Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J24
         (491 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   3.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.1  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   7.1  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.4  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +1

Query: 310 CRGAPSLRWFDITGD 354
           C  A  LRWF+I  D
Sbjct: 23  CSAASGLRWFEIWRD 37


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 15/39 (38%), Positives = 18/39 (46%)
 Frame = +2

Query: 119 ANEDEGKLELFSRVVIEKDASGENKLNVKFEPGELREAA 235
           +NEDE +  L   VVI  D S E  L    E    R +A
Sbjct: 434 SNEDEDETPLDPVVVISNDKSTEFFLATVVEEAACRFSA 472


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 7.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 256 W*NKEVYTIPGWR 294
           W NK   T+P WR
Sbjct: 75  WRNKLFVTVPRWR 87


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 9.4
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 108 AALQATTMHNTKHNTRIFSKF 46
           + L +T  + +KHNT+ F+++
Sbjct: 378 SCLGSTETYYSKHNTQQFTQY 398


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,061
Number of Sequences: 438
Number of extensions: 2237
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13544190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)