Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J22
         (525 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    25   0.63 
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       21   5.8  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   5.8  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   7.7  

>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 395 HVLGAGRKCHRCSYDL 348
           + LG G  CH+C Y +
Sbjct: 35  YCLGCGDSCHKCKYGI 50


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/40 (30%), Positives = 16/40 (40%)
 Frame = +3

Query: 144 IQYDYQNPTDVEAEVPESQNIREVDPTTSHTASTEEIADG 263
           I Y Y  P    A  PE++   E DP     A  + +  G
Sbjct: 16  ISYIYAAPEPEPAPEPEAEADAEADPEAGIGAVLKVLTTG 55


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 356 YDLRTFENLTLFRVRPLSDSVDAILVF*NRGAICDFL 246
           Y+LR  E   +     L DS + +L   +R   CD L
Sbjct: 31  YELRQIEEENIEPDTELMDSNEPLLPLRHRRVTCDVL 67


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 201 NIREVDPTTSHTASTEEIADGASISEYQNGVYTVT 305
           N+  VDP   HT  +  +A   ++S  +  +   T
Sbjct: 60  NMENVDPLGIHTGESIVVAPSQTLSNKEYNMLRTT 94


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,257
Number of Sequences: 438
Number of extensions: 2741
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)