Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K16
(474 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 28 3.0
Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical pr... 28 3.9
L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription f... 28 3.9
AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical ... 28 3.9
AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical ... 28 3.9
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr... 27 5.2
Z98877-8|CAB63404.3| 475|Caenorhabditis elegans Hypothetical pr... 27 6.9
U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF039050-11|AAC47941.1| 333|Caenorhabditis elegans Seven tm rec... 27 6.9
Z92777-4|CAB07170.1| 304|Caenorhabditis elegans Hypothetical pr... 27 9.1
L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase prot... 27 9.1
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 283 DNDLHNKYNDSNSKYVELHSERNDFDDYINVTGTSTDDFKNDMAIGHIN 429
D + +N +N N++ + + RND DDY N G + D++ + G N
Sbjct: 164 DQNNNNNFNSKNNR-MNKYGNRNDGDDY-NGNGNNQDNWNSGSNSGGYN 210
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 29.1 bits (62), Expect = 1.7
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +1
Query: 283 DNDLHNKYNDSNSKYVELHSERNDFDDYINVTGTSTDDFKNDMAIGHIN 429
D + +N +N N++ + + RND DDY N G + D++ + G N
Sbjct: 164 DQNNNNNFNSKNNR-MNKYGNRNDGDDY-NGNGNNQDNWNSGSNSGGYN 210
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 28.3 bits (60), Expect = 3.0
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +1
Query: 277 ENDNDLHNKYNDSNSKYVELHSER-NDFDD 363
EN++D+ +SN+ Y E SER N+FDD
Sbjct: 125 ENNSDVEEIIENSNACYEETISERGNEFDD 154
>Z77663-4|CAB01213.1| 605|Caenorhabditis elegans Hypothetical
protein F53F4.4 protein.
Length = 605
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/56 (25%), Positives = 25/56 (44%)
Frame = +1
Query: 139 ILFYNFSDIGAINLQRTYTELHTLCSKETCHNQSKIFNCTSQHIYCENDNDLHNKY 306
+L+Y+ S + I L +Y+ + C CH + + N ++H D KY
Sbjct: 5 VLYYSKSSL--ITLCESYSNVEEKCGLGRCHVDNPVANFVTRHFSFVCQKDAATKY 58
>Z66516-9|CAN99713.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 213 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 265
>Z66516-8|CAB60308.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 217 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 269
>Z50015-2|CAN99700.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 213 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 265
>Z50015-1|CAB60292.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 217 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 269
>U41106-1|AAA82409.1| 347|Caenorhabditis elegans Hypothetical
protein W06A11.4 protein.
Length = 347
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +1
Query: 265 HIYCENDNDLHNKYNDSNSKYVELHSERNDFDDYINVTGTS 387
++Y ++ + N+Y + S V++ S D +D I + GTS
Sbjct: 64 NVYTDSGSPFSNRYASNRSSQVKIRSVPPDSEDDIALEGTS 104
>L39212-1|AAC37255.1| 459|Caenorhabditis elegans transcription
factor protein.
Length = 459
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 217 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 269
>AL021172-3|CAN99704.1| 455|Caenorhabditis elegans Hypothetical
protein W03C9.4b protein.
Length = 455
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 213 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 265
>AL021172-2|CAB60307.2| 459|Caenorhabditis elegans Hypothetical
protein W03C9.4a protein.
Length = 459
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +1
Query: 184 RTYTELHTLCSKETCHNQSKIFNCTSQH-IYCENDNDLHNKYNDSNSKYVELH 339
+ +++L L S CH K F C S + + + + L + SK++++H
Sbjct: 217 KAFSQLSNLQSHSRCHQTDKPFKCNSCYKCFTDEQSLLDHIPKHKESKHLKIH 269
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 27.5 bits (58), Expect = 5.2
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 198 LCICPLQIYCSYITEIIKQNFTVPHFDN 115
+C+C L Y + ++ + FT+P F N
Sbjct: 232 ICLCTLPEYQKVVQDVFPKKFTLPLFKN 259
>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
protein C05C9.3 protein.
Length = 1225
Score = 27.5 bits (58), Expect = 5.2
Identities = 24/104 (23%), Positives = 42/104 (40%)
Frame = +1
Query: 160 DIGAINLQRTYTELHTLCSKETCHNQSKIFNCTSQHIYCENDNDLHNKYNDSNSKYVELH 339
DIG I +T T+ + +E C F+C S + +K + ++EL
Sbjct: 337 DIGNIQEDKTNTKRQSAEDEEECDLNVWAFSCNS---------TIEHKEAEELISHLELE 387
Query: 340 SERNDFDDYINVTGTSTDDFKNDMAIGHINDVENMKADNYDSYN 471
S +N N +D+ DM I I + + + Y ++N
Sbjct: 388 SSQNSIH---NDNRKKNEDY--DMEISEIETITQRQLEGYGTFN 426
>Z98877-8|CAB63404.3| 475|Caenorhabditis elegans Hypothetical
protein Y69H2.7 protein.
Length = 475
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 232 NQSKIFNCTSQHIYCENDNDLHNKYNDSNSKYVELH 339
N K FN +H YCE++N Y + +++E+H
Sbjct: 239 NTFKSFNYMFKHKYCESEN-FQLFYMNHEGRFMEVH 273
>U53343-5|AAA96222.1| 556|Caenorhabditis elegans Hypothetical
protein F22F4.1 protein.
Length = 556
Score = 27.1 bits (57), Expect = 6.9
Identities = 8/33 (24%), Positives = 20/33 (60%)
Frame = +1
Query: 247 FNCTSQHIYCENDNDLHNKYNDSNSKYVELHSE 345
+ C S H++ N +D + ++ D S+Y++ ++
Sbjct: 506 YACKSYHVFVRNTDDFNRRHFDDVSEYMKSQAD 538
>AF039050-11|AAC47941.1| 333|Caenorhabditis elegans Seven tm
receptor protein 83 protein.
Length = 333
Score = 27.1 bits (57), Expect = 6.9
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = -1
Query: 180 QIYCSYITEIIKQNFTVPHFDNMELKKKITLNYQQICRVVLILF 49
+I+ + I + FT+ + N++ K +I LNY I ++ ++F
Sbjct: 167 EIFERFDKNISQIAFTLVSYANLDDKGQIELNYLNIAMIIYLIF 210
>Z92777-4|CAB07170.1| 304|Caenorhabditis elegans Hypothetical
protein C17H1.6 protein.
Length = 304
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +1
Query: 217 KETCHNQSKIFNCTSQHIYCENDNDLHNKYNDSNSKYVELHSERNDFD 360
+E CHN+ K F EN+ D+ N+ +N ++L +++N D
Sbjct: 71 QEKCHNERKQFGLKIWKTVEENNADVLNEMQRTNE--IKLGNQQNKVD 116
>L23649-3|AAA27909.2| 601|Caenorhabditis elegans Tyrosinase protein
1 protein.
Length = 601
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 178 LQRTYTE-LHTLCSKETCHNQSKIFNCTSQHIYCENDNDLH 297
L YT+ L+ + TC+ + NC SQ+++C+ + H
Sbjct: 369 LSNAYTDNLYHYAPRPTCNRNNA--NCGSQYLFCDTRGNPH 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,344,708
Number of Sequences: 27780
Number of extensions: 180126
Number of successful extensions: 609
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 609
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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