Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_L03
         (429 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070628-1|AAL48099.1|  154|Drosophila melanogaster RE73432p pro...    37   0.013
AL132792-2|CAB60031.1|  306|Drosophila melanogaster EG:BACR19J1....    37   0.013
AE014298-100|AAF45544.1|  306|Drosophila melanogaster CG5254-PA ...    37   0.013
AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB...    29   2.6  
AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA...    29   2.6  
U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase ...    27   8.1  

>AY070628-1|AAL48099.1|  154|Drosophila melanogaster RE73432p
           protein.
          Length = 154

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 240 RKTLSSISVVVYRSETLGKMIRGRICKIYHRGPNSKYTILAIDYGFYDYLV 392
           R TLSS+ +V YR E    + +G + KI   GP     +L  +Y  YDYL+
Sbjct: 102 RGTLSSMGIV-YREEGFRALYKGLVPKIMRLGPGGAILLLVFEYS-YDYLL 150


>AL132792-2|CAB60031.1|  306|Drosophila melanogaster EG:BACR19J1.2
           protein.
          Length = 306

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 240 RKTLSSISVVVYRSETLGKMIRGRICKIYHRGPNSKYTILAIDYGFYDYLV 392
           R TLSS+ +V YR E    + +G + KI   GP     +L  +Y  YDYL+
Sbjct: 254 RGTLSSMGIV-YREEGFRALYKGLVPKIMRLGPGGAILLLVFEYS-YDYLL 302


>AE014298-100|AAF45544.1|  306|Drosophila melanogaster CG5254-PA
           protein.
          Length = 306

 Score = 36.7 bits (81), Expect = 0.013
 Identities = 20/51 (39%), Positives = 28/51 (54%)
 Frame = +3

Query: 240 RKTLSSISVVVYRSETLGKMIRGRICKIYHRGPNSKYTILAIDYGFYDYLV 392
           R TLSS+ +V YR E    + +G + KI   GP     +L  +Y  YDYL+
Sbjct: 254 RGTLSSMGIV-YREEGFRALYKGLVPKIMRLGPGGAILLLVFEYS-YDYLL 302


>AE014296-352|AAS64934.1| 3966|Drosophila melanogaster CG15804-PB,
           isoform B protein.
          Length = 3966

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -2

Query: 359 KYCIFTVRSSVIYLTNSASYHFSQSLRTVN 270
           +YC+  V ++++ LT  + YHF  +++T+N
Sbjct: 549 QYCL-QVGTNIVELTEMSKYHFDLTIKTIN 577


>AE014296-351|AAF47564.1| 3868|Drosophila melanogaster CG15804-PA,
           isoform A protein.
          Length = 3868

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = -2

Query: 359 KYCIFTVRSSVIYLTNSASYHFSQSLRTVN 270
           +YC+  V ++++ LT  + YHF  +++T+N
Sbjct: 549 QYCL-QVGTNIVELTEMSKYHFDLTIKTIN 577


>U92536-1|AAD41441.1| 1487|Drosophila melanogaster RECQ helicase
           homolog protein.
          Length = 1487

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -1

Query: 294 FPKSQNGKRRHLLSLMSSFFNGPPQ 220
           FP  +NG R HLL+L  S    PPQ
Sbjct: 207 FPNKENGNRHHLLTLSDS--PPPPQ 229


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,855,091
Number of Sequences: 53049
Number of extensions: 367562
Number of successful extensions: 787
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1334434944
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)