Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J23
(637 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456904-1|CAG33185.1| 106|Homo sapiens NDUFS5 protein. 52 1e-06
BC093057-1|AAH93057.1| 106|Homo sapiens NADH dehydrogenase (ubi... 52 1e-06
BC001884-1|AAH01884.1| 106|Homo sapiens NADH dehydrogenase (ubi... 52 1e-06
AL606465-3|CAI16711.1| 106|Homo sapiens NADH dehydrogenase (ubi... 52 1e-06
AF020352-1|AAB87866.1| 106|Homo sapiens NADH:ubiquinone oxidore... 52 1e-06
AF489528-1|AAM03124.1| 1394|Homo sapiens transforming growth fac... 31 2.6
M34057-1|AAA61160.1| 1394|Homo sapiens TGFB1 protein. 31 4.5
BC130289-1|AAI30290.1| 1395|Homo sapiens latent transforming gro... 30 7.9
AC020594-1|AAY15036.1| 150|Homo sapiens unknown protein. 30 7.9
AB208801-1|BAD92038.1| 1348|Homo sapiens latent transforming gro... 30 7.9
>CR456904-1|CAG33185.1| 106|Homo sapiens NDUFS5 protein.
Length = 106
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 55 ITGGLVSHQLLGRCQKEEARYMDCLEAYGLERGKVKCADIFEDFHECQTLTKQFKRFMAM 234
I G +++ GRC E +++C G R + +C ++DF EC K +R +
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 235 RAERDRQISEGKLT 276
R +RD+ I EGK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>BC093057-1|AAH93057.1| 106|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
reductas protein.
Length = 106
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 55 ITGGLVSHQLLGRCQKEEARYMDCLEAYGLERGKVKCADIFEDFHECQTLTKQFKRFMAM 234
I G +++ GRC E +++C G R + +C ++DF EC K +R +
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 235 RAERDRQISEGKLT 276
R +RD+ I EGK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>BC001884-1|AAH01884.1| 106|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
reductas protein.
Length = 106
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 55 ITGGLVSHQLLGRCQKEEARYMDCLEAYGLERGKVKCADIFEDFHECQTLTKQFKRFMAM 234
I G +++ GRC E +++C G R + +C ++DF EC K +R +
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 235 RAERDRQISEGKLT 276
R +RD+ I EGK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>AL606465-3|CAI16711.1| 106|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 5, 15kDa (NADH-coenzyme Q
reductas protein.
Length = 106
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 55 ITGGLVSHQLLGRCQKEEARYMDCLEAYGLERGKVKCADIFEDFHECQTLTKQFKRFMAM 234
I G +++ GRC E +++C G R + +C ++DF EC K +R +
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 235 RAERDRQISEGKLT 276
R +RD+ I EGK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>AF020352-1|AAB87866.1| 106|Homo sapiens NADH:ubiquinone
oxidoreductase 15 kDa IP subunit protein.
Length = 106
Score = 52.4 bits (120), Expect = 1e-06
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +1
Query: 55 ITGGLVSHQLLGRCQKEEARYMDCLEAYGLERGKVKCADIFEDFHECQTLTKQFKRFMAM 234
I G +++ GRC E +++C G R + +C ++DF EC K +R +
Sbjct: 20 IQSGEQPYKMAGRCHAFEKEWIECAHGIGYTRAEKECKIEYDDFVECLLRQKTMRRAGTI 79
Query: 235 RAERDRQISEGKLT 276
R +RD+ I EGK T
Sbjct: 80 RKQRDKLIKEGKYT 93
>AF489528-1|AAM03124.1| 1394|Homo sapiens transforming growth
factor-beta binding protein-1S protein.
Length = 1394
Score = 31.5 bits (68), Expect = 2.6
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 88 GRCQKEEARYM-DCLEAYGLERGKVKCADIFE 180
GRC + + Y DCL+ Y L+ K+ C D+ E
Sbjct: 1307 GRCVRVQEGYTCDCLDGYHLDTAKMTCVDVNE 1338
>M34057-1|AAA61160.1| 1394|Homo sapiens TGFB1 protein.
Length = 1394
Score = 30.7 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 88 GRCQKEEARYM-DCLEAYGLERGKVKCADIFE 180
GRC + + Y DCL+ Y L+ K+ C D+ E
Sbjct: 1307 GRCVRVQEGYTCDCLDGYHLDTAKMTCFDVNE 1338
>BC130289-1|AAI30290.1| 1395|Homo sapiens latent transforming growth
factor beta binding protein 1 protein.
Length = 1395
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 88 GRCQKEEARYM-DCLEAYGLERGKVKCADIFE 180
GRC + + Y DC + Y L+ K+ C D+ E
Sbjct: 1308 GRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNE 1339
>AC020594-1|AAY15036.1| 150|Homo sapiens unknown protein.
Length = 150
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 88 GRCQKEEARYM-DCLEAYGLERGKVKCADIFE 180
GRC + + Y DC + Y L+ K+ C D+ E
Sbjct: 63 GRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNE 94
>AB208801-1|BAD92038.1| 1348|Homo sapiens latent transforming growth
factor beta binding protein 1 isoform LTBP-1S varian
protein.
Length = 1348
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +1
Query: 88 GRCQKEEARYM-DCLEAYGLERGKVKCADIFE 180
GRC + + Y DC + Y L+ K+ C D+ E
Sbjct: 1261 GRCVRVQEGYTCDCFDGYHLDTAKMTCVDVNE 1292
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,705,067
Number of Sequences: 237096
Number of extensions: 1611267
Number of successful extensions: 2720
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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