Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K09
(456 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo... 29 0.45
SPAC140.04 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.45
SPCC576.15c |ksg1||serine/threonine protein kinase Ksg1|Schizosa... 28 0.59
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 1.4
SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr 2... 27 1.4
SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 27 1.8
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 26 2.4
SPAC4A8.07c |||sphingoid long chain base |Schizosaccharomyces po... 26 2.4
SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2 |Schiz... 25 7.3
SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr... 24 9.6
>SPBC8D2.05c |sfi1||spindle pole body protein
Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 840
Score = 28.7 bits (61), Expect = 0.45
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +3
Query: 3 YLIIGNSWESQLGRLWDLISLHQKVYSILVLKKNAVAWKYKHVKANGTNLWTE 161
Y I + W+ ++ L DL++ +Y + +L++ V W+ K + W +
Sbjct: 368 YSIALHKWKLRIEELSDLMNKADDLYEVNLLQRMLVLWRRKATTYEKIDFWMD 420
>SPAC140.04 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 295
Score = 28.7 bits (61), Expect = 0.45
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +2
Query: 101 KRSRLEIQARESKWHQFVDGELILKQ 178
+RSRLE++ + K+ Q+ GEL +K+
Sbjct: 100 QRSRLELERKAKKYDQYAAGELEIKE 125
>SPCC576.15c |ksg1||serine/threonine protein kinase
Ksg1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 592
Score = 28.3 bits (60), Expect = 0.59
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Frame = +2
Query: 278 LKGEIPWSA---ELRVEAKNFRIFLVHTPNRTYYLEDPESYALEWQRVIDE 421
+K EIP + R+ N ++V TP +++ EDP A W ++D+
Sbjct: 517 VKEEIPIKSVGMRCRMVKNNEHGWVVETPTKSWSFEDPNGPASAWVELLDK 567
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 27.1 bits (57), Expect = 1.4
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -1
Query: 189 STRPCFRINSPSTNWCHLLSRACISKRLRF 100
S+ PC + N N C++L +A ISKR F
Sbjct: 106 SSLPCSKSNDSMVNICYML-KATISKRYAF 134
>SPBC2A9.03 |||conserved protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 426
Score = 27.1 bits (57), Expect = 1.4
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 290 IPWSAELRVEAKNFRIFLVHTPNRTYYLED--PESYALEWQRVIDE 421
IPW + + KNFR++ +HT + + D PE +L+ +V E
Sbjct: 70 IPWGNKAIGKRKNFRLYRLHTYSLSCNHSDWSPEELSLDTVQVAAE 115
>SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 26.6 bits (56), Expect = 1.8
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 44 SLGFDQSTSKGILNISPEEKRSRLEIQARESKWHQFVDGELILKQGLV 187
+LG D+ S NI E+R R + KW + G+L+ QG+V
Sbjct: 35 TLGIDEEVS----NIFATEERIRKIPNYLDCKWSELKTGQLLRLQGMV 78
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 2.4
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +2
Query: 323 KNFRIFLVHTPNRTYYLEDPESYALEWQ 406
K FR FL+ +P T +L + YAL ++
Sbjct: 443 KRFRAFLITSPYATEFLTSIQFYALRYR 470
>SPAC4A8.07c |||sphingoid long chain base |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 458
Score = 26.2 bits (55), Expect = 2.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 317 EAKNFRIFLVHTPNRTYYLEDPESYALE 400
+ ++FR V+T R Y+ D ESY LE
Sbjct: 406 KVRSFRFTPVNTGKRHYFALDGESYPLE 433
>SPAC23E2.02 |lsd2|swm2, saf140|histone demethylase SWIRM2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1273
Score = 24.6 bits (51), Expect = 7.3
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = -1
Query: 429 MRTSSITRCHSNAYDSGSSK*YVRFGVCTKNILKFFASTRSSADHGISPLSIIFTGST*N 250
MRT + +++ S Y F + F ST S +PLS GST
Sbjct: 177 MRTIGLPPTVGSSFPQQKSSTYENFFDANSPSSQQFPSTYPSRSQ--NPLSSSGDGSTAI 234
Query: 249 NRGPVVNRSIRRRGNRPFRL 190
+ GP+ +++ N P+ L
Sbjct: 235 HAGPIQHQNSNAFSNYPYPL 254
>SPAC1399.03 |fur4||uracil permease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 24.2 bits (50), Expect = 9.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -1
Query: 402 HSNAYDSGSSK*YVRFGVCTKNILKFFASTRSSADHGISPL 280
HSNA+ + ++ FG+C + A+ SA + +S L
Sbjct: 334 HSNAHGVRAGVFFIAFGLCIAQLGVNIAANSVSAGNDLSAL 374
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,984,881
Number of Sequences: 5004
Number of extensions: 40765
Number of successful extensions: 120
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 170285640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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