Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J17
(564 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 59 3e-11
L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein pro... 33 0.002
AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 31 0.008
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 31 0.011
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 29 0.043
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 29 0.043
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 25 0.53
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 25 0.53
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.92
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 0.92
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.9
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 8.6
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 8.6
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 59.3 bits (137), Expect = 3e-11
Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 16/170 (9%)
Frame = +2
Query: 101 LKKEGYECT-CGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALH-RRRV 274
++++ Y+C C F +++ ++ L+SH + Y C C + F L H R
Sbjct: 57 IEEKTYQCLLCQKAFDQKNLYQSHLRSHGKEGEDP-YRCNICGKTFAVPARLTRHYRTHT 115
Query: 275 HRKRFPCKFCPTDYNTRKELFKHLQIHQKVQLMEYKVISEVVKGRQKL------------ 418
K + C++C ++ ++ L H +IH K + + V + KL
Sbjct: 116 GEKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTGERP 175
Query: 419 -KCFMCSKTYSELSELKSHVMDDHNE-PYSCLRCKQTFSKIIDFGNHTKT 562
KC +CSKT+ + +L H+ E PY C C + F+ HT+T
Sbjct: 176 HKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKACGKGFTCSKQLKVHTRT 225
>L01589-1|AAA27736.1| 81|Apis mellifera zinc finger protein
protein.
Length = 81
Score = 33.5 bits (73), Expect = 0.002
Identities = 16/54 (29%), Positives = 23/54 (42%)
Frame = +2
Query: 401 KGRQKLKCFMCSKTYSELSELKSHVMDDHNEPYSCLRCKQTFSKIIDFGNHTKT 562
+ ++ C C K Y L LK H+ H P C C + FS+ H +T
Sbjct: 12 QAKKSFSCKYCEKVYVSLGALKMHIR-THTLPCKCHLCGKAFSRPWLLQGHIRT 64
Score = 33.1 bits (72), Expect = 0.002
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 1/85 (1%)
Frame = +2
Query: 278 RKRFPCKFCPTDYNTRKELFKHLQIHQKVQLMEYKVISEVVKGRQKLKCFMCSKTYSELS 457
+K F CK+C Y + L H++ H KC +C K +S
Sbjct: 14 KKSFSCKYCEKVYVSLGALKMHIRTH-----------------TLPCKCHLCGKAFSRPW 56
Query: 458 ELKSHVMDDHNE-PYSCLRCKQTFS 529
L+ H+ E P+SC C + F+
Sbjct: 57 LLQGHIRTHTGEKPFSCQHCNRAFA 81
>AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc
finger domain-Z2 isoform protein.
Length = 71
Score = 31.1 bits (67), Expect = 0.008
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 422 CFMCSKTYSELSELKSHVMDDH---NEPYSCLRCKQTF 526
C +C K + LK HV D H E Y C+ C++ +
Sbjct: 8 CQLCGKVLCSKASLKRHVADKHAERQEEYRCVICERVY 45
Score = 24.6 bits (51), Expect = 0.70
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +2
Query: 107 KEGYECT-CGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALHRRRVHRK 283
K+ + C CG V ++ ++ + + + Y C+ C R + S+ L H H+
Sbjct: 3 KKLFTCQLCGKVLCSKASLKRHVADKHA-ERQEEYRCVICERVYCSRNSLMTHIYTYHKS 61
Query: 284 R 286
R
Sbjct: 62 R 62
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 30.7 bits (66), Expect = 0.011
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
Frame = +2
Query: 422 CFMCSKTYSELSELKSHVMDDHNEPYS---CLRCKQTFSKIIDFGNH 553
C +C KT S LK H H +P + C C + F + NH
Sbjct: 374 CDVCGKTLSTKLTLKRHKEQQHFQPLNSAVCALCHKVFRTLNSLNNH 420
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 28.7 bits (61), Expect = 0.043
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = +2
Query: 206 YPCMTCPRHFKSKEDLALHRR-RVHRKRFPCKFCPTDYNTRKELFKHLQIH 355
+ C C + F L H R K + C C + L +HL++H
Sbjct: 10 FECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVH 60
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 28.7 bits (61), Expect = 0.043
Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Frame = +2
Query: 212 CMTCPRHFKSKEDLALHRRRVHRKR---FPCKFCPTDYNTRKELFKHLQIHQK 361
C C R+F L H + H + + C+FC Y T+ L H + +
Sbjct: 8 CPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRYRTKNSLTTHKSLQHR 60
Score = 26.2 bits (55), Expect = 0.23
Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 1/58 (1%)
Frame = +2
Query: 110 EGYECT-CGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKEDLALHRRRVHR 280
E EC C F ++ + + DT Y C C R +++K L H+ HR
Sbjct: 4 EPQECPYCRRNFSCYYSLKRHFQDKHEQSDTL-YVCEFCNRRYRTKNSLTTHKSLQHR 60
Score = 23.8 bits (49), Expect = 1.2
Identities = 11/39 (28%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = +2
Query: 419 KCFMCSKTYSELSELKSHVMDDHNEP---YSCLRCKQTF 526
+C C + +S LK H D H + Y C C + +
Sbjct: 7 ECPYCRRNFSCYYSLKRHFQDKHEQSDTLYVCEFCNRRY 45
Score = 21.8 bits (44), Expect = 4.9
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +2
Query: 488 NEPYSCLRCKQTFSKIIDFGNH 553
NEP C C++ FS H
Sbjct: 3 NEPQECPYCRRNFSCYYSLKRH 24
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 25.0 bits (52), Expect = 0.53
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +2
Query: 404 GRQKLKCFMCSKTYSELSELKSHVMDDHN-EPYSCLRC 514
G + KC CS + S L SH+ N Y C C
Sbjct: 13 GSKPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANC 50
Score = 21.8 bits (44), Expect = 4.9
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 242 KEDLALH-RRRVHRKRFPCKFCPTDYNTRKELFKHLQIHQKV 364
K L H R K F C+ C + L HL+ H V
Sbjct: 1 KHHLEYHLRNHFGSKPFKCEKCSYSCVNKSMLNSHLKSHSNV 42
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 25.0 bits (52), Expect = 0.53
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +2
Query: 380 KVISEVVKGRQKLKCFMCSKTYSELSELKSHVMDDHNEPY-SCLRCKQTFSK 532
K++ EV+K RQK + + +K + ++ K ++ H Y L+ K+ F K
Sbjct: 403 KILQEVIKFRQKQRAEILAKEHKAAADQK---LEKHLIEYKKMLKIKRLFGK 451
Score = 22.2 bits (45), Expect = 3.7
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -1
Query: 261 CNAKSSLLLKC-LGHVMHG*DAVSSYMLCDFRHV 163
C +LLK L HV+ G + + S L RH+
Sbjct: 609 CRCVKGILLKSGLYHVLRGNENIYSGKLISMRHL 642
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 0.92
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 74 EEIKAKVEPLKKEGYECTCGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKED 250
EEI + + GY TC N +RS + ++ N +++ Y C P F S +
Sbjct: 3 EEISTENAKVSDSGYSNTCSNSQSQRSSGSSISRNSNR-SESSGY-CGRRPSTFGSSNE 59
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.2 bits (50), Expect = 0.92
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = +2
Query: 74 EEIKAKVEPLKKEGYECTCGNVFRRRSRMETCLKSHNMYDDTASYPCMTCPRHFKSKED 250
EEI + + GY TC N +RS + ++ N +++ Y C P F S +
Sbjct: 3 EEISTENAKVSDSGYSNTCSNSQSQRSSGSSISRNSNR-SESSGY-CGRRPSTFGSSNE 59
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.9
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2
Query: 470 HVMDDHNEPYSCL 508
H+ DHN YSC+
Sbjct: 674 HLSPDHNGNYSCV 686
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.0 bits (42), Expect = 8.6
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +2
Query: 71 DEEIKAKVEPLKKEGYECT 127
D+E+K +V+ + EG++ T
Sbjct: 335 DKEVKEQVDTIMFEGHDTT 353
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.0 bits (42), Expect = 8.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 458 ELKSHVMDDHNEPYSCLRCKQTFS 529
E+K D P + L CK+TFS
Sbjct: 89 EIKFTTRDCSLFPGNALSCKETFS 112
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = -1
Query: 462 NSESSL*VFEHIKHFNFCLPLTTSEI 385
+S S + + E +KHF +TTS++
Sbjct: 252 SSTSRIVISESLKHFTIQSSVTTSKM 277
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,056
Number of Sequences: 438
Number of extensions: 3295
Number of successful extensions: 30
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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