Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_L02
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical pr... 128 3e-30
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 31 0.52
Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 28 6.4
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical p... 28 6.4
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 28 6.4
AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical... 28 6.4
Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical pr... 27 8.4
U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helical... 27 8.4
U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helical... 27 8.4
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41007-4|AAA82266.1| 659|Caenorhabditis elegans Hypothetical pr... 27 8.4
>Z73899-2|CAA98074.1| 536|Caenorhabditis elegans Hypothetical
protein ZK829.4 protein.
Length = 536
Score = 128 bits (309), Expect = 3e-30
Identities = 59/123 (47%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 266 ASHEIPEKLRDIPTSANPKFFHMVEYFFHRACQVIEDKLVEDLKSR-MPVEEKKKKVAGI 442
A ++ ++ + + NP F+ MV+++F++ +VI KL E+LKS + ++KK V+GI
Sbjct: 24 AHSQVLDEQKPMEEQVNPSFYKMVDFYFNKGAEVIAPKLAEELKSNSLSQKDKKNLVSGI 83
Query: 443 LKLMEPCDHILEIQFPLRRDSGDYEMILGYRAQHSTHRTPTKGGIRFSTEVTRDEVKALS 622
L ++P + +L I FP+RRD+G++E+I +RAQHS HRTPTKGGIR+S +V DEVKALS
Sbjct: 84 LGAIKPVNKVLYITFPIRRDNGEFEVIEAWRAQHSEHRTPTKGGIRYSLDVCEDEVKALS 143
Query: 623 ALM 631
ALM
Sbjct: 144 ALM 146
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical
protein T28D9.7 protein.
Length = 982
Score = 31.5 bits (68), Expect = 0.52
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +2
Query: 260 TYASHEIPEKLRDIPTSANPKFFHMVEYFFHRACQVIEDKLVEDLKSRM--PVEEKKKKV 433
T++ + + AN FF + E F+R V DLKSR V++ +++
Sbjct: 465 TFSCEDKSRPITSEEKKANQMFFLLDETAFNR--NATRYMSVGDLKSRYGDKVDDVAEEI 522
Query: 434 AGILKLMEPCDHILEIQFPLRRDSGDY 514
A IL++ME H+ +R +GD+
Sbjct: 523 AVILRIMEKLWHVFMPDSYIRTMTGDF 549
>Z78066-9|CAN86643.1| 2488|Caenorhabditis elegans Hypothetical
protein W06A7.3f protein.
Length = 2488
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 404 MPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 526
+P+E +++ + K E CDH+++ Q L R S E I+
Sbjct: 443 LPIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-6|CAB51467.1| 2484|Caenorhabditis elegans Hypothetical
protein W06A7.3c protein.
Length = 2484
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 404 MPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 526
+P+E +++ + K E CDH+++ Q L R S E I+
Sbjct: 443 LPIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z78066-4|CAB01522.2| 2607|Caenorhabditis elegans Hypothetical
protein W06A7.3a protein.
Length = 2607
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +2
Query: 404 MPVEEKKKKVAGILKLMEPCDHILEIQFPLRRDSGDYEMIL 526
+P+E +++ + K E CDH+++ Q L R S E I+
Sbjct: 443 LPIENSEQETVAV-KATESCDHVVDSQKTLERASSLEEDIM 482
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 EIPEKLRDIPTSANPKFFHM--VEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGILK 448
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1010 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1069
Query: 449 LME 457
+ +
Sbjct: 1070 IAQ 1072
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 EIPEKLRDIPTSANPKFFHM--VEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGILK 448
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1010 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1069
Query: 449 LME 457
+ +
Sbjct: 1070 IAQ 1072
>Z50874-12|CAA90774.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 362 QVIEDKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHIL 475
+VI DK+++ RM ++ K ++ I +LM+ +H++
Sbjct: 426 EVISDKMLKACAERMKDKKPKVRIQAIKRLMDLYNHVM 463
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +2
Query: 275 EIPEKLRDIPTSANPKFFHM--VEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGILK 448
EI KL + S K H V+ + +ED L + ++R ++++K+KV G LK
Sbjct: 1013 EINRKLMEDLQSEEDKGNHQNKVKAKLEQTLDDLEDSLEREKRARADLDKQKRKVEGELK 1072
Query: 449 LME 457
+ +
Sbjct: 1073 IAQ 1075
>AL024499-10|CAA19710.2| 1570|Caenorhabditis elegans Hypothetical
protein H38K22.1 protein.
Length = 1570
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 362 QVIEDKLVEDLKSRMPVEEKKKKVAGILKLMEPCDHIL 475
+VI DK+++ RM ++ K ++ I +LM+ +H++
Sbjct: 426 EVISDKMLKACAERMKDKKPKVRIQAIKRLMDLYNHVM 463
>Z54281-4|CAA91049.1| 199|Caenorhabditis elegans Hypothetical
protein F46C5.7 protein.
Length = 199
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -1
Query: 455 PSVLEYQLLSSFFLQQAFWISNLLPIY 375
P++L LS+ F+ W+S L+PI+
Sbjct: 86 PALLHLHTLSAAFMSMVCWLSVLIPIF 112
>U64858-3|AAN84865.1| 1250|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform b
protein.
Length = 1250
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 365 VIEDKLVEDLKSRMPVE-EKKKKVAGILKLMEPCDHILEIQF 487
++ DK++ K+ V+ +KK KV + +E DHIL +++
Sbjct: 897 ILHDKMILVTKNNHIVQTDKKLKVVNVATELERVDHILPLRY 938
>U64858-1|AAN84864.1| 2456|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 3, isoform a
protein.
Length = 2456
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 365 VIEDKLVEDLKSRMPVE-EKKKKVAGILKLMEPCDHILEIQF 487
++ DK++ K+ V+ +KK KV + +E DHIL +++
Sbjct: 897 ILHDKMILVTKNNHIVQTDKKLKVVNVATELERVDHILPLRY 938
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 27.5 bits (58), Expect = 8.4
Identities = 20/79 (25%), Positives = 30/79 (37%)
Frame = +2
Query: 161 AKTVVPPLKNCVQNEALNTVLRMTPAGLNICCRTYASHEIPEKLRDIPTSANPKFFHMVE 340
AKT++P + CV N N + M + + TY + IP +
Sbjct: 180 AKTIIPSVTLCVLNLLQNICIMMVALSILLIRNTY-NWCIPTVRLSFLRGIQAFVEEKLV 238
Query: 341 YFFHRACQVIEDKLVEDLK 397
YF H CQ+ + L K
Sbjct: 239 YFAHLMCQIGQRLLASPAK 257
>U41027-7|AAP46276.1| 1465|Caenorhabditis elegans Hypothetical protein
R08E3.1b protein.
Length = 1465
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/63 (20%), Positives = 24/63 (38%)
Frame = -2
Query: 415 FNRHSGFQIFYQFIFDYLTCSMEKILNHVEKFRVCTGRYVSKLFRDLMACISTATNIQPS 236
F R SG FY CS + + + T +++ + ++ C T+ +
Sbjct: 924 FTRKSGASCFYSHFTVLDVCSQSTTIGYQAQLTTRTSTLTNRIQQFVLTCFKTSYANNDT 983
Query: 235 RCH 227
CH
Sbjct: 984 SCH 986
>U41027-6|AAC48194.5| 1512|Caenorhabditis elegans Hypothetical protein
R08E3.1a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/63 (20%), Positives = 24/63 (38%)
Frame = -2
Query: 415 FNRHSGFQIFYQFIFDYLTCSMEKILNHVEKFRVCTGRYVSKLFRDLMACISTATNIQPS 236
F R SG FY CS + + + T +++ + ++ C T+ +
Sbjct: 924 FTRKSGASCFYSHFTVLDVCSQSTTIGYQAQLTTRTSTLTNRIQQFVLTCFKTSYANNDT 983
Query: 235 RCH 227
CH
Sbjct: 984 SCH 986
>U41007-4|AAA82266.1| 659|Caenorhabditis elegans Hypothetical
protein C33H5.9 protein.
Length = 659
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = +2
Query: 269 SHEIPEKLRDIPTSANPKFFHMVEYFFHRACQVIEDKLVEDLKSRMPVEEKKKKVAGIL 445
S ++ KL I N F V+ + +V+ED L+E+ E+K +VA IL
Sbjct: 117 SADLVHKLYSISQELNKDKFANVQARIGQRYKVVEDLLIEEFVRSQRDEKKMAEVAKIL 175
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,264,403
Number of Sequences: 27780
Number of extensions: 343787
Number of successful extensions: 830
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 829
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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