BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_K01
(562 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 23 1.6
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 2.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 2.1
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.1
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.8
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.8
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.8
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.8
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 22 3.7
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 4.9
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 21 6.4
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 21 6.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 21 6.4
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 21 6.4
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.4 bits (48), Expect = 1.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 219 VMEELKRIIVDSEIMHEDDRLWPQPDRVGRQELEIVI 329
+ME++ ++ + +HE D L RVG + I++
Sbjct: 39 LMEQILLAKIEKQNLHESDDLHESDGRVGGKRRNILL 75
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 389 LVHINQGPSFGSSKRNMLFSNHYFQL 312
++ I GP+F K +M++ YF L
Sbjct: 516 MMRIFLGPAFDEIKHDMVYLQKYFYL 541
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.0 bits (47), Expect = 2.1
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = -3
Query: 389 LVHINQGPSFGSSKRNMLFSNHYFQL 312
++ I GP+F K +M++ YF L
Sbjct: 516 MMRIFLGPAFDEIKHDMVYLQKYFYL 541
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.0 bits (47), Expect = 2.1
Identities = 8/28 (28%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
Frame = -3
Query: 362 FGSSKRNMLFSNH--YFQLLSADSIWLW 285
+G S +++ N +F +++ DS+W W
Sbjct: 433 YGHSSGSVIDRNGVMFFNMVTRDSVWCW 460
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 99 KFGHEFLEFEFRPDGKLRYANNSNYK 176
K+ EFL + D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 99 KFGHEFLEFEFRPDGKLRYANNSNYK 176
K+ EFL + D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 99 KFGHEFLEFEFRPDGKLRYANNSNYK 176
K+ EFL + D +LRY+N S Y+
Sbjct: 157 KYEVEFLLQQQWYDPRLRYSNRSQYE 182
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 2.8
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 99 KFGHEFLEFEFRPDGKLRYANNSNYK 176
K+ EFL + D +LRY+N S Y+
Sbjct: 106 KYEVEFLLQQQWYDPRLRYSNRSQYE 131
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 3.7
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 156 ANNSNYKNDTMIRKEAYVHPCVMEEL 233
+N SNY ND K+ Y + +E++
Sbjct: 91 SNISNYNNDNNYNKKLYYNINYIEQI 116
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 299 SIWLWPQTIIFVHDFRVYNY 240
+I ++PQ HD+RV+N+
Sbjct: 169 AITIFPQRTDGKHDYRVWNH 188
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 406 PSGSRDWFTSTKDPV 362
PS + W TS +DPV
Sbjct: 402 PSALQMWSTSLRDPV 416
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 406 PSGSRDWFTSTKDPV 362
PS + W TS +DPV
Sbjct: 402 PSALQMWSTSLRDPV 416
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = -1
Query: 397 SRDWFTSTKDPVLEVVKEICSSPITISNSCL 305
SRDWF + V + I + + + C+
Sbjct: 22 SRDWFRISAGCVSRISNRISRNRVLLRGQCI 52
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 21.4 bits (43), Expect = 6.4
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -1
Query: 406 PSGSRDWFTSTKDPV 362
PS + W TS +DPV
Sbjct: 28 PSALQMWSTSLRDPV 42
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,870
Number of Sequences: 438
Number of extensions: 3294
Number of successful extensions: 16
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -