Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J22
         (525 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF155097-1|AAD42863.1|  310|Homo sapiens NY-REN-7 antigen protein.     32   1.1  
AB018295-1|BAA34472.1|  334|Homo sapiens KIAA0752 protein protein.     32   1.1  
BC131737-1|AAI31738.1|  144|Homo sapiens LOC653316 protein protein.    31   3.3  
BC101340-1|AAI01341.1|  144|Homo sapiens LOC653316 protein protein.    31   3.3  
BC101339-1|AAI01340.1|  144|Homo sapiens LOC653316 protein protein.    31   3.3  

>AF155097-1|AAD42863.1|  310|Homo sapiens NY-REN-7 antigen protein.
          Length = 310

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
 Frame = +3

Query: 165 PTDVEAEVPESQNIREVDPTTSHTASTEEIADGA---SISEYQNGVYTVTKRTYTEQSEV 335
           P    +E     ++ +VDP T   +  E++ +     ++SE   GV+ +     T   ++
Sbjct: 187 PGQTVSEEATGVHMMQVDPATLAKSDLEDLEEHVPEQTVSEEATGVHMMQVDPATLAKQL 246

Query: 336 LEGTKI-VRTTMTLSTGAENVKEMEHDQIVEERPKTKIPKLKFRQAAERVR 485
            + T       M+ S  +   +E      VEE  KT+ PK K R+ +++ R
Sbjct: 247 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKSR 297


>AB018295-1|BAA34472.1|  334|Homo sapiens KIAA0752 protein protein.
          Length = 334

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 4/111 (3%)
 Frame = +3

Query: 165 PTDVEAEVPESQNIREVDPTTSHTASTEEIADGA---SISEYQNGVYTVTKRTYTEQSEV 335
           P    +E     ++ +VDP T   +  E++ +     ++SE   GV+ +     T   ++
Sbjct: 211 PGQTVSEEATGVHMMQVDPATLAKSDLEDLEEHVPEQTVSEEATGVHMMQVDPATLAKQL 270

Query: 336 LEGTKI-VRTTMTLSTGAENVKEMEHDQIVEERPKTKIPKLKFRQAAERVR 485
            + T       M+ S  +   +E      VEE  KT+ PK K R+ +++ R
Sbjct: 271 EDSTITGSHQQMSASPSSAPAEEATEKTKVEEEVKTRKPKKKTRKPSKKSR 321


>BC131737-1|AAI31738.1|  144|Homo sapiens LOC653316 protein protein.
          Length = 144

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +3

Query: 219 PTTSHTASTEEIADGASISEYQNGVYTVTKRTYTEQSEVLEGTKI-VRTTMTLSTGAENV 395
           P        EE   G ++SE   GV+ +     T   ++ + T       M+ S  +   
Sbjct: 42  PQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPA 101

Query: 396 KEMEHDQIVEERPKTKIPKLKFRQAAERVR 485
           +E      VEE  KT+ PK K R+ +++ R
Sbjct: 102 EEATEKTKVEEEVKTRKPKKKTRKPSKKSR 131


>BC101340-1|AAI01341.1|  144|Homo sapiens LOC653316 protein protein.
          Length = 144

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +3

Query: 219 PTTSHTASTEEIADGASISEYQNGVYTVTKRTYTEQSEVLEGTKI-VRTTMTLSTGAENV 395
           P        EE   G ++SE   GV+ +     T   ++ + T       M+ S  +   
Sbjct: 42  PQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPA 101

Query: 396 KEMEHDQIVEERPKTKIPKLKFRQAAERVR 485
           +E      VEE  KT+ PK K R+ +++ R
Sbjct: 102 EEATEKTKVEEEVKTRKPKKKTRKPSKKSR 131


>BC101339-1|AAI01340.1|  144|Homo sapiens LOC653316 protein protein.
          Length = 144

 Score = 30.7 bits (66), Expect = 3.3
 Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 1/90 (1%)
 Frame = +3

Query: 219 PTTSHTASTEEIADGASISEYQNGVYTVTKRTYTEQSEVLEGTKI-VRTTMTLSTGAENV 395
           P        EE   G ++SE   GV+ +     T   ++ + T       M+ S  +   
Sbjct: 42  PQRGDLEDLEEHLPGQTVSEEATGVHMMQVDPATPAKKLEDSTITGSHQQMSASPSSAPA 101

Query: 396 KEMEHDQIVEERPKTKIPKLKFRQAAERVR 485
           +E      VEE  KT+ PK K R+ +++ R
Sbjct: 102 EEATEKTKVEEEVKTRKPKKKTRKPSKKSR 131


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,076,198
Number of Sequences: 237096
Number of extensions: 1289285
Number of successful extensions: 2979
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2979
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)