Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K16
(474 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC094704-1|AAH94704.1| 618|Homo sapiens SPG11 protein protein. 32 0.88
AK091176-1|BAC03600.1| 808|Homo sapiens protein ( Homo sapiens ... 32 0.88
AB058743-1|BAB47469.2| 2443|Homo sapiens KIAA1840 protein protein. 32 0.88
AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2... 31 2.0
AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2... 31 2.0
AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2... 31 2.0
AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2... 31 2.0
AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppres... 31 2.7
AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein... 31 2.7
AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein. 31 2.7
AB209707-1|BAD92944.1| 1720|Homo sapiens low density lipoprotein... 31 2.7
Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein. 30 3.6
BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2... 30 3.6
AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein. 30 3.6
AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein. 30 3.6
AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein pro... 30 3.6
AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein. 30 3.6
AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein pro... 30 3.6
BC040280-1|AAH40280.1| 413|Homo sapiens CCDC83 protein protein. 29 6.2
AK124113-1|BAC85776.1| 444|Homo sapiens protein ( Homo sapiens ... 29 6.2
>BC094704-1|AAH94704.1| 618|Homo sapiens SPG11 protein protein.
Length = 618
Score = 32.3 bits (70), Expect = 0.88
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 148 YNFSDIGAINLQRTYTELHTLCSKETCHNQ 237
++FS + A+N + Y EL++L SKETC N+
Sbjct: 16 FSFSKLAALNTSK-YLELNSLPSKETCENR 44
>AK091176-1|BAC03600.1| 808|Homo sapiens protein ( Homo sapiens
cDNA FLJ33857 fis, clone CTONG2006004. ).
Length = 808
Score = 32.3 bits (70), Expect = 0.88
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 148 YNFSDIGAINLQRTYTELHTLCSKETCHNQ 237
++FS + A+N + Y EL++L SKETC N+
Sbjct: 570 FSFSKLAALNTSK-YLELNSLPSKETCENR 598
>AB058743-1|BAB47469.2| 2443|Homo sapiens KIAA1840 protein protein.
Length = 2443
Score = 32.3 bits (70), Expect = 0.88
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 148 YNFSDIGAINLQRTYTELHTLCSKETCHNQ 237
++FS + A+N + Y EL++L SKETC N+
Sbjct: 1841 FSFSKLAALNTSK-YLELNSLPSKETCENR 1869
>AL138688-3|CAH71823.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 LHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
LH CSK TC + K +C + YC+ + LH N S K
Sbjct: 39 LHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 80
>AL138688-1|CAH71822.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 LHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
LH CSK TC + K +C + YC+ + LH N S K
Sbjct: 659 LHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 700
>AL137119-3|CAH70135.1| 755|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 755
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 LHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
LH CSK TC + K +C + YC+ + LH N S K
Sbjct: 39 LHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 80
>AL137119-1|CAH70133.1| 1375|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1375
Score = 31.1 bits (67), Expect = 2.0
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +1
Query: 199 LHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
LH CSK TC + K +C + YC+ + LH N S K
Sbjct: 659 LHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 700
>AF283408-1|AAL38109.1| 1537|Homo sapiens candidate tumor suppressor
protein protein.
Length = 1537
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 211 CSKETC--HN-QSKIFNCTSQHIYCENDNDLHNKYNDSNSK 324
C K+TC H Q K NC H C++ ND + ++ N K
Sbjct: 795 CDKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCK 835
>AF176832-1|AAF70379.1| 4599|Homo sapiens low density lipoprotein
receptor related protein-deleted in tumor protein.
Length = 4599
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 211 CSKETC--HN-QSKIFNCTSQHIYCENDNDLHNKYNDSNSK 324
C K+TC H Q K NC H C++ ND + ++ N K
Sbjct: 3471 CDKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCK 3511
>AC068195-1|AAX93243.1| 1126|Homo sapiens unknown protein.
Length = 1126
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 211 CSKETC--HN-QSKIFNCTSQHIYCENDNDLHNKYNDSNSK 324
C K+TC H Q K NC H C++ ND + ++ N K
Sbjct: 329 CDKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCK 369
>AB209707-1|BAD92944.1| 1720|Homo sapiens low density
lipoprotein-related protein 1B variant protein.
Length = 1720
Score = 30.7 bits (66), Expect = 2.7
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +1
Query: 211 CSKETC--HN-QSKIFNCTSQHIYCENDNDLHNKYNDSNSK 324
C K+TC H Q K NC H C++ ND + ++ N K
Sbjct: 592 CDKKTCGPHEFQCKNNNCIPDHWRCDSQNDCSDNSDEENCK 632
>Y13472-1|CAA73875.1| 1379|Homo sapiens FIM protein protein.
Length = 1379
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 660 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 702
>BC036372-1|AAH36372.1| 1377|Homo sapiens zinc finger, MYM-type 2
protein.
Length = 1377
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 658 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 700
>AJ224901-1|CAA12204.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 658 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 700
>AJ007676-1|CAA07604.1| 1377|Homo sapiens ZNF198 protein protein.
Length = 1377
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 658 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 700
>AF060181-1|AAC23591.1| 1113|Homo sapiens zinc finger protein
protein.
Length = 1113
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 394 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 436
>AF035374-1|AAB88464.1| 699|Homo sapiens Cys-rich protein protein.
Length = 699
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 386 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 428
>AF012126-1|AAC01561.1| 757|Homo sapiens zinc finger protein
protein.
Length = 757
Score = 30.3 bits (65), Expect = 3.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +1
Query: 196 ELHTLCSKETCHNQSKIFNCTSQHI-YCENDNDLHNKYNDSNSK 324
++H CSK TC + K +C + YC+ + LH N S K
Sbjct: 38 KVHQFCSK-TCSDDYKKLHCIVTYCEYCQEEKTLHETVNFSGVK 80
>BC040280-1|AAH40280.1| 413|Homo sapiens CCDC83 protein protein.
Length = 413
Score = 29.5 bits (63), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +1
Query: 262 QHIYCENDNDLHNKYNDSNSKYVELHSERNDFDDYINV 375
Q++ + + + ++ D++ KY+ L+ + DF DY+N+
Sbjct: 329 QYVKIDKEENSGTEFGDTDMKYL-LYEDEKDFKDYVNL 365
>AK124113-1|BAC85776.1| 444|Homo sapiens protein ( Homo sapiens
cDNA FLJ42119 fis, clone TESTI2005739, weakly similar
to Drosophila melanogaster Rho-kinase (Rhk) mRNA. ).
Length = 444
Score = 29.5 bits (63), Expect = 6.2
Identities = 10/38 (26%), Positives = 24/38 (63%)
Frame = +1
Query: 262 QHIYCENDNDLHNKYNDSNSKYVELHSERNDFDDYINV 375
Q++ + + + ++ D++ KY+ L+ + DF DY+N+
Sbjct: 360 QYVKIDKEENSGTEFGDTDMKYL-LYEDEKDFKDYVNL 396
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,971,364
Number of Sequences: 237096
Number of extensions: 914761
Number of successful extensions: 2610
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2610
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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