Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_K15
         (410 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT021411-1|AAX33559.1|  901|Drosophila melanogaster LD05643p pro...    39   0.003
AY119604-1|AAM50258.1|  901|Drosophila melanogaster LD28359p pro...    39   0.003
AE014298-1693|AAF48097.3|  901|Drosophila melanogaster CG1578-PA...    39   0.003
U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule as...    27   7.3  
AY094825-1|AAM11178.1|  877|Drosophila melanogaster LD39479p pro...    27   7.3  
AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA...    27   7.3  

>BT021411-1|AAX33559.1|  901|Drosophila melanogaster LD05643p protein.
          Length = 901

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 13   PAPAVNMRIFYQVWSAPPMSLVRE--XXXXXXXXXXXXXXXXXXPVLALHNAFTFLSISG 186
            P PA+++++FYQV +AP   L+ +                    P  +LHN  TFLSI G
Sbjct: 838  PVPAIHLKLFYQVNAAPATDLLLQALHDFRLKCQDTAAIVYTVLPACSLHNFSTFLSICG 897

Query: 187  LRFD 198
            +R +
Sbjct: 898  VRHE 901


>AY119604-1|AAM50258.1|  901|Drosophila melanogaster LD28359p protein.
          Length = 901

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 13   PAPAVNMRIFYQVWSAPPMSLVRE--XXXXXXXXXXXXXXXXXXPVLALHNAFTFLSISG 186
            P PA+++++FYQV +AP   L+ +                    P  +LHN  TFLSI G
Sbjct: 838  PVPAIHLKLFYQVNAAPATDLLLQALHDFRLKCQDTAAIVYTVLPACSLHNFSTFLSICG 897

Query: 187  LRFD 198
            +R +
Sbjct: 898  VRHE 901


>AE014298-1693|AAF48097.3|  901|Drosophila melanogaster CG1578-PA
            protein.
          Length = 901

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +1

Query: 13   PAPAVNMRIFYQVWSAPPMSLVRE--XXXXXXXXXXXXXXXXXXPVLALHNAFTFLSISG 186
            P PA+++++FYQV +AP   L+ +                    P  +LHN  TFLSI G
Sbjct: 838  PVPAIHLKLFYQVNAAPATDLLLQALHDFRLKCQDTAAIVYTVLPACSLHNFSTFLSICG 897

Query: 187  LRFD 198
            +R +
Sbjct: 898  VRHE 901


>U95171-1|AAB51540.1| 1861|Drosophila melanogaster microtubule
            associated protein protein.
          Length = 1861

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = -3

Query: 396  FYNVRIYIICFTKYIHVVIKVEHHRQNVANVKN 298
            +Y++R  +IC  + +  ++K+   R+N   ++N
Sbjct: 1128 YYSLRKNVICLQQRLRAIMKMREQRENYLRLRN 1160


>AY094825-1|AAM11178.1|  877|Drosophila melanogaster LD39479p
           protein.
          Length = 877

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = -3

Query: 396 FYNVRIYIICFTKYIHVVIKVEHHRQNVANVKN 298
           +Y++R  +IC  + +  ++K+   R+N   ++N
Sbjct: 495 YYSLRKNVICLQQRLRAIMKMREQRENYLRLRN 527


>AE014297-3620|AAF56330.3| 1954|Drosophila melanogaster CG6875-PA
            protein.
          Length = 1954

 Score = 27.5 bits (58), Expect = 7.3
 Identities = 8/33 (24%), Positives = 20/33 (60%)
 Frame = -3

Query: 396  FYNVRIYIICFTKYIHVVIKVEHHRQNVANVKN 298
            +Y++R  +IC  + +  ++K+   R+N   ++N
Sbjct: 1221 YYSLRKNVICLQQRLRAIMKMREQRENYLRLRN 1253


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,834,543
Number of Sequences: 53049
Number of extensions: 186268
Number of successful extensions: 367
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1209331668
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)