SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J18
         (300 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p pro...    29   1.4  
AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-P...    29   1.4  
AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-P...    29   1.4  
BT021954-1|AAX51659.1|  657|Drosophila melanogaster AT15161p pro...    27   3.3  
AE014296-3526|AAF51715.2|  650|Drosophila melanogaster CG32437-P...    27   3.3  
BT025127-1|ABE73298.1|  331|Drosophila melanogaster IP08092p pro...    27   5.8  
AY071420-1|AAL49042.1|  302|Drosophila melanogaster RE50009p pro...    26   7.7  
AY058753-1|AAL13982.1| 1170|Drosophila melanogaster SD01586p pro...    26   7.7  
AE014297-279|AAF52006.1|  302|Drosophila melanogaster CG2931-PA ...    26   7.7  
AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA...    26   7.7  
AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.    26   7.7  

>AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p
           protein.
          Length = 948

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 177 WEYANVWRTVELLIRTSTAQPAAWLHILNL 88
           WE   VW   ELL  T + QP A  +I+ L
Sbjct: 177 WERRKVWNIDELLAETESIQPQAARNIVKL 206


>AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-PB,
           isoform B protein.
          Length = 993

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 177 WEYANVWRTVELLIRTSTAQPAAWLHILNL 88
           WE   VW   ELL  T + QP A  +I+ L
Sbjct: 177 WERRKVWNIDELLAETESIQPQAARNIVKL 206


>AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-PA,
           isoform A protein.
          Length = 948

 Score = 28.7 bits (61), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 177 WEYANVWRTVELLIRTSTAQPAAWLHILNL 88
           WE   VW   ELL  T + QP A  +I+ L
Sbjct: 177 WERRKVWNIDELLAETESIQPQAARNIVKL 206


>BT021954-1|AAX51659.1|  657|Drosophila melanogaster AT15161p
           protein.
          Length = 657

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 144 VRQFSTRLHIPNMFHLYHRHP 206
           V +  TRL + N+ H+YHR P
Sbjct: 195 VEEQMTRLELDNLEHMYHRSP 215


>AE014296-3526|AAF51715.2|  650|Drosophila melanogaster CG32437-PA
           protein.
          Length = 650

 Score = 27.5 bits (58), Expect = 3.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 144 VRQFSTRLHIPNMFHLYHRHP 206
           V +  TRL + N+ H+YHR P
Sbjct: 195 VEEQMTRLELDNLEHMYHRSP 215


>BT025127-1|ABE73298.1|  331|Drosophila melanogaster IP08092p
           protein.
          Length = 331

 Score = 26.6 bits (56), Expect = 5.8
 Identities = 18/61 (29%), Positives = 27/61 (44%)
 Frame = +2

Query: 41  RGKQCVQCFSDIDSGTRLRMCNQAAGWAVDVLISSSTVLHTFAYSQHVPLISQAPSSVRT 220
           R +  ++C S   +      C  AAG A D +ISS++     A       I QA   V++
Sbjct: 248 RPRSPLECASVFAAVAAAATCGDAAGGAADTVISSASGTSAVAIDNK---IEQAMDLVKS 304

Query: 221 H 223
           H
Sbjct: 305 H 305


>AY071420-1|AAL49042.1|  302|Drosophila melanogaster RE50009p
           protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 122 AVDVLISSSTVLHTFAYSQHVPLISQAPS 208
           A  V++SS+  L+    S HVP ++ APS
Sbjct: 92  ATPVVLSSAPKLYQCRQSVHVPTVAAAPS 120


>AY058753-1|AAL13982.1| 1170|Drosophila melanogaster SD01586p
           protein.
          Length = 1170

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = +3

Query: 168 HIPNMFHLYHR-HPAVSERITVRNITATPCQRHRK 269
           HIPNM H YH  H A            TP   H++
Sbjct: 861 HIPNMGHYYHHGHLAAMHAAAAAASGMTPTAAHQQ 895


>AE014297-279|AAF52006.1|  302|Drosophila melanogaster CG2931-PA
           protein.
          Length = 302

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +2

Query: 122 AVDVLISSSTVLHTFAYSQHVPLISQAPS 208
           A  V++SS+  L+    S HVP ++ APS
Sbjct: 92  ATPVVLSSAPKLYQCRQSVHVPTVAAAPS 120


>AE013599-3406|AAF46855.2| 1995|Drosophila melanogaster CG4444-PA
            protein.
          Length = 1995

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = +3

Query: 168  HIPNMFHLYHR-HPAVSERITVRNITATPCQRHRK 269
            HIPNM H YH  H A            TP   H++
Sbjct: 1686 HIPNMGHYYHHGHLAAMHAAAAAASGMTPTAAHQQ 1720


>AB032181-1|BAA86717.1| 1990|Drosophila melanogaster plexus protein.
          Length = 1990

 Score = 26.2 bits (55), Expect = 7.7
 Identities = 13/35 (37%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
 Frame = +3

Query: 168  HIPNMFHLYHR-HPAVSERITVRNITATPCQRHRK 269
            HIPNM H YH  H A            TP   H++
Sbjct: 1681 HIPNMGHYYHHGHLAAMHAAAAAASGMTPTAAHQQ 1715


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,626,321
Number of Sequences: 53049
Number of extensions: 302143
Number of successful extensions: 736
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 24,988,368
effective HSP length: 73
effective length of database: 21,115,791
effective search space used: 549010566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -