Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K07
(595 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical... 48 4e-06
Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical pr... 40 0.001
AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein. 40 0.001
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 34 0.066
U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical pr... 33 0.12
DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related ... 32 0.35
DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related ... 32 0.35
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 32 0.35
AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeti... 32 0.35
AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeti... 32 0.35
Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical p... 31 0.47
U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical pr... 31 0.62
U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical pr... 31 0.62
AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical... 31 0.82
U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical pr... 30 1.1
U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 30 1.4
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 30 1.4
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 30 1.4
AF025460-2|AAF02169.3| 545|Caenorhabditis elegans Prion-like-(q... 29 1.9
AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical ... 29 1.9
U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical pr... 29 2.5
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 29 2.5
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 29 3.3
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 29 3.3
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 29 3.3
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 29 3.3
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 28 4.4
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 28 5.8
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical pr... 27 7.6
AL132876-24|CAE17987.1| 405|Caenorhabditis elegans Hypothetical... 27 7.6
AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical... 27 7.6
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 27 7.6
>AF067219-16|AAC17022.1| 531|Caenorhabditis elegans Hypothetical
protein R12E2.1 protein.
Length = 531
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKAN--PCQHPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFL 179
RVVLSACSPYF + + C + + ++ +E+L+ F Y G + I +++ L
Sbjct: 71 RVVLSACSPYFLSMFTSQMAECYMREINMEEIEPPTLEALIEFCYTGAIAIDDSNVQDIL 130
Query: 180 KAAQLLQV 203
AA LLQ+
Sbjct: 131 PAACLLQI 138
>Z69902-7|CAA93769.1| 618|Caenorhabditis elegans Hypothetical
protein C47D12.7 protein.
Length = 618
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKAN--PCQHPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFL 179
RV+LSA S YFR + I+ +++V + + L+ +MY G + I ++ ++ L
Sbjct: 86 RVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNVQTIL 145
Query: 180 KAAQLLQV 203
A LLQ+
Sbjct: 146 ATASLLQL 153
>AB023424-1|BAA82800.1| 618|Caenorhabditis elegans kel-1 protein.
Length = 618
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKAN--PCQHPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFL 179
RV+LSA S YFR + I+ +++V + + L+ +MY G + I ++ ++ L
Sbjct: 86 RVILSASSSYFRAMFTGGLRESTQRIIPIKEVDVEVLSQLIDYMYTGRMRIDEQNVQTIL 145
Query: 180 KAAQLLQV 203
A LLQ+
Sbjct: 146 ATASLLQL 153
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.066
Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKANPCQHPI--VILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFL 179
+V+L+A PYFR + + + + + + D++ + +++LL F Y GE+ I ++ +
Sbjct: 66 KVILAATIPYFRGMFTLDLMEANMKEINIEDMNYETVDALLSFAYTGELRITTSNVQSIM 125
Query: 180 KAAQLLQV 203
A Q+
Sbjct: 126 LGANFFQM 133
>U80842-9|AAB37945.2| 258|Caenorhabditis elegans Hypothetical
protein ZC239.6 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/63 (28%), Positives = 30/63 (47%)
Frame = +3
Query: 3 TRVVLSACSPYFRRLLKANPCQHPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFLK 182
++ L+ YF+ L + I D K E++L FM G+V + QE L + L+
Sbjct: 14 SKATLTKFDGYFKNLPEIQQVNPTSPIFVDRSPKHFETILNFMRDGDVDLPQEYLNQLLR 73
Query: 183 AAQ 191
A+
Sbjct: 74 EAR 76
>DQ178246-1|ABA18185.1| 482|Caenorhabditis elegans TPX2-related
alternative variant b protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 219 VPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQ----REGRRLRRPE-DGSANTPPP 383
VPAPAP Q A+S +GG+ NR+P + +++P S PP
Sbjct: 348 VPAPAPADAQQN---KAASRPAVPAGGAARNRQPLRVNPGTPSTTIKKPPVASSVQRQPP 404
Query: 384 KRARSSD 404
RARS D
Sbjct: 405 TRARSVD 411
>DQ178245-1|ABA18184.1| 507|Caenorhabditis elegans TPX2-related
alternative variant a protein.
Length = 507
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 219 VPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQ----REGRRLRRPE-DGSANTPPP 383
VPAPAP Q A+S +GG+ NR+P + +++P S PP
Sbjct: 348 VPAPAPADAQQN---KAASRPAVPAGGAARNRQPLRVNPGTPSTTIKKPPVASSVQRQPP 404
Query: 384 KRARSSD 404
RARS D
Sbjct: 405 TRARSVD 411
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 31.9 bits (69), Expect = 0.35
Identities = 14/65 (21%), Positives = 29/65 (44%)
Frame = +3
Query: 249 QKSSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDLYQAQMKS 428
+K + + +T+ GG R+P R+ R + PP+ A + + +M +
Sbjct: 845 RKRRNTDTEYTDDNEGGGFKKRKPDDDASRKPRNLSESERRRQPPRDAEDNGNHYKKMNA 904
Query: 429 RTEQL 443
T+Q+
Sbjct: 905 NTDQI 909
>AC025716-4|AAL32238.1| 482|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform b
protein.
Length = 482
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 219 VPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQ----REGRRLRRPE-DGSANTPPP 383
VPAPAP Q A+S +GG+ NR+P + +++P S PP
Sbjct: 348 VPAPAPADAQQN---KAASRPAVPAGGAARNRQPLRVNPGTPSTTIKKPPVASSVQRQPP 404
Query: 384 KRARSSD 404
RARS D
Sbjct: 405 TRARSVD 411
>AC025716-2|AAK39617.1| 507|Caenorhabditis elegans Tpx2 (targeting
protein for xenopusklp2)-like protein 1, isoform a
protein.
Length = 507
Score = 31.9 bits (69), Expect = 0.35
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Frame = +3
Query: 219 VPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQ----REGRRLRRPE-DGSANTPPP 383
VPAPAP Q A+S +GG+ NR+P + +++P S PP
Sbjct: 348 VPAPAPADAQQN---KAASRPAVPAGGAARNRQPLRVNPGTPSTTIKKPPVASSVQRQPP 404
Query: 384 KRARSSD 404
RARS D
Sbjct: 405 TRARSVD 411
>Z82059-11|CAC42351.2| 591|Caenorhabditis elegans Hypothetical
protein T27E9.4b protein.
Length = 591
Score = 31.5 bits (68), Expect = 0.47
Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 5/71 (7%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKANPCQHPIVILRDVHDKDM-----ESLLRFMYQGEVHIGQEQLK 170
+V+L+A PYFR + + + + + ++ D DM ++LL F Y GE+ I ++
Sbjct: 66 KVILAATIPYFRGMFTLDLMEANMKEI-NIEDSDMNYETVDALLSFAYTGELRITTSNVQ 124
Query: 171 EFLKAAQLLQV 203
+ A Q+
Sbjct: 125 SIMLGANFFQM 135
>U13072-5|AAK31400.1| 390|Caenorhabditis elegans Hypothetical
protein C07D10.2a protein.
Length = 390
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKANPC--QHPIVILRDVHDKDMESLLRFMYQGE-VHIGQEQLKEF 176
+ +L+A SP F +++ + Q+ ILRD+ + ++++L ++Y G ++G L +
Sbjct: 218 KAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNAL-DI 276
Query: 177 LKAAQLLQVRGLTEV 221
L AA+ + GL +
Sbjct: 277 LAAAERFALPGLKNI 291
>U13072-4|AAL00851.1| 397|Caenorhabditis elegans Hypothetical
protein C07D10.2b protein.
Length = 397
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/75 (26%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKANPC--QHPIVILRDVHDKDMESLLRFMYQGE-VHIGQEQLKEF 176
+ +L+A SP F +++ + Q+ ILRD+ + ++++L ++Y G ++G L +
Sbjct: 225 KAILAARSPVFAAMMEPHTAEAQNSRAILRDIDYEVVQAILYYIYTGTCTNMGGNAL-DI 283
Query: 177 LKAAQLLQVRGLTEV 221
L AA+ + GL +
Sbjct: 284 LAAAERFALPGLKNI 298
>AL033514-14|CAA22101.2| 1420|Caenorhabditis elegans Hypothetical
protein Y75B8A.13 protein.
Length = 1420
Score = 30.7 bits (66), Expect = 0.82
Identities = 26/116 (22%), Positives = 47/116 (40%)
Frame = +3
Query: 246 DQKSSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDLYQAQMK 425
+ SS S +E S S P+Q++ + + S PPP S D Q
Sbjct: 622 ESSSSSDESDESEGNSSPSEAPGSPRQQDPEPMEAFGEASEAPPPPPDQGSKD----QEA 677
Query: 426 SRTEQLLAAQGASPEGMSTNGHELALFSQALDNTQNPHLGMSNNLSGDGEESSSDA 593
+ ++ + A+ G + + A A + + +P ++ S D +SSS+A
Sbjct: 678 ILDQPVMEPEEAASNGSLEDPLDFADSDAARERSDDPQSVRESSASSDESDSSSEA 733
Score = 29.1 bits (62), Expect = 2.5
Identities = 36/134 (26%), Positives = 48/134 (35%), Gaps = 5/134 (3%)
Frame = +3
Query: 207 GLTEVPAPAPVSLDQKSSPSASSWTETGSGGSRDNR-EPQQREGRRLRRPEDGSANTPPP 383
G E P A LD SS + S S + P+Q++ + + S PPP
Sbjct: 868 GSHEDPTAARERLDDPQGLRESSPSSDESDSSSEAPGSPRQQDPEPIEAFTEASEAPPPP 927
Query: 384 KRARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHELALFSQALDNTQNPHLGMSNNLS 563
S D + E AA S EG + A+ Q N HL N S
Sbjct: 928 PNQGSEDPESILDQPAMEPEEAASNGSLEGPMDHTDPNAV--QERSNDPQVHLDSFNESS 985
Query: 564 ----GDGEESSSDA 593
G+G S S+A
Sbjct: 986 DESNGEGSSSPSEA 999
>U39676-5|AAN60531.1| 2329|Caenorhabditis elegans Hypothetical protein
C23F12.1a protein.
Length = 2329
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +3
Query: 210 LTEVPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQREGR-RLRRPEDGSANTPPPK 386
+ + P PAPV L+ S SA + ++ + ++RE + R +R ++ A K
Sbjct: 1083 IVDAPLPAPVVLEPASGASAVASPSLSKKELKEQEKEKKREEKERAKREKEERATLKKEK 1142
Query: 387 RARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHE 494
+++S S+ L S + +GH+
Sbjct: 1143 KSKSHRFPAKTTVSKIPSLSRVGQPSSLVVEVSGHD 1178
>U39676-4|AAN60532.1| 2747|Caenorhabditis elegans Hypothetical protein
C23F12.1b protein.
Length = 2747
Score = 30.3 bits (65), Expect = 1.1
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +3
Query: 210 LTEVPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQREGR-RLRRPEDGSANTPPPK 386
+ + P PAPV L+ S SA + ++ + ++RE + R +R ++ A K
Sbjct: 1083 IVDAPLPAPVVLEPASGASAVASPSLSKKELKEQEKEKKREEKERAKREKEERATLKKEK 1142
Query: 387 RARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHE 494
+++S S+ L S + +GH+
Sbjct: 1143 KSKSHRFPAKTTVSKIPSLSRVGQPSSLVVEVSGHD 1178
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/81 (22%), Positives = 32/81 (39%)
Frame = +3
Query: 186 AQLLQVRGLTEVPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGS 365
A+++ + EVPA P + + S SGG D ++ + P+ +
Sbjct: 1383 AEVIDLSDDDEVPAKKPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPKKAA 1442
Query: 366 ANTPPPKRARSSDLYQAQMKS 428
T PK +D + A K+
Sbjct: 1443 PKTAEPKSKAVTDFFGASKKN 1463
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +3
Query: 330 EGRRLRRPEDGSANTPPPKRARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHELALFS 509
E ++ P SA+ PPPK+ + S+ + M+ E+ + Q P FS
Sbjct: 1405 EAKKDDEPSTSSASAPPPKKKKESEDSEDPMEEDEEEEIIGQKKEPASSRRKSRPTRRFS 1464
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +3
Query: 330 EGRRLRRPEDGSANTPPPKRARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHELALFS 509
E ++ P SA+ PPPK+ + S+ + M+ E+ + Q P FS
Sbjct: 1405 EAKKDDEPSTSSASAPPPKKKKESEDSEDPMEEDEEEEIIGQKKEPASSRRKSRPTRRFS 1464
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/81 (22%), Positives = 32/81 (39%)
Frame = +3
Query: 186 AQLLQVRGLTEVPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGS 365
A+++ + EVPA P + + S SGG D ++ + P+ +
Sbjct: 1383 AEVIDLSDDDEVPAKKPAPAKKAAPKKKKSEFSDLSGGDSDEEAEKKPSTSKKPSPKKAA 1442
Query: 366 ANTPPPKRARSSDLYQAQMKS 428
T PK +D + A K+
Sbjct: 1443 PKTAEPKSKAVTDFFGASKKN 1463
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 29.9 bits (64), Expect = 1.4
Identities = 38/144 (26%), Positives = 60/144 (41%), Gaps = 6/144 (4%)
Frame = +3
Query: 174 FLKAAQLLQVRGLTEVPAPAPVSLDQKSSPSASSWTETGS--GGSRDNREPQQREGRRLR 347
F +Q LQ G +V P +P++++ T +GS GG+ N P
Sbjct: 1002 FSSDSQKLQFGGQQKVEMPKFTGF---GNPASTASTTSGSLFGGASTN-PPMFGGPSSSS 1057
Query: 348 RPEDGSANTPPPKRARSSDL--YQAQMKSRTEQLLAAQGASPE--GMSTNGHELALFSQA 515
P ++N+ SS + + T + A G P G+S++ +LF QA
Sbjct: 1058 IPAFSTSNSSSTSGFPSSTATPFGNAGTTSTSGVFGAFGNKPSQPGLSSSSSTNSLFGQA 1117
Query: 516 LDNTQNPHLGMSNNLSGDGEESSS 587
++ NP G SNN G SS+
Sbjct: 1118 PADSSNPFGGTSNNGFNFGASSST 1141
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +3
Query: 330 EGRRLRRPEDGSANTPPPKRARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHELALFS 509
E ++ P SA+ PPPK+ + S+ + M+ E+ + Q P FS
Sbjct: 1405 EAKKDDEPSTSSASAPPPKKKKESEDSEDPMEEDEEEEIIGQKKEPASSRRKSRPTRRFS 1464
>AF025460-2|AAF02169.3| 545|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 41
protein.
Length = 545
Score = 29.5 bits (63), Expect = 1.9
Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
Frame = +3
Query: 222 PAP-APVSLDQKSSPSASSWTETGSGGSRDNREP---QQREGRRLRRPEDGSANTPPPKR 389
PAP A SS +ASS T T S S + Q+ P D ++ PP
Sbjct: 38 PAPRAGAGAGATSSSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVTSAHAPPPP 97
Query: 390 ARSSDLYQAQMKSRTEQLLAAQGASPEGMSTNGHELA 500
A S+ + A + T Q AA +P S + +A
Sbjct: 98 ASSAPIVGAPRQGATPQ--AAPATTPATTSQHQQSIA 132
>AF016684-6|AAB66210.1| 272|Caenorhabditis elegans Hypothetical
protein F45C12.12 protein.
Length = 272
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Frame = +3
Query: 6 RVVLSACSPYFRRLLKANPCQH--PIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFL 179
+ LS S +F L A+ + P + +RDV +DM LL +Y V + + L
Sbjct: 150 KAFLSFHSDFFHELFSASSTESEIPEIPIRDVSAEDMGLLLSTIYPDLVFPTDKTAAKLL 209
Query: 180 KAAQLLQVRGLT 215
A Q+R +T
Sbjct: 210 TLANRFQMRAVT 221
>U42848-7|AAA83612.2| 567|Caenorhabditis elegans Hypothetical
protein C31H1.8 protein.
Length = 567
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/71 (28%), Positives = 35/71 (49%)
Frame = +3
Query: 264 SASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDLYQAQMKSRTEQL 443
S+ + +T S GS ++ EP+ E ED +A++ SS+ + MKS ++L
Sbjct: 498 SSETCEDTQSVGSSESSEPRSPEFTEYSESEDTAADSETSDSESSSEDEKENMKSSIKEL 557
Query: 444 LAAQGASPEGM 476
+ A PE +
Sbjct: 558 ELIKDA-PEDL 567
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 29.1 bits (62), Expect = 2.5
Identities = 28/111 (25%), Positives = 45/111 (40%)
Frame = +3
Query: 69 HPIVILRDVHDKDMESLLRFMYQGEVHIGQEQLKEFLKAAQLLQVRGLTEVPAPAPVSLD 248
H I+ L + D +++R + + I Q K F A + + ++ VP+ S +
Sbjct: 489 HTIIRLDSI--ADYATMMRRNGEQGIKIQQSDKKSFDTAIDGIPIPSVSMVPSKEQRSHE 546
Query: 249 QKSSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSS 401
S S E S R P +R+ R D S + PP+R R S
Sbjct: 547 DDDKKSRRSRWENTSPIRSPRRSPLRRDNR------DRSRSRSPPRRRRRS 591
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 28.7 bits (61), Expect = 3.3
Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
Frame = +3
Query: 276 WTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRAR--SSDLYQAQMKSRTEQLLA 449
WT T SG P + ++ ++ SA T S S + LL
Sbjct: 480 WTRTASGWIHIKNPPLYKPDGQIYTSDEQSAETKYSSEELYDPSTFLSPSSSSASPALLL 539
Query: 450 AQGASPEGMSTNGHELALFSQ 512
ASP+ S H+L+ SQ
Sbjct: 540 PSDASPQRPSAQEHDLSQLSQ 560
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 246 DQKSSPSAS--SWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDL 407
D+++S +S + + G GG + EP++ E E+ S + P++ DL
Sbjct: 200 DERASIRSSLRNLSSGGQGGEEEEEEPEEDEESESHEEEENSESDDLPRKVEDDDL 255
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 246 DQKSSPSAS--SWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDL 407
D+++S +S + + G GG + EP++ E E+ S + P++ DL
Sbjct: 2372 DERASIRSSLRNLSSGGQGGEEEEEEPEEDEESESHEEEENSESDDLPRKVEDDDL 2427
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = +3
Query: 246 DQKSSPSAS--SWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDL 407
D+++S +S + + G GG + EP++ E E+ S + P++ DL
Sbjct: 2400 DERASIRSSLRNLSSGGQGGEEEEEEPEEDEESESHEEEENSESDDLPRKVEDDDL 2455
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +3
Query: 237 VSLDQKSSPSASSWTETGSGGSRDNREPQQREG----RRLRRPEDGSANT--PPPKRARS 398
V+L + PS G GG R +R P++R R R P + T PP + R
Sbjct: 92 VTLAKYDRPSDERGGRGGGGGRRRSRSPRRRSRSPRYSRSRSPRRSRSRTRSPPSRDRRD 151
Query: 399 SDLYQAQMKSRTEQLLAAQGASPE 470
S + +SR+ + SP+
Sbjct: 152 SPDRRDNSRSRSRSPPPREDGSPK 175
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 27.9 bits (59), Expect = 5.8
Identities = 31/111 (27%), Positives = 44/111 (39%)
Frame = +3
Query: 255 SSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDLYQAQMKSRT 434
+S S ET GSR EP +R G + +DGS P+ R ++ K
Sbjct: 592 TSTSTPMAVETKPNGSRTTEEPLKRMG---KSGDDGSQE---PQGIRHPAIFST--KIGD 643
Query: 435 EQLLAAQGASPEGMSTNGHELALFSQALDNTQNPHLGMSNNLSGDGEESSS 587
E AA GASP ST+ + Q T S ++ G +S+
Sbjct: 644 EAAAAAAGASP---STSAPSTSTSVQTKTTTSPTKSPTSTTITTSGTTTSA 691
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +3
Query: 291 SGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDLYQAQMKSRTEQ 440
S S N P+ GR R ED PP + RSS +Q++ EQ
Sbjct: 182 SSRSARNEGPRAETGREKRSSEDRKRQVPPEEPRRSS--HQSKTAKSEEQ 229
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 27.5 bits (58), Expect = 7.6
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 231 APVSLDQKSSPSASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARS 398
+P ++ SPS S SR P RR R P + P PKRA+S
Sbjct: 313 SPPPARRRRSPSQSKSPAPKRAKSRSKSPPAP--ARRRRSPSASKSPPPAPKRAKS 366
>Z70308-3|CAA94350.1| 207|Caenorhabditis elegans Hypothetical
protein F49E11.6 protein.
Length = 207
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/21 (57%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = +2
Query: 149 YWSGATEGVLEG-GPAASSAW 208
YW+ T G L+ GPAASS+W
Sbjct: 92 YWTSGTIGNLDTFGPAASSSW 112
>Z68131-2|CAA92218.1| 614|Caenorhabditis elegans Hypothetical
protein B0395.3 protein.
Length = 614
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 156 QEQLKEFLKAAQLLQVRGLTEVPAPAPVSLDQKSSPSASSWTETGSGGSRDNREPQQRE 332
++ L F QL +V ++ P P PV + SS S W S +DN + E
Sbjct: 206 EQPLSIFAITQQLAKVVSESQTPNPHPVGI--VSSDSRDKWANVYSSLKKDNNNAKSLE 262
>AL132876-24|CAE17987.1| 405|Caenorhabditis elegans Hypothetical
protein Y105E8A.29 protein.
Length = 405
Score = 27.5 bits (58), Expect = 7.6
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 4/122 (3%)
Frame = +3
Query: 231 APVSLDQKSS-PSASSWTETGSGGSRDNREPQQREGRRLRRPEDGSANTPPPKRARSSDL 407
+P SL + + P T S G+ N QR+ DG TP + + SS L
Sbjct: 3 SPQSLPSRDAIPRTPFDGSTISSGASSNIGGSQRQFSHEVTSPDGD-ETPDSRYSTSSRL 61
Query: 408 YQAQMKSRTEQLLAAQ---GASPEGMSTNGHELALFSQALDNTQNPHLGMSNNLSGDGEE 578
Y+ S LLAA+ P H L++ S NT++ + SG
Sbjct: 62 YENHSISSPTALLAAELTDDLMPLSEICKNHRLSISSSI--NTEHSQSPPPKSQSGGAPN 119
Query: 579 SS 584
SS
Sbjct: 120 SS 121
>AL117207-22|CAO82073.1| 505|Caenorhabditis elegans Hypothetical
protein Y60A3A.27 protein.
Length = 505
Score = 27.5 bits (58), Expect = 7.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 470 GYEHQRARTGSFQPGFG*HTKSAPWNVKQFVW 565
GY + R G GFG H +A WN ++ W
Sbjct: 228 GYNQRGNRGGQRFGGFGNHENNARWNPQRNQW 259
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 27.5 bits (58), Expect = 7.6
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = -1
Query: 535 GFCVLSKAWLKRASSCPLVLIPSGLAPCAASSCSV 431
G C LS ++ A SCP+V I C SC V
Sbjct: 725 GMCCLSPPLVRHAGSCPIVPISLDAKMCRV-SCKV 758
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,128,962
Number of Sequences: 27780
Number of extensions: 304231
Number of successful extensions: 1279
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1272
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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