Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_K06
         (423 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S77415-1|AAB33341.1|  332|Homo sapiens melanocortin-4 receptor p...    33   0.52 
L08603-1|AAA35791.1|  332|Homo sapiens melanocortin 4 receptor p...    33   0.52 
EF080883-1|ABK35300.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 
EF080881-1|ABK35298.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 
EF080880-1|ABK35297.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 
BC111992-1|AAI11993.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 
BC101802-1|AAI01803.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 
BC069172-1|AAH69172.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 
AY236539-1|AAO92061.1|  332|Homo sapiens melanocortin 4 receptor...    33   0.52 

>S77415-1|AAB33341.1|  332|Homo sapiens melanocortin-4 receptor
           protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>L08603-1|AAA35791.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>EF080883-1|ABK35300.1|  332|Homo sapiens melanocortin 4 receptor
           variant protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>EF080881-1|ABK35298.1|  332|Homo sapiens melanocortin 4 receptor
           variant protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>EF080880-1|ABK35297.1|  332|Homo sapiens melanocortin 4 receptor
           variant protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>BC111992-1|AAI11993.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>BC101802-1|AAI01803.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>BC069172-1|AAH69172.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


>AY236539-1|AAO92061.1|  332|Homo sapiens melanocortin 4 receptor
           protein.
          Length = 332

 Score = 32.7 bits (71), Expect = 0.52
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = +3

Query: 294 LFYLTCPQIIYFQCFKLHYNQHLL 365
           +FY++CPQ  Y  CF  H+N +L+
Sbjct: 266 IFYISCPQNPYCVCFMSHFNLYLI 289


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,057,971
Number of Sequences: 237096
Number of extensions: 1283181
Number of successful extensions: 1800
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1800
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3259265358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)