Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J18
(300 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 27 0.78
SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual 27 0.78
SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|c... 27 0.78
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 25 3.1
SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 25 3.1
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe... 25 3.1
SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces... 24 4.2
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 24 4.2
SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr... 24 4.2
SPAC23A1.03 |apt1||adenine phosphoribosyltransferase |Schizosacc... 24 4.2
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 24 4.2
SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase Swr1|Schizo... 24 4.2
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 24 5.5
SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr 1||... 24 5.5
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 24 5.5
SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 23 7.3
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 23 7.3
SPBC4B4.04 |||translation initiation factor eIF2A |Schizosacchar... 23 7.3
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 23 7.3
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 23 9.6
SPAC6B12.11 |drc1|sld1|DNA replication protein Drc1|Schizosaccha... 23 9.6
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 23 9.6
SPAC31G5.05c |||ribulose phosphate 3-epimerase |Schizosaccharomy... 23 9.6
SPBC3B9.15c |scp1||sterol regulatory element binding protein Scp... 23 9.6
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 26.6 bits (56), Expect = 0.78
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -3
Query: 187 WNMLGICKRVENCRTADKDIDSPTCCLVTHP*SRTRIDITETLYTLFTT 41
WN L ++EN T D+ I S C + ++ TL +F+T
Sbjct: 424 WNALHSTTKIENEYTFDESISSSIVCTLRAAYDPPKVRTRSTLGKVFST 472
>SPBC26H8.04c |||DEP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1496
Score = 26.6 bits (56), Expect = 0.78
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 167 AYSQHVPLISQAPSSVRTHNSPQYYSNSLPAS 262
A+SQ P+ ++ P + NSP+Y +P S
Sbjct: 718 AFSQAPPIATKKPPTFLKPNSPEYAKTVIPKS 749
>SPCC584.15c |||arrestin/PY protein 2|Schizosaccharomyces pombe|chr
3|||Manual
Length = 594
Score = 26.6 bits (56), Expect = 0.78
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 170 YSQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQ 274
+S VP+ Q PSS ++++ ++ S P S S+
Sbjct: 397 HSNPVPISGQQPSSPASNSNANFFFGSSPQSMSSE 431
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 24.6 bits (51), Expect = 3.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 125 VDVLISSSTVLHTFAYSQHVPLISQ 199
V V+ + +HTF+ S+ VPL+S+
Sbjct: 187 VPVMSTEQPRMHTFSLSELVPLLSE 211
>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 24.6 bits (51), Expect = 3.1
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 160 VENCRTADKDIDSPT 116
VE C T D+DID+ T
Sbjct: 133 VETCETVDEDIDTQT 147
>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 317
Score = 24.6 bits (51), Expect = 3.1
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +2
Query: 161 TFAYSQHVPLISQAPSSVRTHNSPQYY---SNSLPASQES 271
+ +YS + S APS + T S Y+ S+S P+S S
Sbjct: 120 SLSYSGTISSTSIAPSMIGTRTSSSYFITSSSSTPSSSSS 159
>SPBP16F5.03c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3699
Score = 24.2 bits (50), Expect = 4.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -3
Query: 130 IDSPTCCLVTHP*SRTRIDITETLYTLFTTRYLVSSSLVKALV 2
ID+ T CL P + +D+T+ LY LF ++ + +ALV
Sbjct: 1316 IDAITYCLHRSP---SFLDLTDELYRLFRETIALADAEDEALV 1355
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 24.2 bits (50), Expect = 4.2
Identities = 7/24 (29%), Positives = 17/24 (70%)
Frame = +2
Query: 77 DSGTRLRMCNQAAGWAVDVLISSS 148
DSG L++C++ W+++ +++ S
Sbjct: 774 DSGFSLKLCSEVQEWSLNKVLNGS 797
>SPCC757.03c |||ThiJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 244
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = +1
Query: 79 FWYEIKDV*PGSRLGCRCPYQQFDSSPHVCIF 174
FWY +KD+ P ++ + F + H +F
Sbjct: 82 FWYALKDIKPADKINYKEFCIMFIAGGHAAMF 113
>SPAC23A1.03 |apt1||adenine phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 188
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -2
Query: 128 RQPNLLPGYTSLISYQNRY 72
R+PN LPG ++SY Y
Sbjct: 86 RKPNKLPGDLVVVSYNKEY 104
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +3
Query: 126 SMSLSAVRQFSTRLHIPNMFHLYHRHPAVSERITVRNITATPCQR 260
S S R S++L+ P+ YH H ++ E ++V + A+P R
Sbjct: 40 SADSSRRRSTSSQLNQPSN---YHMHSSLHEEVSVGSSIASPSSR 81
>SPAC11E3.01c |swr1|SPAC2H10.03c|SNF2 family helicase
Swr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1288
Score = 24.2 bits (50), Expect = 4.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -1
Query: 183 TCWEYANVWRTVELLIRTSTAQPAA 109
T WE W+ +E +R A+ AA
Sbjct: 179 TAWEIRKKWKVIEREVRRRRAERAA 203
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +2
Query: 194 SQAPSSVRTHNSPQYYSNSLPASQE 268
+Q+ SS + NSP N+LPAS +
Sbjct: 792 NQSVSSTQGSNSPLELINNLPASDD 816
>SPAC959.02 |sec17||alpha SNAP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 289
Score = 23.8 bits (49), Expect = 5.5
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 207 LGACDISGTCWEYANVWRTVELLIRTS 127
L A D++G C EY+ R E + R S
Sbjct: 159 LKAADLAGLCGEYSLAIRKFEQVARAS 185
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 23.8 bits (49), Expect = 5.5
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 181 MLGICKRVENCRTADKD 131
+LG CK++EN T DK+
Sbjct: 1061 LLGECKQLENSITKDKE 1077
>SPBC685.03 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 452
Score = 23.4 bits (48), Expect = 7.3
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +2
Query: 71 DIDSGTRLRMCNQAAGWAVDVLISSSTVLHTFAYSQHVPLISQAPSSVRTHNSPQYYSNS 250
D+ G + N G+A + SSS T + V S P++ T++S + S++
Sbjct: 109 DVSFGVFSSLANSVTGYASNYTQSSSNSTSTMNSTGSVSGGSVYPTNSTTNSSISWNSST 168
Query: 251 LPASQES 271
A+ S
Sbjct: 169 SAATNTS 175
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 23.4 bits (48), Expect = 7.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 157 PHVCIFPTCS 186
PHVC FP C+
Sbjct: 53 PHVCTFPGCA 62
>SPBC4B4.04 |||translation initiation factor eIF2A
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 576
Score = 23.4 bits (48), Expect = 7.3
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 167 AYSQHVPLISQAPSSVRTHNSPQYYSNSLPASQES 271
A + +P AP+SVRT++ P + S P SQ++
Sbjct: 180 AVAVFIPEKKGAPASVRTYSIPNFNS---PLSQKT 211
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 23.4 bits (48), Expect = 7.3
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -2
Query: 296 RISALGLLGFPVTLARSCCNIADC 225
RI+A L P CC++ DC
Sbjct: 730 RITAQEALNLPFVQEIECCSVDDC 753
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 23.0 bits (47), Expect = 9.6
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Frame = +2
Query: 122 AVDVLISSSTVLHTFA-----YSQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQE 286
A D ++SS + H+FA + Q + S+APS T +S + + ++PA+ Q
Sbjct: 215 ANDTTVNSS-LPHSFASPSSTFEQPHTVQSRAPSVDTTSSSHSFSARNIPANVSMQQQMG 273
Query: 287 RK 292
R+
Sbjct: 274 RR 275
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +2
Query: 140 SSSTVLHTFAYSQHVPLISQAPSSVRTHNSPQYYSNSLPASQESQVAQ 283
S S +T +QH+P +S +PS+ S +P + + AQ
Sbjct: 387 SPSVDPNTVKSAQHIPRMSPSPSASALKTQSHVPSAKVPPTSKLNHAQ 434
>SPAC6B12.11 |drc1|sld1|DNA replication protein
Drc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 337
Score = 23.0 bits (47), Expect = 9.6
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 173 SQHVPLISQAPSSVR--THNSPQYYSNSLPASQE-SQVAQERK 292
+QH P + + PSS R + SP + P + S++ +E K
Sbjct: 163 AQHTPTVLETPSSYRLQVYTSPNLLRVNAPCRKSLSEMLRELK 205
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/22 (36%), Positives = 11/22 (50%)
Frame = -1
Query: 192 ISGTCWEYANVWRTVELLIRTS 127
I G W +A WR +L+ S
Sbjct: 910 IIGIAWSFATGWRLAAVLVAVS 931
>SPAC31G5.05c |||ribulose phosphate 3-epimerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 228
Score = 23.0 bits (47), Expect = 9.6
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = +2
Query: 71 DIDSGTRLRMCNQAAGWAVDVLISSSTVLH 160
++D G L+ + AA +V+++ + V H
Sbjct: 173 EVDGGLSLKTVDAAADAGANVIVAGTAVFH 202
>SPBC3B9.15c |scp1||sterol regulatory element binding protein
Scp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1086
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 105 LHILNLVPESISLKHCTHCLPRGIL 31
L ILN+ + L+H HC P L
Sbjct: 662 LFILNVESPCLMLQHSYHCKPNSKL 686
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,329,728
Number of Sequences: 5004
Number of extensions: 26059
Number of successful extensions: 85
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 73700136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -