Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K23
(561 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0810 - 31934965-31935013,31935096-31935217,31935328-319355... 65 3e-11
06_01_0815 + 6166861-6166953,6167074-6167173,6168569-6168639,616... 61 7e-10
04_01_0261 + 3516461-3516629,3517729-3517823,3518724-3518834,351... 31 0.48
09_06_0262 - 21921647-21922796,21922897-21923423 31 0.83
01_06_1713 - 39359558-39359590,39360000-39360074,39360437-393606... 31 0.83
03_05_0967 + 29265465-29266214,29267718-29267944,29268428-292685... 30 1.5
02_05_0419 - 28814754-28816114,28816749-28817435,28817554-288177... 29 1.9
08_01_0233 + 1876940-1877509,1907940-1908195,1908290-1908589,190... 29 2.5
03_03_0156 + 14939355-14939435,14939559-14939624,14940331-149404... 29 2.5
12_02_0982 - 25031778-25032122,25032388-25032534,25032693-250337... 29 3.4
03_02_0078 + 5476288-5476626,5477474-5477670,5477750-5477885,547... 29 3.4
12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781 28 4.4
09_01_0183 - 2652173-2653924 28 5.9
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 28 5.9
03_06_0497 - 34332310-34334415 28 5.9
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 28 5.9
12_02_1261 + 27410921-27413401 27 7.7
03_02_0349 - 7722461-7723069,7723494-7724221,7724281-7724641,772... 27 7.7
01_06_1332 - 36379736-36379909,36380395-36380459,36380534-363806... 27 7.7
01_06_0924 - 33058194-33058697,33058798-33060147,33060234-330603... 27 7.7
>02_05_0810 -
31934965-31935013,31935096-31935217,31935328-31935519,
31937689-31937759,31938708-31938819,31938911-31939015
Length = 216
Score = 65.3 bits (152), Expect = 3e-11
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Frame = +2
Query: 290 NGSLNMTDNSLG-GGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPP 466
+G ++ D + GGD+ A++ +L +K R++EMEEEA L+ MQ +V K+M G PP
Sbjct: 16 DGDMDGADVDMASGGDD--AAKLQELDQMKRRLKEMEEEAAALRDMQAKVAKEM-QGGPP 72
Query: 467 GLTSPLNMSFEEQMEADNRSVYVGHVDYGAT 559
G P + E + + D RSVYVG+VDY T
Sbjct: 73 G-GDPSASTAEAKEQVDARSVYVGNVDYACT 102
>06_01_0815 +
6166861-6166953,6167074-6167173,6168569-6168639,
6169873-6170064,6170168-6170290
Length = 192
Score = 60.9 bits (141), Expect = 7e-10
Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +2
Query: 266 DNNHLDGTNGSLNMTDNSLGG-GDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDK 442
+ + + G L+ D +G GDE A++ +L +K R++EMEEEA L++MQT+V K
Sbjct: 4 EEHEVYGQEIPLDGEDVDMGAPGDE--AAKMQELDEMKRRLKEMEEEANALREMQTKVAK 61
Query: 443 QMSMGSPPGLTSPLNMSFEEQMEADNRSVYVGHVDYGAT 559
+M GL P S E + E D RSVYVG+VDY T
Sbjct: 62 EMQ-----GL-DPNASSSESKEEMDARSVYVGNVDYACT 94
>04_01_0261 +
3516461-3516629,3517729-3517823,3518724-3518834,
3519179-3519213,3519864-3519954,3520124-3520196,
3521127-3521257,3524325-3524720
Length = 366
Score = 31.5 bits (68), Expect = 0.48
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +2
Query: 332 DEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSFEEQME 511
+ +T DLA +K +ME+E L++ E+++Q+ S G S N + E ME
Sbjct: 198 ENLTKKRNEDLAKLKKEKEDMEKEIRGLRERIKELEEQVISSSSSG-KSLTNNAAENIME 256
Query: 512 ADNRSV 529
N+ +
Sbjct: 257 GINKQI 262
>09_06_0262 - 21921647-21922796,21922897-21923423
Length = 558
Score = 30.7 bits (66), Expect = 0.83
Identities = 21/87 (24%), Positives = 36/87 (41%), Gaps = 5/87 (5%)
Frame = +2
Query: 239 ENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDE-----MTGAEVPDLAAIKARVREMEEE 403
+ DDY D +D+N +D S ++ + + D+ A +L I R R + EE
Sbjct: 19 DGDDYTDEVDSN-VDDDGESWDLEEEEVDDDDDDEAKKKKAAAAVNLTKIDRRYRNLSEE 77
Query: 404 AEKLKQMQTEVDKQMSMGSPPGLTSPL 484
+ +Q + PPG + L
Sbjct: 78 QVRARQDADTANVGELFAIPPGFAAVL 104
>01_06_1713 -
39359558-39359590,39360000-39360074,39360437-39360662,
39360792-39360880,39360960-39361053,39361134-39361318,
39361415-39361582,39361682-39361822,39362327-39362545,
39362628-39362744,39363154-39363248,39363662-39363743,
39363864-39363926,39364157-39364216,39364312-39364476,
39364574-39364759,39364890-39365180,39365262-39365405,
39365492-39366172,39367045-39367362
Length = 1143
Score = 30.7 bits (66), Expect = 0.83
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 359 DLAAIKARVREMEEEAEKLKQMQTEVDKQMS 451
D+ I+A++ E++E EKLK E+DK +S
Sbjct: 252 DVKQIRAKIVELDESTEKLKSEIQEMDKNIS 282
>03_05_0967 +
29265465-29266214,29267718-29267944,29268428-29268557,
29268651-29268719,29268803-29268946,29269775-29270011,
29270897-29270998,29271131-29271396,29271766-29273410,
29274449-29275018
Length = 1379
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 236 AENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEM 340
A D+ D + +H DG +GSL + D++ GD++
Sbjct: 693 AAADEAADKLSADHFDGNDGSLALVDSAEVDGDDV 727
>02_05_0419 -
28814754-28816114,28816749-28817435,28817554-28817774,
28818536-28818750
Length = 827
Score = 29.5 bits (63), Expect = 1.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 489 MFSGLVSPGGLPILICLSTSV 427
+F GL+ PGG+P++ C+ V
Sbjct: 776 IFGGLIKPGGIPLVTCVPAKV 796
>08_01_0233 +
1876940-1877509,1907940-1908195,1908290-1908589,
1908777-1908939,1908958-1908994,1910122-1910742
Length = 648
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +2
Query: 323 GGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVD 439
GGGD T E AAI R+RE+ E + ++ +T VD
Sbjct: 210 GGGDAATATEPSLPAAITRRLRELAWEDKDKEKARTVVD 248
>03_03_0156 +
14939355-14939435,14939559-14939624,14940331-14940414,
14940796-14940875,14941313-14941358,14941456-14941566,
14942224-14942290,14942615-14942630,14942871-14942931,
14943015-14943145,14943243-14943360,14944053-14944176,
14944517-14944618,14944717-14944785,14946250-14946329
Length = 411
Score = 29.1 bits (62), Expect = 2.5
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = +2
Query: 326 GGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEV----DKQMSMGSPPGLTSPLNMS 493
GGD ++AA++ RV+E+E E ++L ++ + K S S P ++ L+ S
Sbjct: 7 GGDGEAAVMRAEVAALRLRVQELERENQRLGKIASRCTCGSSKDDSAASSPVVSESLSSS 66
Query: 494 FEE 502
+E
Sbjct: 67 KQE 69
>12_02_0982 -
25031778-25032122,25032388-25032534,25032693-25033718,
25033758-25034227,25034393-25034471
Length = 688
Score = 28.7 bits (61), Expect = 3.4
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +2
Query: 239 ENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEE 403
++DD D D+ D + + D GGG+E+ GA+ DL + RE +++
Sbjct: 192 DDDDDDDDDDDEDDDDDDDDDDDDDGDGGGGNEVVGADGHDLGVVVHPWREDDDD 246
>03_02_0078 +
5476288-5476626,5477474-5477670,5477750-5477885,
5478055-5478132,5478227-5478280,5478466-5478650,
5478781-5480374,5480506-5480700,5480753-5480904,
5481213-5481486,5481597-5481733,5482219-5482258,
5482773-5483261,5483605-5484168
Length = 1477
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 314 NSLGGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQT-EVDKQMSMGSPPGLTSPLNM 490
N G G + T VP A + E++ E + M T ++D + PP + L +
Sbjct: 191 NLTGKGKQYT-VSVPLQEAADISEDDDEDDGEMIFPMTTGDIDPAVLASLPPSMQLDLLV 249
Query: 491 SFEEQMEADNRSVY 532
E++ A+NR Y
Sbjct: 250 QMRERVMAENRQKY 263
>12_02_0976 + 24995576-24996904,24997011-24997157,24997428-24997781
Length = 609
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 257 DSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAI 373
D + + G GS + D GGGDE+ GA+ DL I
Sbjct: 116 DGVQFVGVQGGVGSDDDDDGDGGGGDEVVGADGDDLGVI 154
>09_01_0183 - 2652173-2653924
Length = 583
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 510 SICSSKDMFSGLVSPGGLPILICLSTS 430
++ S +D+ S LV GGLPIL+ L S
Sbjct: 315 NVASIEDVRSALVEEGGLPILVDLLAS 341
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 27.9 bits (59), Expect = 5.9
Identities = 20/92 (21%), Positives = 40/92 (43%)
Frame = +2
Query: 254 LDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTE 433
L D H +G N + + D G +M ++ D ++KA+ + EA + +
Sbjct: 468 LQGKDMLHANGENAWVGI-DGRSGDIVDMKERKIWDSYSVKAQTFKTAIEAACMLLRIDD 526
Query: 434 VDKQMSMGSPPGLTSPLNMSFEEQMEADNRSV 529
+ + PG ++P E++ +ADN +
Sbjct: 527 IVSGIKKKQAPGASAPKQPQIEQEGDADNEQM 558
>03_06_0497 - 34332310-34334415
Length = 701
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 197 QVPNSCFRQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSLGG-GDEMTGAEVPDLAAI 373
Q+ N ++ A +D++ D ID+NH+ + SL ++S G D TG ++ + I
Sbjct: 146 QIKNKIVAVELDTARDDEFAD-IDDNHVGIDDNSLKSVNSSPAGYHDAATGGKLASVNLI 204
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = +2
Query: 371 IKARVREMEEEAEKLKQMQTEVDKQ 445
++ R+RE++EE E+LK+ Q ++DKQ
Sbjct: 192 LEERLRELDEEKEELKKYQ-QLDKQ 215
>12_02_1261 + 27410921-27413401
Length = 826
Score = 27.5 bits (58), Expect = 7.7
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 275 HLDGTNGSLNMTDNS--LGGGDEMTGAEVPD--LAAIKARVREMEEEAEKLKQMQTEVDK 442
H DG N ++++TD S L ++++ ++ D A VR ++E L+ M E+
Sbjct: 539 HRDGQNAAVDVTDKSAPLPKSEDVSLSQPTDGNKEHASAEVRTVQESYASLEAMVPEMLM 598
Query: 443 QMSMGSPPGLTSPLNMSFEEQMEADNRSV 529
+ + + + + N +E AD S+
Sbjct: 599 KAEVANGTNVAAASNSLKDEGQRADQPSL 627
>03_02_0349 -
7722461-7723069,7723494-7724221,7724281-7724641,
7724751-7725072,7725183-7725661,7726157-7726430,
7726598-7726884,7726966-7727388,7727545-7727890,
7728011-7728328,7729817-7731081
Length = 1803
Score = 27.5 bits (58), Expect = 7.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +2
Query: 218 RQIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSLGGGDEMTGAE 352
R E A D LDS D + LD +NM ++L G + G E
Sbjct: 303 RAAEEGAHPADLLDSTDKDMLDAKYWEINMYKSALEGRKDEIGVE 347
>01_06_1332 -
36379736-36379909,36380395-36380459,36380534-36380612,
36380794-36380868,36381106-36381609,36382046-36382246,
36383033-36383566
Length = 543
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/55 (21%), Positives = 29/55 (52%)
Frame = +2
Query: 275 HLDGTNGSLNMTDNSLGGGDEMTGAEVPDLAAIKARVREMEEEAEKLKQMQTEVD 439
+L G+ ++ ++ GG GAEV + K +++++ + + L ++ EV+
Sbjct: 371 NLTGSQPGTPLSGGTMTGGSASQGAEVTNQLLGKRKIQDLVSQVDPLGKVDPEVE 425
>01_06_0924 -
33058194-33058697,33058798-33060147,33060234-33060303,
33060918-33060976
Length = 660
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = +2
Query: 332 DEMTGAEVPDLAA--IKARVREMEEEAEKLKQ 421
DE G E+P A +KARV E+E+E +KQ
Sbjct: 594 DEGKGKELPAEAITDVKARVSELEKECMSMKQ 625
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,801,650
Number of Sequences: 37544
Number of extensions: 248749
Number of successful extensions: 800
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 778
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 797
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1281410928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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