Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K10
(498 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 38 8e-05
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 28 0.062
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 25 0.58
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 21 5.4
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 21 5.4
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 21 5.4
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 21 5.4
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 7.1
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 21 9.4
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 9.4
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 9.4
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 9.4
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 9.4
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 37.5 bits (83), Expect = 8e-05
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 398 KSFFCPECEKGFYRKDHMQKHMQVHAKSK 484
K F CPEC K F R H++ HM++H K
Sbjct: 8 KPFECPECHKRFTRDHHLKTHMRLHTGEK 36
Score = 26.6 bits (56), Expect = 0.14
Identities = 7/25 (28%), Positives = 17/25 (68%)
Frame = +2
Query: 398 KSFFCPECEKGFYRKDHMQKHMQVH 472
K + C C++ F + ++++H++VH
Sbjct: 36 KPYHCSHCDRQFVQVANLRRHLRVH 60
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 27.9 bits (59), Expect = 0.062
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 398 KSFFCPECEKGFYRKDHMQKHMQVHAKSKLKP 493
K++ C C+K F +K+ Q H++ H K P
Sbjct: 60 KTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDP 91
Score = 27.9 bits (59), Expect = 0.062
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +2
Query: 398 KSFFCPECEKGFYRKDHMQKHMQVHAKSK 484
K + C C K F K+++ H ++H K +
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHRRIHTKER 146
Score = 25.8 bits (54), Expect = 0.25
Identities = 7/25 (28%), Positives = 14/25 (56%)
Frame = +2
Query: 398 KSFFCPECEKGFYRKDHMQKHMQVH 472
+ + C CE+ F + +HM++H
Sbjct: 146 RPYKCDVCERAFEHSGKLHRHMRIH 170
Score = 22.2 bits (45), Expect = 3.1
Identities = 8/25 (32%), Positives = 11/25 (44%)
Frame = +2
Query: 410 CPECEKGFYRKDHMQKHMQVHAKSK 484
C C K F + + HM+ H K
Sbjct: 178 CTVCSKTFIQSGQLVIHMRTHTGEK 202
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 24.6 bits (51), Expect = 0.58
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 398 KSFFCPECEKGFYRKDHMQKHMQVH 472
KSF C CEK + ++ H++ H
Sbjct: 15 KSFSCKYCEKVYVSLGALKMHIRTH 39
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 272 SLAAVYSTSSVLPMSTSTYSMGNL 201
+LA + TS LPM + S GNL
Sbjct: 298 TLAKMEKTSKPLPMVDNPESTGNL 321
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 21.4 bits (43), Expect = 5.4
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 356 PTYKNTFTRYTPDIKSFFCPECEKGFYRK 442
P Y N TPD + +F EK + +
Sbjct: 84 PEYNNHLYGSTPDSRDYFSRPFEKRLHSR 112
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -3
Query: 238 YPCPPLRILWVICFL 194
+PC R W +C L
Sbjct: 82 HPCSSFRFYWDLCML 96
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -3
Query: 238 YPCPPLRILWVICFL 194
+PC R W +C L
Sbjct: 82 HPCSSFRFYWDLCML 96
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.4 bits (43), Expect = 5.4
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -3
Query: 238 YPCPPLRILWVICFL 194
+PC R W +C L
Sbjct: 82 HPCSSFRFYWDLCML 96
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 7.1
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = -3
Query: 271 PSPPYTLRRLYYPCPPLRILWVICFLSSLP 182
P YT+ L P + W+I +S++P
Sbjct: 146 PLRVYTISGLKRPIRFILAAWLIALISAIP 175
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 20.6 bits (41), Expect = 9.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 47 FETDEEFENHARAA*TMRVT 106
FE E FEN RA RVT
Sbjct: 26 FEPLEHFENEERADRHRRVT 45
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 20.6 bits (41), Expect = 9.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 47 FETDEEFENHARAA*TMRVT 106
FE E FEN RA RVT
Sbjct: 26 FEPLEHFENEERADRHRRVT 45
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 370 ILVRGFTLSGL*NGLR 323
+L+RG TL G GL+
Sbjct: 249 LLIRGLTLPGAMEGLK 264
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 241 YYPCPPLRILWVI 203
YYPC +I W I
Sbjct: 485 YYPCCWWKICWTI 497
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 20.6 bits (41), Expect = 9.4
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -3
Query: 370 ILVRGFTLSGL*NGLR 323
+L+RG TL G GL+
Sbjct: 302 LLIRGLTLPGAMEGLK 317
Score = 20.6 bits (41), Expect = 9.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -3
Query: 241 YYPCPPLRILWVI 203
YYPC +I W I
Sbjct: 538 YYPCCWWKICWTI 550
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 20.6 bits (41), Expect = 9.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 47 FETDEEFENHARAA*TMRVT 106
FE E FEN RA RVT
Sbjct: 1 FEPLEHFENEERADRHRRVT 20
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,832
Number of Sequences: 438
Number of extensions: 2644
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13618701
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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