Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_K23
         (561 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          25   0.52 
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      25   0.52 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    25   0.52 
DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholi...    23   1.6  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.9  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   6.4  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 221 QIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSL 322
           +++E+ E+  Y   IDN  LD  +G   +T NSL
Sbjct: 529 KLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSL 562


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +2

Query: 221 QIVEMAENDDYLDSIDNNHLDGTNGSLNMTDNSL 322
           +++E+ E+  Y   IDN  LD  +G   +T NSL
Sbjct: 529 KLIEIPEDLKYFYEIDNWMLDLNSGLNKITRNSL 562


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 25.0 bits (52), Expect = 0.52
 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 3/104 (2%)
 Frame = +2

Query: 11  YFGLQIFYLYL*ISDKYYNVNRSTLEYINTDLFKCLI*NLFFKWVIGIITGLVTEC*CSV 190
           Y     +YL   ++   YN+  +       + FK ++ N   KW     +   +E   S+
Sbjct: 331 YMSGVFYYLSTTVNPLLYNIMSNKFR----EAFKLMLPNCCGKW-----SSQKSEPRRSI 381

Query: 191 YNQV---PNSCFRQIVEMAENDDYLDSIDNNHLDGTNGSLNMTD 313
           Y+ +   P S FRQ  +   +     S DN  L G     NMT+
Sbjct: 382 YSSLLRYPRSIFRQTDDHQNSPSIFISDDNQKLTGIVQISNMTE 425


>DQ026034-1|AAY87893.1|  569|Apis mellifera nicotinic acetylcholine
           receptor alpha4subunit protein.
          Length = 569

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 527 LICCQPPFVLQKTCSVD 477
           L+  QPP V + +CS+D
Sbjct: 140 LVVWQPPAVYKSSCSID 156


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +2

Query: 233 MAENDDYLDSIDNNHLDGTNG 295
           +A ND+ L+SI     DGT G
Sbjct: 177 LATNDNILESISYVKDDGTEG 197


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 281 DGTNGSLNMTDNSLGGG 331
           DG   SLN+  N +G G
Sbjct: 85  DGVPSSLNVISNKIGNG 101


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -3

Query: 373 DGCKIWNFCSGHFITTPKTV 314
           +G  IW FC+   + TP  +
Sbjct: 66  NGLVIWIFCAAKSLRTPSNM 85


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,336
Number of Sequences: 438
Number of extensions: 2760
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)