Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K05
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5 pr... 110 2e-24
BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5 pr... 110 2e-24
AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5 va... 110 2e-24
AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5 pr... 110 2e-24
U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5 prot... 106 3e-23
AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5 va... 91 2e-18
X57347-1|CAA40622.1| 245|Homo sapiens HS1 protein. 31 1.2
X56468-1|CAA39840.1| 245|Homo sapiens 14.3.3 protein protein. 31 1.2
BT020014-1|AAV38817.1| 245|Homo sapiens tyrosine 3-monooxygenas... 31 1.2
BC093019-1|AAH93019.1| 245|Homo sapiens tyrosine 3-monooxygenas... 31 1.2
BC056867-1|AAH56867.1| 245|Homo sapiens tyrosine 3-monooxygenas... 31 1.2
BC050601-1|AAH50601.1| 245|Homo sapiens tyrosine 3-monooxygenas... 31 1.2
BC001197-1|AAH01197.1| 245|Homo sapiens YWHAQ protein protein. 31 1.2
AF070556-1|AAC28640.1| 173|Homo sapiens 14.3.3 protein protein. 31 1.2
AC073195-2|AAX93143.1| 147|Homo sapiens unknown protein. 31 1.2
BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2 prot... 31 2.0
>BC018151-1|AAH18151.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 110 bits (265), Expect = 2e-24
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +3
Query: 255 AGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 416
AGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 119 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 244
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>BC015405-1|AAH15405.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 110 bits (265), Expect = 2e-24
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +3
Query: 255 AGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 416
AGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 119 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 244
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>AK223106-1|BAD96826.1| 204|Homo sapiens ribosomal protein S5
variant protein.
Length = 204
Score = 110 bits (265), Expect = 2e-24
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +3
Query: 255 AGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 416
AGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 119 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 244
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>AB061853-1|BAB79493.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 110 bits (265), Expect = 2e-24
Identities = 51/54 (94%), Positives = 52/54 (96%)
Frame = +3
Query: 255 AGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 416
AGRYA KRFRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 53 AGRYAAKRFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 119 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 244
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>U14970-1|AAA85658.1| 204|Homo sapiens ribosomal protein S5
protein.
Length = 204
Score = 106 bits (254), Expect = 3e-23
Identities = 49/54 (90%), Positives = 50/54 (92%)
Frame = +3
Query: 255 AGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 416
AGRYA FRKAQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 53 AGRYAANAFRKAQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 106
Score = 70.9 bits (166), Expect = 2e-12
Identities = 30/42 (71%), Positives = 37/42 (88%)
Frame = +2
Query: 119 PQPADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLP 244
P A+ P+IKLFG+WS DVQ++D+SLQDYI+VKEKYAKYLP
Sbjct: 9 PAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLP 50
>AB209803-1|BAD93040.1| 107|Homo sapiens ribosomal protein S5
variant protein.
Length = 107
Score = 90.6 bits (215), Expect = 2e-18
Identities = 41/43 (95%), Positives = 42/43 (97%)
Frame = +3
Query: 288 AQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGE 416
AQCPIVERLTNS+MMHGRNNGKKLM VRIVKHAFEIIHLLTGE
Sbjct: 1 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGE 43
>X57347-1|CAA40622.1| 245|Homo sapiens HS1 protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 162
>X56468-1|CAA39840.1| 245|Homo sapiens 14.3.3 protein protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 162
>BT020014-1|AAV38817.1| 245|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, theta p protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGNDRKQTIDNSQGAYQEAFDISKKEMQP 162
>BC093019-1|AAH93019.1| 245|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, theta p protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 162
>BC056867-1|AAH56867.1| 245|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, theta p protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 162
>BC050601-1|AAH50601.1| 245|Homo sapiens tyrosine
3-monooxygenase/tryptophan 5-monooxygenase activation
protein, theta p protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 162
>BC001197-1|AAH01197.1| 245|Homo sapiens YWHAQ protein protein.
Length = 245
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 118 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 162
>AF070556-1|AAC28640.1| 173|Homo sapiens 14.3.3 protein protein.
Length = 173
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 46 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 90
>AC073195-2|AAX93143.1| 147|Homo sapiens unknown protein.
Length = 147
Score = 31.5 bits (68), Expect = 1.2
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +2
Query: 206 YISVKEKYAKYLPTIXCWQVRSQTIP*SSVPYCGAFD*LLNDARP 340
Y+ +K Y +YL + C R QTI S Y AFD + +P
Sbjct: 20 YLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQP 64
>BC033758-1|AAH33758.1| 380|Homo sapiens centaurin, alpha 2
protein.
Length = 380
Score = 30.7 bits (66), Expect = 2.0
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 51 WLRRTGPKKSPTRAAWLWTTCHYHSRLIFPKS 146
++ +TGPKK P + W CH RL++ K+
Sbjct: 261 FMEKTGPKKEPFKKRWFALDCH-ERRLLYYKN 291
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 60,311,993
Number of Sequences: 237096
Number of extensions: 1262252
Number of successful extensions: 5927
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5927
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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