ + +A + + + KVDPK+
Sbjct: 130 EGMQNALAMTDSLLRGRQIKVDPKR 154
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 372
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 373 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 480
G TI N K D + + ++VG ++S +++DE
Sbjct: 84 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 142
Query: 481 IKNFFSNFGNIIEVEM 528
I+ F++FG I EV +
Sbjct: 143 IRQGFASFGRITEVRI 158
Score = 33.5 bits (73), Expect = 0.099
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
RH +FVG LSSE+ + +++ F FG++ + ++
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 53
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 372
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 373 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 480
G TI N K D + + ++VG ++S +++DE
Sbjct: 94 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 152
Query: 481 IKNFFSNFGNIIEVEM 528
I+ F++FG I EV +
Sbjct: 153 IRQGFASFGRITEVRI 168
Score = 33.5 bits (73), Expect = 0.099
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
RH +FVG LSSE+ + +++ F FG++ + ++
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 63
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 372
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 373 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 480
G TI N K D + + ++VG ++S +++DE
Sbjct: 197 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 255
Query: 481 IKNFFSNFGNIIEVEM 528
I+ F++FG I EV +
Sbjct: 256 IRQGFASFGRITEVRI 271
Score = 41.5 bits (93), Expect = 4e-04
Identities = 31/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF------ 339
G D+ R L+VG L ++ + F+ G + V D G + +AF+ F
Sbjct: 41 GSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFD---GSNDPYAFVEFSDHGQA 97
Query: 340 -KAPDSIDKVMAAGEHTINSKKVDPKKAKA-----RHGKIFVGGLSSEISDDEIKNFFSN 501
+A +++K + + V+P + ++ RH +FVG LSSE+ + +++ F
Sbjct: 98 SQALQTMNKRLLLDREMKVNWAVEPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQP 157
Query: 502 FGNIIEVEM 528
FG++ + ++
Sbjct: 158 FGDVSDAKV 166
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 48.4 bits (110), Expect = 3e-06
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 26/136 (19%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMA-- 372
+FVG LS E +++LR+ F +G++ V D NT +S+G+ F+ + + ++ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 373 ----AGEHTI------------------NSKKVDP--KKAKARHGKIFVGGLSSEISDDE 480
G TI N K D + + ++VG ++S +++DE
Sbjct: 165 NGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDNTSVYVGNIAS-LTEDE 223
Query: 481 IKNFFSNFGNIIEVEM 528
I+ F++FG I EV +
Sbjct: 224 IRQGFASFGRITEVRI 239
Score = 33.5 bits (73), Expect = 0.099
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
RH +FVG LSSE+ + +++ F FG++ + ++
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKV 134
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 244 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 302
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPK 414
F+ P+ + +NSK V K
Sbjct: 303 CFEKPEEATSAVT----EMNSKMVCSK 325
Score = 37.9 bits (84), Expect = 0.005
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 369
L+VG L + ++ L + FSA G + SI V D T S G+A++ F+ P ++ M
Sbjct: 34 LYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Score = 30.7 bits (66), Expect = 0.69
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 26/121 (21%)
Frame = +1
Query: 253 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID-KVMAAGEHTIN------------ 393
F+ +G I S V T G+S+GF F+ F P+ + V A + TI
Sbjct: 173 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 230
Query: 394 ---------SKKVDPKKA----KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
KK + KA K + ++V L + DD +K F ++GNI ++
Sbjct: 231 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 290
Query: 535 D 537
D
Sbjct: 291 D 291
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/87 (33%), Positives = 41/87 (47%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
+ + AE + L+V L D L+ F +YG I S V TD N GRS+GF F+
Sbjct: 241 EQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFV 299
Query: 334 VFKAPDSIDKVMAAGEHTINSKKVDPK 414
F+ P+ + +NSK V K
Sbjct: 300 CFEKPEEATSAVT----EMNSKMVCSK 322
Score = 32.3 bits (70), Expect = 0.23
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 406 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
DP ++ G IF+ L I + I + FS FGNI+ ++ D
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID 91
Score = 30.7 bits (66), Expect = 0.69
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 26/121 (21%)
Frame = +1
Query: 253 FSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID-KVMAAGEHTIN------------ 393
F+ +G I S V T G+S+GF F+ F P+ + V A + TI
Sbjct: 170 FAKFGNITSCEVMTVE--GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQ 227
Query: 394 ---------SKKVDPKKA----KARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPF 534
KK + KA K + ++V L + DD +K F ++GNI ++
Sbjct: 228 KKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMT 287
Query: 535 D 537
D
Sbjct: 288 D 288
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 46.4 bits (105), Expect = 1e-05
Identities = 28/112 (25%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF-KAPDSIDKVMAA 375
L + L + +E+R F++ GEIES + D TG+S G+ F+ + + D++ V +
Sbjct: 44 LIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVSSF 103
Query: 376 GEHTINSKKVD-----PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNII 516
+ +K + P + + ++V G+ ++ E+++ F FG II
Sbjct: 104 NGLRLQNKTIKVSYARPSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQII 155
Score = 33.9 bits (74), Expect = 0.075
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 360
L+V G+ + EL F +G+I + + +D TG S+G F+ F D D
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDS 354
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 355 IDKVMAAGEHTINSKKV 405
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 46.4 bits (105), Expect = 1e-05
Identities = 24/77 (31%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFK-APDS 354
G +D+K++VG L + +KE+ D F YG I+ +++K +GR FAF+ F+ D+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFEDHRDA 59
Query: 355 IDKVMAAGEHTINSKKV 405
D V A + + +++
Sbjct: 60 EDAVRARDGYEFDGRRI 76
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 45.6 bits (103), Expect = 2e-05
Identities = 16/47 (34%), Positives = 33/47 (70%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++VG + ++ +++E+ ++F+A G + ++ + D TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 122
Query: 376 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIK 486
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 123 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 152
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/97 (24%), Positives = 52/97 (53%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++FVGG T++ ELR+HF + ++ + + + G+S+G+ FI F+ D +++
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI--- 123
Query: 376 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIK 486
+K+ PK+ + R K+ +G +I+ + +
Sbjct: 124 -------RKLTPKQLEFRSRKLNLGPAIRKINSNSFQ 153
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
++VG ++T++ +L ++FS G + ++ + D TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
++VG + ++D++ N+FS GN+ V + D
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCD 38
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 378
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P + AA
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP----QAAAAA 164
Query: 379 EHTINSKKVDPKKAKARHGK-----IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
+N++ V + AK + + +++ L + ++ ++ + FG +I +
Sbjct: 165 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRI 219
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 378
L++ GL T+D LR+ S YG I S D T +G+ F+ F++P + AA
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP----QAAAAA 138
Query: 379 EHTINSKKVDPKKAKARHGK-----IFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
+N++ V + AK + + +++ L + ++ ++ + FG +I +
Sbjct: 139 VDGLNTEGVQAQMAKLQQQEQDPTNLYIANLPLDFTEQMLETELNKFGMVISTRI 193
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI 357
D R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F +S+
Sbjct: 23 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 351
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ D
Sbjct: 120 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 178
Query: 352 SIDK 363
K
Sbjct: 179 DAQK 182
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSI 357
D R L + ++ +T ++L + FSA G + + + TD TGRS+G ++ F +S+
Sbjct: 168 DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 351
APG + V L + +K +RD F ++G IE I+++ D N +RGFA I F+ D
Sbjct: 265 APGNKGPTHVLVENLHPKIDEKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNAD 323
Query: 352 SIDK 363
K
Sbjct: 324 DAQK 327
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 178 GRD-DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
G D R +FVG +S++ S+ +R FS G + SI + D TG+ +G+ FI F
Sbjct: 12 GNDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
Score = 37.5 bits (83), Expect = 0.006
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +1
Query: 439 IFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
+FVG +S ++S+D I++ FS GN++ ++M D
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHD 52
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 44.0 bits (99), Expect = 7e-05
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Frame = +1
Query: 133 EHGGGDGQDNSAEAPGRD---DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPN 303
EHG + E R+ + +LF+ L + T + +L+ F YGE+ + V D
Sbjct: 256 EHGASLESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKK 315
Query: 304 TGRSRGFAFIVFKAPDS 354
TG +GFA + F P++
Sbjct: 316 TGACKGFAIVEFVFPEA 332
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
+L V L ++++LR F YG+I ++K G+ RGFAF+ F S +A
Sbjct: 4 RLIVKNLPSTCTEQQLRKFFEKYGQISDASLKYTKE-GKFRGFAFVGFLDEGSASNALAK 62
Query: 376 GEHT-INSKKVDPKKAK 423
T NSKK+ ++ +
Sbjct: 63 SNQTFFNSKKLTVEECR 79
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/116 (18%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +1
Query: 76 NNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRK------LFVGGLSWETSDK 237
+N +F +I ++ + ++ +++A P ++++K +F+G + + ++ +
Sbjct: 10 SNSHFEMEIEAESAILQQIQNKMAKHLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIE 69
Query: 238 ELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKV 405
E+ +HF G+I + D T + + FA+I F SI+ + S+ +
Sbjct: 70 EIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPI 125
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 44.0 bits (99), Expect = 7e-05
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +1
Query: 142 GGDGQDNSAEAPG-RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSR 318
GG D A G +++VG + + + L F G+I + + DP +G SR
Sbjct: 182 GGPPPDWEGPATGPAGQGHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASR 241
Query: 319 GFAFIVF-KAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI 483
G+AF+ + D+ H I++ K + ++F+G + S DEI
Sbjct: 242 GYAFVTYCNKEDAAAAAKTYDGHEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEI 297
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 181 RDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 360
R D+ V L E ++ ELRD F G + I + D TG +GFAF+ F++ D
Sbjct: 172 RSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAA 231
Query: 361 KVMA 372
+ +A
Sbjct: 232 RAIA 235
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 145 GDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGF 324
G G D A AP + L + LS++T+ +LR F YG+I +++ D + +S+GF
Sbjct: 4 GGGGDRRA-APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Query: 325 AFIVF 339
F+ F
Sbjct: 63 GFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +1
Query: 145 GDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGF 324
G G D A AP + L + LS++T+ +LR F YG+I +++ D + +S+GF
Sbjct: 4 GGGGDRRA-APDINGLTSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGF 62
Query: 325 AFIVF 339
F+ F
Sbjct: 63 GFVRF 67
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/49 (34%), Positives = 31/49 (63%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVF 339
R L+VGG + + ++K L F +G++ +I++ D +G+ RGF F+ F
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/37 (24%), Positives = 22/37 (59%)
Frame = +1
Query: 427 RHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
R ++VGG + ++++ + F FG+++ + +P D
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMD 45
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/116 (18%), Positives = 55/116 (47%), Gaps = 6/116 (5%)
Frame = +1
Query: 76 NNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRK------LFVGGLSWETSDK 237
++++F +I ++ + ++ +++A P ++++K +F+G + + ++ +
Sbjct: 16 SSNSFEMEIEAESAILEQIQNKMAKNLESAAYVPPTEEEQKAIDAKSVFIGNVDFNSTIE 75
Query: 238 ELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKV 405
E+ +HF G I + D T + + FA+I F SI+ + S+ +
Sbjct: 76 EVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPI 131
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 175 PGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 354
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + +S
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 355 IDKVMAA-GEHTINSKKVDPKKAKARHGKI 441
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%)
Frame = +1
Query: 175 PGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDS 354
P D +++V + + +++L F AYG + S+ + T N S+GF F+ + +S
Sbjct: 45 PASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVT--NDRGSKGFGFVTLDSIES 102
Query: 355 IDKVMAA-GEHTINSKKVDPKKAKARHGKI 441
+K AA E + + ++ ++A K+
Sbjct: 103 CEKARAALHESHVQGRIIEVRRATPTRRKL 132
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 157 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 336
D S + D R+L V + ++ + +L F G + ++V+ N S+GF F+
Sbjct: 88 DRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVT 145
Query: 337 FKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 438
+ PD D+ A TI ++V+ A R H K
Sbjct: 146 MQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/63 (25%), Positives = 35/63 (55%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 378
+FV + E ++ ++ D FS YG+I++I++ D TG +G+A + ++ ++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 379 EHT 387
T
Sbjct: 117 NDT 119
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 157 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIV 336
D S + D R+L V + ++ + +L F G + ++V+ N S+GF F+
Sbjct: 88 DRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPV--VDVEIIFNERGSKGFGFVT 145
Query: 337 FKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 438
+ PD D+ A TI ++V+ A R H K
Sbjct: 146 MQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 181
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 39.1 bits (87), Expect = 0.002
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVM 369
+FVG L E +LR+ F +GE+ + D NT + +G+ F+ + + ++ +
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAI 190
Score = 34.7 bits (76), Expect = 0.043
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPD 351
A G +D R LFV L +D+ L F+ G + + + G + +AF+ F +
Sbjct: 33 ASGSEDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFE---GLNDPYAFVEFSDHN 89
Query: 352 SIDKVMAA--GEHTINSKK-----VDP--------KKAKARHGKIFVGGLSSEISDDEIK 486
+ + G + + +P K +RH +FVG L SEI +++
Sbjct: 90 QATLALQSHNGRELLEKEMHVTWAFEPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLR 149
Query: 487 NFFSNFGNIIEVEM 528
F FG + E ++
Sbjct: 150 EAFVKFGEVSEAKI 163
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +1
Query: 382 HTINSKKVDP--KKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
H + K D +A A + ++VG +++ + +DEI+ F FG I EV
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEV 284
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 364 VMA 372
+A
Sbjct: 347 AIA 349
Score = 30.3 bits (65), Expect = 0.92
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFG 507
KIF+GGL + +++D++K +FG
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFG 315
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 346
Query: 364 VMA 372
+A
Sbjct: 347 AIA 349
Score = 30.3 bits (65), Expect = 0.92
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFG 507
KIF+GGL + +++D++K +FG
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFG 315
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 321
Query: 364 VMA 372
+A
Sbjct: 322 AIA 324
Score = 30.3 bits (65), Expect = 0.92
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFG 507
KIF+GGL + +++D++K +FG
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFG 290
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
D K+F+GGL ++ ++++ ++G +++ ++ D + G S+G+AF + P D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVD-SQGNSKGYAFAEYLDPTLTDQ 324
Query: 364 VMA 372
+A
Sbjct: 325 AIA 327
Score = 30.3 bits (65), Expect = 0.92
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFG 507
KIF+GGL + +++D++K +FG
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFG 293
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 211 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 390
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 391 NSKKVD 408
S+ ++
Sbjct: 68 GSRYIE 73
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 37.1 bits (82), Expect = 0.008
Identities = 20/66 (30%), Positives = 34/66 (51%)
Frame = +1
Query: 211 GLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTI 390
GL WE +++ELRD F G IES+ + GR+ G A +VF + + + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIPR--RNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 391 NSKKVD 408
S+ ++
Sbjct: 68 GSRYIE 73
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 36.3 bits (80), Expect = 0.014
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
+LFVG L E + EL++ FS +G+I + +GFAF+ D+ +A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRL---DTRAHAESA 166
Query: 376 GEHTINSKKVDPKKAKAR---HG-KIFVGGLSSEISDDEIKNFFSNFGNI 513
E I+ + + ++ + R HG I V LS +S++ + + FS+FG++
Sbjct: 167 KE-AIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDV 215
Score = 34.3 bits (75), Expect = 0.056
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.014
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
+LFVG L E + EL++ FS +G+I + +GFAF+ D+ +A
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYLS-------GKGFAFLRL---DTRAHAESA 166
Query: 376 GEHTINSKKVDPKKAKAR---HG-KIFVGGLSSEISDDEIKNFFSNFGNI 513
E I+ + + ++ + R HG I V LS +S++ + + FS+FG++
Sbjct: 167 KE-AIDGRIIHGRQVRVRFAVHGAAIRVKELSPTVSNEMLYHAFSHFGDV 215
Score = 34.3 bits (75), Expect = 0.056
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/54 (25%), Positives = 33/54 (61%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAP 348
+ + +F+ LS++T ++ +++ S +G+I+ + ++G S+G AF+ F P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.5 bits (78), Expect = 0.024
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 531
K+FVGGL S + + +I NFFS +G ++V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFSAYGEIE 276
RK+FVGGL + ++ + FS YG ++
Sbjct: 88 RKVFVGGLPSCVKESDILNFFSRYGRLQ 115
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.032
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = +1
Query: 250 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 430 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 531
K+FVGG+S ++ I FF FG + V+ P
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWP 236
Score = 31.5 bits (68), Expect = 0.40
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 34/148 (22%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 354
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 355 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 453
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 454 LSSEISDDEIKNFFSNFGNIIEVEMPFD 537
L ++ +EI FS FG ++ V + D
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDID 353
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.032
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = +1
Query: 250 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 430 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 531
K+FVGG+S ++ I FF FG + V+ P
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWP 236
Score = 31.5 bits (68), Expect = 0.40
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 34/148 (22%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 354
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 355 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 453
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 454 LSSEISDDEIKNFFSNFGNIIEVEMPFD 537
L ++ +EI FS FG ++ V + D
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDID 353
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 35.1 bits (77), Expect = 0.032
Identities = 22/94 (23%), Positives = 38/94 (40%)
Frame = +1
Query: 250 HFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKAR 429
HF ++ + + N + R K+ D + A HT+ + +
Sbjct: 144 HFGSFDSMSAYNFHNNNQQQRREAHVSRDGKSFDQGNIYTAEDVHTVVKNHRNENNQRVV 203
Query: 430 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 531
K+FVGG+S ++ I FF FG + V+ P
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWP 236
Score = 31.5 bits (68), Expect = 0.40
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 34/148 (22%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEI-ESINVKTDPNT-GR-----SRGFAFIVFKAPDS 354
K+FVGG+S + K + F +G + VK PN+ G+ S + F+V+ S
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLVYSDEQS 265
Query: 355 IDKVMAAGEHTINSK------------KVDP--------KKAKARHGKI-------FVGG 453
+ K+M+A + ++ P KARH +I F+GG
Sbjct: 266 VIKLMSACHRNSQNDFFVSVPGFRDMIQIRPWFIYNGFYILEKARHNRIIDIHRTVFLGG 325
Query: 454 LSSEISDDEIKNFFSNFGNIIEVEMPFD 537
L ++ +EI FS FG ++ V + D
Sbjct: 326 LPRIVTAEEIAQMFSEFGVVLLVTIDID 353
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 34.7 bits (76), Expect = 0.043
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Frame = +1
Query: 121 NGNSEHGGGDGQDNSA---EAPGRDD-----DRKLFVGGLSWETSDKELRDHFSAYG 267
N EHG + ++ E P RD RK+FVGG+ W+ ++ L+D F +G
Sbjct: 263 NFQQEHGNKNRDSDATWFGELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
Score = 28.7 bits (61), Expect = 2.8
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEMP 531
KIFVGG+ +I++ +K+ F FG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.056
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 34.3 bits (75), Expect = 0.056
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 297
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 34.3 bits (75), Expect = 0.056
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
LFV L+ T+D++L FS +G+I + + D +G S +AFI F S ++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQ 228
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 34.3 bits (75), Expect = 0.056
Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 10/107 (9%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYGEIESI-----NVKTD-----PNTGRSRGFAFIV 336
DDRK+ V +S + + +L+ FS YG+I S KT P R+ G A I
Sbjct: 110 DDRKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATIT 169
Query: 337 FKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDD 477
FK + D+ A + K D + + GG +SDD
Sbjct: 170 FKKSEHADRAKNANPEEL--KFYDQVMVVSAYVSKKRGGKGLVLSDD 214
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 34.3 bits (75), Expect = 0.056
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 409 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIE 519
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEI 273
+LFVG L E + EL++ FS +G+I
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDI 142
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.075
Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 8/85 (9%)
Frame = +1
Query: 109 DNQLNGNSEHGGGDGQDNSA-EAPGRDDDRK-LFVGGLSWETSDKELRDHFSAYGEIES- 279
D +G GGG N + GR + ++ +FV G+S ++ + D FS G+I
Sbjct: 171 DGPPSGGGYGGGGAASGNREFGSDGRVELKETVFVQGISTTANEAYIADVFSTCGDIAKN 230
Query: 280 -----INVKTDPNTGRSRGFAFIVF 339
I + TD NTG +G I F
Sbjct: 231 DRGPRIKIYTDRNTGEPKGECMITF 255
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 33.5 bits (73), Expect = 0.099
Identities = 18/63 (28%), Positives = 36/63 (57%)
Frame = +1
Query: 154 QDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFI 333
Q+ A+ P + +R L++ L ++ + +E+ + F +G + I V NT +RG AF+
Sbjct: 7 QNRGAKLPP-EVNRILYIKNLPYKITTEEMYEIFGKFGAVRQIRVG---NTAETRGTAFV 62
Query: 334 VFK 342
V++
Sbjct: 63 VYE 65
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 11/74 (14%)
Frame = +1
Query: 187 DDRKLFVGGLSWET-------SDKELRDHFSAYGEIESI----NVKTDPNTGRSRGFAFI 333
++RK+++GG++ E ++ E++ F YGEIE + V PN FAFI
Sbjct: 324 NERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAFAFI 383
Query: 334 VFKAPDSIDKVMAA 375
+ + + A
Sbjct: 384 TMRNKAGVKAIFEA 397
Score = 30.3 bits (65), Expect = 0.92
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
Frame = +1
Query: 418 AKARHGKIFVGGLSSEI-------SDDEIKNFFSNFGNIIEVEMP 531
A KI++GG++ EI ++ EIK F +G I EV MP
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMP 365
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 32.3 bits (70), Expect = 0.23
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKEL-RDHFSAYGEIESI-----NVKTDPNTGRSRGFAFIVFK 342
++R+++VG + ++ ++KEL D + Y IE++ +K+ R GFAF+ FK
Sbjct: 15 ENRQVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFK 72
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
+I++G L+S +S+ +I++FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 30.3 bits (65), Expect = 0.92
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 376 GEHTINSKKVDPKKAKARHGKIFVGG 453
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
+I++G L+S +S+ +I++FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 30.3 bits (65), Expect = 0.92
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 376 GEHTINSKKVDPKKAKARHGKIFVGG 453
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/29 (37%), Positives = 22/29 (75%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
+I++G L+S +S+ +I++FF +G I +V
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDV 32
Score = 30.3 bits (65), Expect = 0.92
Identities = 22/86 (25%), Positives = 40/86 (46%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++++G L+ S+K++ F YG+I + +K GF F+ F D D A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLK--------NGFGFVEF--DDKRDAEDAV 53
Query: 376 GEHTINSKKVDPKKAKARHGKIFVGG 453
H +N K++ ++ + K GG
Sbjct: 54 --HDLNGKELGGERVILDYSKPRGGG 77
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/52 (25%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 364 VMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNFGNII 516
+M + + + K P A+ + K+F+GGL ++S++++ F FG ++
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
Score = 31.5 bits (68), Expect = 0.40
Identities = 19/82 (23%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Frame = +1
Query: 184 DDDRKLFVGGLSWETSDKELRDHFSA-YGEIESINVKTDPNTGRSRGFAFIVFKAPDSID 360
D R +F+GG+ T ++L YG++ + + DP +G A + F +
Sbjct: 362 DHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFSTSQAFV 421
Query: 361 KVMAAG----EHTINSKKVDPK 414
+ ++ H N+K+V+ K
Sbjct: 422 RAISGRFVQVNHAENNKRVEIK 443
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/27 (37%), Positives = 20/27 (74%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFSAYGEI 273
RK+F+GGL + S++++ F A+G++
Sbjct: 245 RKVFIGGLPIDVSEEQVWATFGAFGKV 271
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
K++VGGL S+ + E++ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
K++VGGL S+ + E++ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.5 bits (68), Expect = 0.40
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEV 522
K++VGGL S+ + E++ F FG I +V
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKV 32
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 31.5 bits (68), Expect = 0.40
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 430 HGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFD 537
H +F+GGL ++ +EI FS FG ++ V + D
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDID 139
>Z99277-2|CAB16487.1| 557|Caenorhabditis elegans Hypothetical
protein Y53C12A.3 protein.
Length = 557
Score = 31.1 bits (67), Expect = 0.53
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Frame = +1
Query: 103 TTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAYGEIESI 282
T + + NS GG + N P +L G + WE K+++D F +YG I+
Sbjct: 41 TENTRQRSNSNAGGSPDEQN----PQFGMQAQL--GKMMWEAGSKQVQDTFQSYGRIDLF 94
Query: 283 N--VKTDPNTGRSRGFAFIVFKAPDSI 357
DP R+R + + P I
Sbjct: 95 RPYFDVDPAEVRTRLIRSFIPRKPSQI 121
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 1.2
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 142 GGDGQDNSAEAPGRDDDRK 198
GGDGQ NSA+ DDDR+
Sbjct: 894 GGDGQTNSADVTVNDDDRE 912
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 28.7 bits (61), Expect = 2.8
Identities = 9/31 (29%), Positives = 21/31 (67%)
Frame = +1
Query: 436 KIFVGGLSSEISDDEIKNFFSNFGNIIEVEM 528
++++G L + SD ++++FF +G + +V M
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM 33
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/70 (22%), Positives = 33/70 (47%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++++G L SD+++ F YG++ + +K GF F+ F+ D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMK--------NGFGFVDFQDQRDADDAV-- 52
Query: 376 GEHTINSKKV 405
H +N K++
Sbjct: 53 --HDLNGKEL 60
>CU457737-8|CAM36329.1| 811|Caenorhabditis elegans Hypothetical
protein C52D10.12 protein.
Length = 811
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -2
Query: 437 LPCLAFAFLGSTFLLLIVCSPAAITLSIESGALKTMNANPRDLPV 303
L CL+ F G T L L+ +P + L I+SGA+K + LPV
Sbjct: 211 LLCLSALFSGLT-LGLMSLTPQELELVIKSGAIKEQKCAAKILPV 254
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 2.8
Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Frame = +1
Query: 55 KII*VMANNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 234
KI + N+ + ++ DNQ +E +NS E + R +++ G S +T
Sbjct: 66 KIANAVKNSGSGIISVSEDNQKIRRNEEN--PVPENSLEYWQKIKHRTVYMKGFSTDTQL 123
Query: 235 KELRDHFSAYGEIESINV-KTDPNTGRSRGFAFIVFKAPDSIDKVMAA 375
++ + +GE E++ + + P +G FI +K + + A
Sbjct: 124 DDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTREEAEAAQKA 171
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/85 (20%), Positives = 39/85 (45%)
Frame = +1
Query: 199 LFVGGLSWETSDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAG 378
L+VG LS+ T + ++ + F G++ + + D GF F+ + + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL--- 95
Query: 379 EHTINSKKVDPKKAKARHGKIFVGG 453
I++ ++D + +A F+ G
Sbjct: 96 -QNISNTRMDDRVIRADWDAGFIEG 119
>Z68160-1|CAA92294.2| 489|Caenorhabditis elegans Hypothetical
protein D1046.1 protein.
Length = 489
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 202 FVGGLSWETSDKELRDHFSAYGEIES--INVKTDPN--TGRSRGFAFIVFKAPDSIDKVM 369
+VG L W T+D +L + G S ++K N G+S+G+A +V + ++ + M
Sbjct: 87 YVGNLLWYTTDADLLKALQSTGLARSQFADMKFFENRTNGQSKGYALLVLNSDAAVKQTM 146
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 280 INVKTDPNTGRSRGFAFIVFKAPDSIDKVMAA-GEHTINSKKVDPKKAKAR-HGK 438
++V+ N S+GF F+ + PD D+ A TI ++V+ A R H K
Sbjct: 9 VDVEIIFNERGSKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNK 63
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 79 NDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 234
ND + + +N N N+ +GG G N+ G +++ G +WE+++
Sbjct: 430 NDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNN-GNDGNNWESNN 480
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 79 NDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 234
ND + + +N N N+ +GG G N+ G +++ G +WE+++
Sbjct: 430 NDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNN-GNDGNNWESNN 480
>AC006625-4|AAK68276.1| 446|Caenorhabditis elegans Hypothetical
protein C55B7.5 protein.
Length = 446
Score = 27.5 bits (58), Expect = 6.5
Identities = 22/85 (25%), Positives = 40/85 (47%), Gaps = 2/85 (2%)
Frame = +1
Query: 70 MANNDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVG-GLSWETSDKELR 246
M+ ND + I N+LNG+ +H + E +D+D +E S+++L+
Sbjct: 155 MSQNDEQNEKIIEKNKLNGDQDHNDVMNRLEELEKLEQDNDEMEEAPIPKPFEVSNEDLQ 214
Query: 247 DHFSAYGEIESI-NVKTDPNTGRSR 318
D G++E + V+ DP + R
Sbjct: 215 D----LGKLEEVEEVEQDPTDKKLR 235
>L07144-4|AAK21440.2| 187|Caenorhabditis elegans Hypothetical
protein R05D3.8 protein.
Length = 187
Score = 27.1 bits (57), Expect = 8.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 187 DDRKLFVGGLSWET-SDKELRDHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDK 363
+ ++LFV + + KEL+ +F AYG+I + +D + G F I F S+D
Sbjct: 29 ESKRLFVSYFPLDRLTSKELKMNFGAYGKITDVEFVSD-SEGPLH-FCIITFADSRSVDV 86
Query: 364 VM 369
++
Sbjct: 87 LL 88
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 313 SRGFAFIVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARH 432
SRGF IVF A ++++V G H +N K K K H
Sbjct: 487 SRGFVEIVFCAITAMEQVKGYGTHLMNHCKDYMIKNKIYH 526
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.394
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,806,561
Number of Sequences: 27780
Number of extensions: 243591
Number of successful extensions: 1101
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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