Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J24
         (491 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058538-1|AAL13767.1|  268|Drosophila melanogaster LD24139p pro...    37   0.013
AE014297-430|AAF51893.1|  268|Drosophila melanogaster CG1155-PA ...    37   0.013
AF231039-1|AAF34808.1|  268|Drosophila melanogaster SP558 protei...    37   0.017

>AY058538-1|AAL13767.1|  268|Drosophila melanogaster LD24139p
           protein.
          Length = 268

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 110 PCAANEDEGKLELFSRVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT-PFL 286
           P  A+E  G+L   + V    D    + L  K      ++ AR  +E RGKIKK   P  
Sbjct: 104 PQNADERTGRLVDLA-VSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKKMLGPVA 162

Query: 287 AGVGVKVIAVVRLLFG 334
             +G K+ AV+ L+ G
Sbjct: 163 LAIGAKLFAVIPLVLG 178


>AE014297-430|AAF51893.1|  268|Drosophila melanogaster CG1155-PA
           protein.
          Length = 268

 Score = 37.1 bits (82), Expect = 0.013
 Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
 Frame = +2

Query: 110 PCAANEDEGKLELFSRVVIEKDASGENKLNVKFEPGELREAARTFEEARGKIKKYT-PFL 286
           P  A+E  G+L   + V    D    + L  K      ++ AR  +E RGKIKK   P  
Sbjct: 104 PQNADERTGRLVDLA-VSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKKMLGPVA 162

Query: 287 AGVGVKVIAVVRLLFG 334
             +G K+ AV+ L+ G
Sbjct: 163 LAIGAKLFAVIPLVLG 178


>AF231039-1|AAF34808.1|  268|Drosophila melanogaster SP558 protein
           protein.
          Length = 268

 Score = 36.7 bits (81), Expect = 0.017
 Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
 Frame = +2

Query: 122 NEDEGKLELFSRVVIEK-DASGENKLNVKFEPGELREAARTFEEARGKIKKYT-PFLAGV 295
           N DE    L    V    D    + L  K      ++ AR  +E RGKIKK   P    +
Sbjct: 106 NADERTRRLVDLAVSSAADFLSTHNLEFKLPAETTQQVARALDEGRGKIKKMLGPVALAI 165

Query: 296 GVKVIAVVRLLFG 334
           G K+ AV+ L+ G
Sbjct: 166 GAKLFAVIPLVLG 178


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,802,991
Number of Sequences: 53049
Number of extensions: 362079
Number of successful extensions: 994
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 992
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)