Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K04
(546 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde dehydr... 162 2e-40
AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde dehy... 160 7e-40
U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde dehydr... 111 3e-25
Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical p... 100 6e-22
Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical p... 100 6e-22
Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical pr... 72 2e-13
U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde dehydr... 65 3e-11
U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde dehydr... 65 3e-11
AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde dehy... 63 1e-10
AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde dehy... 63 1e-10
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde dehydr... 58 3e-09
U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde dehydr... 38 0.006
AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde dehy... 29 1.7
Z75547-6|CAA99903.1| 377|Caenorhabditis elegans Hypothetical pr... 28 5.0
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ... 28 5.0
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein. 28 5.0
Z82285-4|CAD56247.1| 392|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z82285-3|CAD56246.1| 573|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde dehy... 27 8.8
AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde dehy... 27 8.8
AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde dehy... 27 8.8
AC024882-4|AAF60933.2| 338|Caenorhabditis elegans Seven tm rece... 27 8.8
>U12966-1|AAA20615.3| 510|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform a protein.
Length = 510
Score = 162 bits (393), Expect = 2e-40
Identities = 84/155 (54%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
Frame = +2
Query: 80 KYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWR 259
+YT +FINNE+V A S KTF TINP + V+ QVAEG F SEWR
Sbjct: 28 QYTGIFINNEFVPAKSGKTFETINPANGKVLAQVAEGDKTDVNIAVKAAQNAFRIGSEWR 87
Query: 260 LLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWAS-GIVRYYAGKAD 436
+DASQRG+LL +LA LMERD LA LE+LDNGKP A L S +RYYAG AD
Sbjct: 88 RMDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWAD 147
Query: 437 KILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 541
K G TIP +G+ T+T EPVGVCGQI+PWN+P+
Sbjct: 148 KNHGKTIPIEGDYFTYTRHEPVGVCGQIIPWNFPL 182
>AF106575-1|AAC78174.2| 537|Caenorhabditis elegans Aldehyde
dehydrogenase protein 2 protein.
Length = 537
Score = 160 bits (388), Expect = 7e-40
Identities = 86/174 (49%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Frame = +2
Query: 23 SIARLFTRVNFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXX 202
S ARLF+++ +K + +LFINNE+VDA S KTF +NP + ++ +VAEG
Sbjct: 40 SCARLFSKIYVLKATNL----FQLFINNEFVDAKSGKTFEFVNPANGKLLAKVAEGNRDD 95
Query: 203 XXXXXXXXXXXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAE 382
F SEWR +DAS RG+LL +LA LMERD LA LE+LDNGKP K+A
Sbjct: 96 VDIAVEAAKKAFKIGSEWRRMDASHRGVLLNRLADLMERDRVILASLESLDNGKPYKEAY 155
Query: 383 QEVLWAS-GIVRYYAGKADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 541
L S RYYAG ADK G TIP G+ T+T EPVGVCGQI+PWN+P+
Sbjct: 156 NIDLPISIKTFRYYAGYADKNHGKTIPVGGDYFTYTRHEPVGVCGQIIPWNFPL 209
>U12966-2|AAN63391.1| 422|Caenorhabditis elegans Aldehyde
dehydrogenase protein1, isoform b protein.
Length = 422
Score = 111 bits (267), Expect = 3e-25
Identities = 56/94 (59%), Positives = 67/94 (71%), Gaps = 1/94 (1%)
Frame = +2
Query: 263 LDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWAS-GIVRYYAGKADK 439
+DASQRG+LL +LA LMERD LA LE+LDNGKP A L S +RYYAG ADK
Sbjct: 1 MDASQRGVLLNRLADLMERDRVILASLESLDNGKPYAVAYNADLPLSIKTLRYYAGWADK 60
Query: 440 ILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 541
G TIP +G+ T+T EPVGVCGQI+PWN+P+
Sbjct: 61 NHGKTIPIEGDYFTYTRHEPVGVCGQIIPWNFPL 94
>Z68760-14|CAA92998.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 100 bits (240), Expect = 6e-22
Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Frame = +2
Query: 95 FINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDAS 274
FI+ ++V + +TF TINP E I ++ F R EWR + A
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFER-GEWRQMSAR 489
Query: 275 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQA-EQEVLWASGIVRYYAGKADKILGN 451
+RG L+KLA LME + LA LE+LD G A + V + + RY+AG DKI G
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGWCDKIQGK 549
Query: 452 TIPAD----GEVLTFTLKEPVGVCGQILPWNYPI 541
TIP + L TL+EP+GV G I PWNYP+
Sbjct: 550 TIPISNARPNKNLCLTLREPIGVVGLITPWNYPL 583
>Z68748-13|CAA92957.2| 908|Caenorhabditis elegans Hypothetical
protein F36H1.6 protein.
Length = 908
Score = 100 bits (240), Expect = 6e-22
Identities = 60/154 (38%), Positives = 80/154 (51%), Gaps = 5/154 (3%)
Frame = +2
Query: 95 FINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDAS 274
FI+ ++V + +TF TINP E I ++ F R EWR + A
Sbjct: 431 FIDGKFVGSSDGRTFKTINPATEKPICELPLATVADVDRAVRAAKKAFER-GEWRQMSAR 489
Query: 275 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQA-EQEVLWASGIVRYYAGKADKILGN 451
+RG L+KLA LME + LA LE+LD G A + V + + RY+AG DKI G
Sbjct: 490 ERGKRLYKLAELMEEHKEELATLESLDAGAVYTLALKTHVGMSIDVWRYFAGWCDKIQGK 549
Query: 452 TIPAD----GEVLTFTLKEPVGVCGQILPWNYPI 541
TIP + L TL+EP+GV G I PWNYP+
Sbjct: 550 TIPISNARPNKNLCLTLREPIGVVGLITPWNYPL 583
>Z81538-1|CAB04383.1| 569|Caenorhabditis elegans Hypothetical
protein F45H10.1 protein.
Length = 569
Score = 72.1 bits (169), Expect = 2e-13
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Frame = +2
Query: 95 FINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDAS 274
+I +W + + +F +NP + V+ + F +++ A
Sbjct: 21 YIGGKWTASETGNSFDVLNPFNNEVVDRATNCTVKDAEKAVHSALEGFDKWAH--TYSAK 78
Query: 275 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILGNT 454
QRG +L K ++ + LA L T + GKP+ +A E+ +++ +YAG+A ++ G
Sbjct: 79 QRGAILHKWFEILVQRETELATLLTKEQGKPLAEARGEIQYSAAYFDWYAGEARRVYGQV 138
Query: 455 IP-ADGEVLTFTLKEPVGVCGQILPWNYP 538
+P A L +EP+GV I PWN+P
Sbjct: 139 VPSAVVNRLHLHTREPIGVVALIAPWNFP 167
>U00051-9|AAM29693.1| 503|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform b protein.
Length = 503
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +2
Query: 251 EWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGK 430
+W +R +L K L++ +A E + NGKP+ +A+ +VL +Y+G
Sbjct: 74 QWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEAKADVLSCVDTFYFYSGI 133
Query: 431 ADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 541
A +LG +P D +T + PVGV I WNYPI
Sbjct: 134 ASDLLGQHVPLDASRYAYTRRLPVGVVAAIGAWNYPI 170
>U00051-8|AAA91356.1| 687|Caenorhabditis elegans Aldehyde
dehydrogenase protein11, isoform a protein.
Length = 687
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/97 (32%), Positives = 49/97 (50%)
Frame = +2
Query: 251 EWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGK 430
+W +R +L K L++ +A E + NGKP+ +A+ +VL +Y+G
Sbjct: 258 QWAKSSWMERSEILKKTGDLLKTHCNDIAYWECISNGKPIAEAKADVLSCVDTFYFYSGI 317
Query: 431 ADKILGNTIPADGEVLTFTLKEPVGVCGQILPWNYPI 541
A +LG +P D +T + PVGV I WNYPI
Sbjct: 318 ASDLLGQHVPLDASRYAYTRRLPVGVVAAIGAWNYPI 354
>AC006814-2|AAP46269.1| 430|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform b protein.
Length = 430
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Frame = +2
Query: 65 VKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHR 244
V D+ F+N + S +TF I P+ V+ + +
Sbjct: 5 VPSDLSGGLYFLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADAQSA 64
Query: 245 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 424
+ E LD RG +L K+A L+ A+ +A E NGKP+ +A ++ ++ ++
Sbjct: 65 WGETTALD---RGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFFG 121
Query: 425 GKADKIL-GNTIPADG---EVLTFTLKEPVGVCGQILPWNYP 538
G A +L G+++ G + + +T +EP GV G I WNYP
Sbjct: 122 GIATAVLQGDSLELPGGPSQRIAYTRREPYGVVGCIGAWNYP 163
>AC006814-1|AAP46268.1| 499|Caenorhabditis elegans Aldehyde
dehydrogenase protein12, isoform a protein.
Length = 499
Score = 62.9 bits (146), Expect = 1e-10
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 4/162 (2%)
Frame = +2
Query: 65 VKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHR 244
V D+ F+N + S +TF I P+ V+ + +
Sbjct: 5 VPSDLSGGLYFLNGKRTTIESTETFDVIEPRIGQVVAKCPKATADIVDQYVKAAADAQSA 64
Query: 245 YSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYA 424
+ E LD RG +L K+A L+ A+ +A E NGKP+ +A ++ ++ ++
Sbjct: 65 WGETTALD---RGKVLHKVADLIREHAEEIAIWEVKTNGKPIYEARCDIASSADTFDFFG 121
Query: 425 GKADKIL-GNTIPADG---EVLTFTLKEPVGVCGQILPWNYP 538
G A +L G+++ G + + +T +EP GV G I WNYP
Sbjct: 122 GIATAVLQGDSLELPGGPSQRIAYTRREPYGVVGCIGAWNYP 163
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 62.1 bits (144), Expect = 3e-10
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Frame = +2
Query: 89 KLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLD 268
KL+I+ + V++ + NP VI V F+ W+
Sbjct: 31 KLWIDGQAVESKTTDFVELTNPATNEVIAMVPNATQAEMQAAVDSAKNAFNT---WKNTS 87
Query: 269 ASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWASGIVRYYAGKADKILG 448
R +FKL L++RD K LAE T++ GK + AE +V +V + ++G
Sbjct: 88 PLTRQQCMFKLQALIKRDMKKLAESITIEQGKTLPDAEGDVSRGLQVVEHACSVPSLMMG 147
Query: 449 NTIP-ADGEVLTFTLKEPVGVCGQILPWNYP 538
T+P ++ T + + P+GV I P+N+P
Sbjct: 148 ETLPNVSRDMDTHSYRIPLGVTAGICPFNFP 178
>U46673-3|AAC48151.1| 506|Caenorhabditis elegans Aldehyde
dehydrogenase protein 10 protein.
Length = 506
Score = 58.4 bits (135), Expect = 3e-09
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Frame = +2
Query: 95 FINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXXXXXXXFHRYSEWRLLDAS 274
FI NE+ A S+K ++NP +++ +G F W+
Sbjct: 31 FIGNEF--ARSEKLMDSVNPSTGKPWIKIPDGTAREVDQAVEAAKEAF---KTWKKTTVQ 85
Query: 275 QRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAE-QEVLWASGIVRYYAGKADKILG- 448
QR LL K+A L+E +A LE+ D GKP+ A+ ++ R +A A L
Sbjct: 86 QRSALLNKVANLIEEFNDDIAILESRDQGKPIGLAKVMDIPRCVQNFRDFANAALYSLST 145
Query: 449 NTI--PADGEVLTFTLKEPVGVCGQILPWNYPI 541
+TI G+ + + +PVGV G I PWN P+
Sbjct: 146 STILEQPTGKFVNYVKNDPVGVAGLISPWNLPL 178
>U13070-4|AAC46640.2| 531|Caenorhabditis elegans Aldehyde
dehydrogenase protein 9 protein.
Length = 531
Score = 37.5 bits (83), Expect = 0.006
Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 2/168 (1%)
Frame = +2
Query: 41 TRVNFIKMVKVDIKYTKLFINNEWVDAVSKKTFPTINPQDESVIVQVAEGXXXXXXXXXX 220
++ F+K + + +F + +W A S + + P + S I V G
Sbjct: 27 SKYGFLKELGLTENNAGVF-HGKW--AASGQVVQSFAPANNSPIANVQNGNVQDYEIAIS 83
Query: 221 XXXXXFHRYSEWRLLDASQRGLLLFKLATLMERDAKYLAELETLDNGKPVKQAEQEVLWA 400
Y++W + A +RG ++ ++ + + L +L +L+ GK + EV
Sbjct: 84 EAKKA---YNDWCEVPAPRRGEIVRQIGDKLRTQLQNLGKLVSLEMGKISAEGVGEVQEY 140
Query: 401 SGIVRYYAGKADKILGNTIPAD--GEVLTFTLKEPVGVCGQILPWNYP 538
I Y G + + G P++ G L P+GV G I +N+P
Sbjct: 141 VDICDYATGLSRSLEGKIFPSERPGHAL-LEQWNPLGVVGVISAFNFP 187
>AF039039-7|AAB94178.1| 437|Caenorhabditis elegans Aldehyde
dehydrogenase protein 5 protein.
Length = 437
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 452 TIPADGEVLTFTLKEPVGVCGQILPWNYPI 541
T+P D + +K+P GV I PWNYP+
Sbjct: 92 TLPTDKP---YIVKDPKGVVLVISPWNYPV 118
>Z75547-6|CAA99903.1| 377|Caenorhabditis elegans Hypothetical
protein R11D1.5 protein.
Length = 377
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -2
Query: 434 QLFRRNI*RFLMPTRLLVLLASLVFRCPVFRV 339
QLFR + + +P LL + S+VF CP+ +V
Sbjct: 275 QLFRALVIQAAIPLLLLYIPCSIVFICPLIQV 306
>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 74 DIKYTKLFINNEWVDAVSKKTFPTINPQDES 166
DI+ K F+N+EW A ++ P + P +S
Sbjct: 323 DIRNHKFFVNDEWTFATLREASPPVIPSLKS 353
>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
Length = 1173
Score = 27.9 bits (59), Expect = 5.0
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 74 DIKYTKLFINNEWVDAVSKKTFPTINPQDES 166
DI+ K F+N+EW A ++ P + P +S
Sbjct: 323 DIRNHKFFVNDEWTFATLREASPPVIPSLKS 353
>Z82285-4|CAD56247.1| 392|Caenorhabditis elegans Hypothetical
protein T28F3.4b protein.
Length = 392
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -3
Query: 208 VDVSLVTLSNLDDDTLIL---RIDCREGFLADSVHPFVVNEQLSILDVYFNHFYK 53
+D ++V SN + +L++ +I FLA + FV+N +++L +Y +++K
Sbjct: 278 LDANVVRRSNKTNRSLVVPYSKILKSPAFLAQLLCQFVINFIVTLLQIYLPNYFK 332
>Z82285-3|CAD56246.1| 573|Caenorhabditis elegans Hypothetical
protein T28F3.4a protein.
Length = 573
Score = 27.1 bits (57), Expect = 8.8
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = -3
Query: 208 VDVSLVTLSNLDDDTLIL---RIDCREGFLADSVHPFVVNEQLSILDVYFNHFYK 53
+D ++V SN + +L++ +I FLA + FV+N +++L +Y +++K
Sbjct: 278 LDANVVRRSNKTNRSLVVPYSKILKSPAFLAQLLCQFVINFIVTLLQIYLPNYFK 332
>Z82054-2|CAN86644.1| 316|Caenorhabditis elegans Hypothetical
protein T26F2.3 protein.
Length = 316
Score = 27.1 bits (57), Expect = 8.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 271 FTKRPTALQTGHPHGERRKIFSRTRNTGQRKTSEASRTRSL 393
F K T + GHPH K+ + T + +TS SR ++
Sbjct: 138 FEKYMTLNEVGHPHNPNEKVSNATCSKVVLRTSFVSRKETI 178
>AF016452-9|AAO26003.1| 494|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform c protein.
Length = 494
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 491 KEPVGVCGQILPWNYPI 541
K+P GV I PWNYP+
Sbjct: 101 KDPKGVVLIISPWNYPV 117
>AF016452-8|AAM45357.1| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform b protein.
Length = 493
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 491 KEPVGVCGQILPWNYPI 541
K+P GV I PWNYP+
Sbjct: 101 KDPKGVVLIISPWNYPV 117
>AF016452-7|AAB66022.2| 493|Caenorhabditis elegans Aldehyde
dehydrogenase protein4, isoform a protein.
Length = 493
Score = 27.1 bits (57), Expect = 8.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +2
Query: 491 KEPVGVCGQILPWNYPI 541
K+P GV I PWNYP+
Sbjct: 101 KDPKGVVLIISPWNYPV 117
>AC024882-4|AAF60933.2| 338|Caenorhabditis elegans Seven tm
receptor protein 158 protein.
Length = 338
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 434 QLFRRNI*RFLMPTRLLVLLASLVFRCPVFRV 339
QL++ I +FL+P L L S CP+F++
Sbjct: 248 QLYKALIAQFLIPMLFLFLPTSTFISCPLFKL 279
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,976,638
Number of Sequences: 27780
Number of extensions: 234830
Number of successful extensions: 786
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 745
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 771
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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