Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J16
(629 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 109 2e-24
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 109 2e-24
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 96 2e-20
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 96 2e-20
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 68 6e-12
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 68 6e-12
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 68 6e-12
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 62 4e-10
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 62 4e-10
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 58 4e-09
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 58 4e-09
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 58 4e-09
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 50 2e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 49 2e-06
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 48 7e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 47 1e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 7e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 7e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 9e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 9e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 9e-05
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 41 8e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 41 8e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 39 0.003
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 38 0.006
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 38 0.008
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 37 0.010
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 37 0.014
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 36 0.018
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 36 0.018
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 36 0.018
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 36 0.018
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 36 0.018
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 36 0.018
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 36 0.018
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.024
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 36 0.024
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 36 0.032
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 36 0.032
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 35 0.042
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 35 0.042
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 34 0.073
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 34 0.073
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 34 0.073
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 34 0.096
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 34 0.096
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 34 0.096
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 34 0.096
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.13
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 33 0.22
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 33 0.22
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 33 0.22
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 33 0.22
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.29
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 32 0.29
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 32 0.29
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 32 0.29
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 32 0.39
Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical p... 32 0.39
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.90
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 31 0.90
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 31 0.90
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 31 0.90
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 30 1.6
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 29 2.7
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 29 3.6
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 29 3.6
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical pr... 27 8.4
AL031633-3|CAD56609.1| 545|Caenorhabditis elegans Hypothetical ... 27 8.4
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 109 bits (262), Expect = 2e-24
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 28/202 (13%)
Frame = +1
Query: 106 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY--VFKAP 279
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ Y V +A
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 280 DSIDKV---------------------MAAGEHTINSKKVDPKKAKARHGK-IFVGGLSS 393
D+ +AA E TI K V+ K AK+R K +FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 394 EISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNE 573
+ S+ ++++ F G + ++E PFDK R+ F FI FE E+ ++ KQT G E
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRE 179
Query: 574 VDVKRATPK----PDGPGGMSG 627
DVK+A P+ P G M G
Sbjct: 180 CDVKKAVPQGKRFPGAQGRMPG 201
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 109 bits (262), Expect = 2e-24
Identities = 70/202 (34%), Positives = 106/202 (52%), Gaps = 28/202 (13%)
Frame = +1
Query: 106 TDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY--VFKAP 279
TDN++NGN+ ++N G ++D+K+FVGG+S E ++++L HF+ Y V +A
Sbjct: 4 TDNKINGNASE---TIKENGHSTKG-NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQ 59
Query: 280 DSIDKV---------------------MAAGEHTINSKKVDPKKAKARHGK-IFVGGLSS 393
D+ +AA E TI K V+ K AK+R K +FVGGL S
Sbjct: 60 VKYDRTNGRSRGFAFVEFTTGEGCKLALAAREQTIKGKSVEVKPAKSRENKKVFVGGLPS 119
Query: 394 EISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNE 573
+ S+ ++++ F G + ++E PFDK R+ F FI FE E+ ++ KQT G E
Sbjct: 120 DYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASSQTKQTFGTRE 179
Query: 574 VDVKRATPK----PDGPGGMSG 627
DVK+A P+ P G M G
Sbjct: 180 CDVKKAVPQGKRFPGAQGRMPG 201
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 32/180 (17%)
Frame = +1
Query: 157 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY-----------------------V 267
D+ + G D K+F+GGLSW+T+ + LRD+F +
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 268 FKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKN 420
F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+ + +++K
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 421 FFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKRATPK 600
+F G + + + FDK + +GF F+TF+S++V +++ + I G V+ K+A PK
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/97 (28%), Positives = 50/97 (51%)
Frame = +1
Query: 310 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRK 489
E +N+ D GK+F+GGLS + + + ++++F G + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 490 GFCFITFESEQVVNELLKTPKQTIGGNEVDVKRATPK 600
GF FITF V+++L + + G ++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/180 (30%), Positives = 93/180 (51%), Gaps = 32/180 (17%)
Frame = +1
Query: 157 DNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY-----------------------V 267
D+ + G D K+F+GGLSW+T+ + LRD+F +
Sbjct: 33 DSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFIT 92
Query: 268 FKAPDSIDKVMAAGEHTINSKKVDPK---------KAKARHGKIFVGGLSSEISDDEIKN 420
F P S+DKV+ EH ++ KK+DPK K + K+F+GGLS+ + +++K
Sbjct: 93 FVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQ 152
Query: 421 FFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKRATPK 600
+F G + + + FDK + +GF F+TF+S++V +++ + I G V+ K+A PK
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 57.6 bits (133), Expect = 7e-09
Identities = 28/97 (28%), Positives = 50/97 (51%)
Frame = +1
Query: 310 EHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRK 489
E +N+ D GK+F+GGLS + + + ++++F G + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 490 GFCFITFESEQVVNELLKTPKQTIGGNEVDVKRATPK 600
GF FITF V+++L + + G ++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
KIFVGGL+S +DD ++ F+S G I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 547 PKQTIGGNEVDVKRATPKPD 606
I G VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 63.3 bits (147), Expect = 1e-10
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Frame = +1
Query: 130 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY--------------- 264
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 265 --------VFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 387
F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 388 SSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 567
+ ++D + +F+ G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Query: 568 NEVDVKRATPKPD 606
+ DV++ K +
Sbjct: 182 HRCDVRKGLSKDE 194
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
KIFVGGL+S +DD ++ F+S G I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 547 PKQTIGGNEVDVKRATPKPD 606
I G VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 63.3 bits (147), Expect = 1e-10
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Frame = +1
Query: 130 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY--------------- 264
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 265 --------VFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 387
F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 388 SSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 567
+ ++D + +F+ G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Query: 568 NEVDVKRATPKPD 606
+ DV++ K +
Sbjct: 182 HRCDVRKGLSKDE 194
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/80 (40%), Positives = 47/80 (58%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
KIFVGGL+S +DD ++ F+S G I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 547 PKQTIGGNEVDVKRATPKPD 606
I G VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 63.3 bits (147), Expect = 1e-10
Identities = 48/193 (24%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Frame = +1
Query: 130 SEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY--------------- 264
+E+G GD S E ++ RK+FVGGL+ T+D +R+ +S +
Sbjct: 8 AENGSGDA---SLEP---ENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTK 61
Query: 265 --------VFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGL 387
F +D M H I+ K VDPK+A R K ++V G+
Sbjct: 62 RSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGV 121
Query: 388 SSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGG 567
+ ++D + +F+ G + + E+ DK + +GF F+TF+ V++ + + G
Sbjct: 122 REDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNG 181
Query: 568 NEVDVKRATPKPD 606
+ DV++ K +
Sbjct: 182 HRCDVRKGLSKDE 194
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +1
Query: 253 FSAYVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGLSSEI 399
F F +D M H I+ K VDPK+A R K ++V G+ +
Sbjct: 28 FGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDH 87
Query: 400 SDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVD 579
++D + +F+ G + + E+ DK + +GF F+TF+ V++ + + G+ D
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 580 VKRATPKPD 606
V++ K +
Sbjct: 148 VRKGLSKDE 156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 412 IKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKRA 591
++ F+S G I ++ + D T + +GF F+TF + V+ +K I G VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 592 TPKPD 606
P+ D
Sbjct: 61 VPRDD 65
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 61.7 bits (143), Expect = 4e-10
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 11/129 (8%)
Frame = +1
Query: 253 FSAYVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGK-----------IFVGGLSSEI 399
F F +D M H I+ K VDPK+A R K ++V G+ +
Sbjct: 28 FGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDH 87
Query: 400 SDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVD 579
++D + +F+ G + + E+ DK + +GF F+TF+ V++ + + G+ D
Sbjct: 88 TEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCD 147
Query: 580 VKRATPKPD 606
V++ K +
Sbjct: 148 VRKGLSKDE 156
Score = 48.0 bits (109), Expect = 6e-06
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +1
Query: 412 IKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKRA 591
++ F+S G I ++ + D T + +GF F+TF + V+ +K I G VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 592 TPKPD 606
P+ D
Sbjct: 61 VPRDD 65
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
K+F+GGLS + +D+++ N+FS G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 547 PKQTIGGNEVDVKRATPK 600
+GG VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
Score = 34.3 bits (75), Expect = 0.073
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 44/183 (24%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFS-------AYVFKAPD----------------SIDKVMA 303
RKLF+GGLS +T+D++L ++FS A V + P+ S + M
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 108
Query: 304 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 426
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 109 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 168
Query: 427 SNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL--KTPKQTIGGNEVDVKRATPK 600
G + +VE+ Q +G F+ +E ++ + L + + + +++V+ T
Sbjct: 169 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 223
Query: 601 PDG 609
P+G
Sbjct: 224 PNG 226
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
K+F+GGLS + +D+++ N+FS G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 547 PKQTIGGNEVDVKRATPK 600
+GG VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
Score = 34.3 bits (75), Expect = 0.073
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 44/183 (24%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFS-------AYVFKAPD----------------SIDKVMA 303
RKLF+GGLS +T+D++L ++FS A V + P+ S + M
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 128
Query: 304 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 426
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 129 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 188
Query: 427 SNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL--KTPKQTIGGNEVDVKRATPK 600
G + +VE+ Q +G F+ +E ++ + L + + + +++V+ T
Sbjct: 189 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 243
Query: 601 PDG 609
P+G
Sbjct: 244 PNG 246
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 58.4 bits (135), Expect = 4e-09
Identities = 26/78 (33%), Positives = 43/78 (55%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
K+F+GGLS + +D+++ N+FS G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 547 PKQTIGGNEVDVKRATPK 600
+GG VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
Score = 34.3 bits (75), Expect = 0.073
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 44/183 (24%)
Frame = +1
Query: 193 RKLFVGGLSWETSDKELRDHFS-------AYVFKAPD----------------SIDKVMA 303
RKLF+GGLS +T+D++L ++FS A V + P+ S + M
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMN 129
Query: 304 AGEHTINSKKVDPKKAKARHG------------------KIFVGGLSSEI-SDDEIKNFF 426
H + K VD K+A R K+ + G+++ + S D ++ +F
Sbjct: 130 DRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSVDSLRVYF 189
Query: 427 SNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL--KTPKQTIGGNEVDVKRATPK 600
G + +VE+ Q +G F+ +E ++ + L + + + +++V+ T
Sbjct: 190 ETFGTLDQVEI-----LGQPRGLGFVIYEDKESADRCLAHNSGRHIVNERKIEVRVFTKH 244
Query: 601 PDG 609
P+G
Sbjct: 245 PNG 247
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 54.4 bits (125), Expect = 6e-08
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETSDKELRDHFSAYVFKAPDSIDKVMAAGEHTINSKKVDPKKAKA 357
G D+ R L+VG L D + + F A +F S+ K + + V+P + ++
Sbjct: 41 GSDEPRTLYVGNL-----DSTVTEDFIATLFNQIGSVTKTKVIFDEMKVNWAVEPGQQQS 95
Query: 358 -----RHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESE 519
RH +FVG LSSE+ + +++ F G++ + ++ D + KG+ F+++ + E
Sbjct: 96 KIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKRE 155
Query: 520 QVVNELLKTPKQTIGGNEVDVKRATPKP 603
+ + + Q +G + AT KP
Sbjct: 156 EAERAIEQMNGQWLGRRTIRTNWATRKP 183
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 49.6 bits (113), Expect = 2e-06
Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 8/114 (7%)
Frame = +1
Query: 214 LSWETSDKELRDHFSAYV-FKAPDSIDKVMAAG-----EHTINSKKVDPKKAK-ARHGKI 372
L+ + +DK+ + YV F A +S++K + +H I KV KK + + I
Sbjct: 191 LTGKLNDKQ--SSLTFYVKFGAEESVEKALKYNGTKLDDHVIRVDKVGSKKKEFGKDMAI 248
Query: 373 FVGGLSSEISDDEIKNFFS-NVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVN 531
FVG L EI++D + FFS +G + V + DK + KGF F+ F+ + V+
Sbjct: 249 FVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVS 302
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK 543
+FVG +S ++S+D I++ FS GN++ ++M D+ + KG+ FI F Q ++
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +1
Query: 343 KKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESE 519
K +RH +FVG L SEI +++ F G + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 520 QVVNELLKTPKQTIGGNEVDVKRATPKPDGPGGMSG 627
+ + +G + AT KPD G G
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPDEDGERGG 220
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/75 (30%), Positives = 35/75 (46%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
KIFVGGL SD + +F G+I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 547 PKQTIGGNEVDVKRA 591
P I G + +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
Score = 31.9 bits (69), Expect = 0.39
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAY 264
K+FVGGL + TSDK L ++F +
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQF 58
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/70 (25%), Positives = 42/70 (60%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKG 492
H+ + ++ + ++H +FVG LS ++S++ +K+ F+ G + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 493 FCFITFESEQ 522
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
Score = 32.3 bits (70), Expect = 0.29
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = +1
Query: 187 DDRKLFVGGLSWETSDKELRDHFSAYVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHG 366
D+ ++VG +S +T+D +LRD FS Y A I K K+ K +G
Sbjct: 235 DNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEMNG 294
Query: 367 KIFVG 381
K G
Sbjct: 295 KEMAG 299
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.8 bits (101), Expect = 5e-05
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 376 VGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
V L E+++DE+++ F +G +I + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 358 RHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 534
RH +FVG LSSE+ + +++ F G++ + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 535 LLKTPKQTIGGNEVDVKRATPKP 603
+ + Q +G + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 358 RHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 534
RH +FVG LSSE+ + +++ F G++ + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 535 LLKTPKQTIGGNEVDVKRATPKP 603
+ + Q +G + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 44.8 bits (101), Expect = 5e-05
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Frame = +1
Query: 358 RHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNE 534
RH +FVG LSSE+ + +++ F G++ + ++ D + KG+ F+++ + E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 535 LLKTPKQTIGGNEVDVKRATPKP 603
+ + Q +G + AT KP
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKP 215
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 543
+IFVGG + ++ E++ F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 544 TPKQ 555
TPKQ
Sbjct: 126 TPKQ 129
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAY 264
++FVGG T++ ELR+HF +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKF 89
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.4 bits (100), Expect = 7e-05
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLK- 543
+IFVGG + ++ E++ F + +V+M Q KG+ FITFE+E E+ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 544 TPKQ 555
TPKQ
Sbjct: 127 TPKQ 130
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = +1
Query: 196 KLFVGGLSWETSDKELRDHFSAY 264
++FVGG T++ ELR+HF +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKF 90
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 337 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
DP ++ G IF+ L I + I + FS GNI+ ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 517 EQVV-NELLKTPKQTIGGNEVDVKRATPK 600
E+ N + K + G +V V + P+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 34.7 bits (76), Expect = 0.055
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQ 522
++V L + DD +K F + GNI ++ D+ + KGF F+ FE +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPE 368
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 337 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
DP ++ G IF+ L I + I + FS GNI+ ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 517 EQVV-NELLKTPKQTIGGNEVDVKRATPK 600
E+ N + K + G +V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 546
++V L + DD +K F + GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 314
Query: 547 PKQTIGGNEVDVKRATPKPD 606
+ + + V A K D
Sbjct: 315 NSKMVCSKPLYVAIAQRKED 334
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 44.0 bits (99), Expect = 9e-05
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 337 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
DP ++ G IF+ L I + I + FS GNI+ ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 517 EQVV-NELLKTPKQTIGGNEVDVKRATPK 600
E+ N + K + G +V V + P+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 546
++V L + DD +K F + GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 377
Query: 547 PKQTIGGNEVDVKRATPKPD 606
+ + + V A K D
Sbjct: 378 NSKMVCSKPLYVAIAQRKED 397
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/94 (24%), Positives = 44/94 (46%)
Frame = +1
Query: 316 TINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGF 495
T N K+ + K +++ + +++++F G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 496 CFITFESEQVVNELLKTPKQTIGGNEVDVKRATP 597
ITF+S+ N+ ++ I G+ VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 42.3 bits (95), Expect = 3e-04
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESE 519
++VG + +++E+ NFFS++G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.9 bits (94), Expect = 4e-04
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESE 519
++VG + ++D++ N+FS GN+ V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.5 bits (93), Expect = 5e-04
Identities = 15/50 (30%), Positives = 32/50 (64%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESE 519
++VG + + +++EI N+F+ VG++ V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 41.5 bits (93), Expect = 5e-04
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Frame = +1
Query: 343 KKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESE 519
+KA+A ++VG + + +EI+ F G++ V + D+ KGF ++ F E E
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 520 QVVNELLKTPKQTIGGN-EVDVKRATPKP 603
+ N L T G +VD KR T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKR-TNKP 158
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Frame = +1
Query: 289 DKVMAAGEHTINSKKVDPKKAKARH-------GKIFVGGLSSEISDDEIKNFFSNVG-NI 444
+KV+A +H I+ ++ D K R +IFVG L+ ++ + +++ F + +
Sbjct: 227 NKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSY 286
Query: 445 IEVEMPFDK-TKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKRATPKPD 606
IE + D +GF F+T S + ++ T+ G V + A P+ +
Sbjct: 287 IETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 549
+ V G+ + +D+ + +F ++G ++ E+ K+ KGF F+ S N++L P
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 550 KQTIGGNEVDVK 585
+ I G DVK
Sbjct: 234 QHMIDGRRCDVK 245
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQ 522
+++ GL +DD ++ S GNI + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 40.7 bits (91), Expect = 8e-04
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQ 522
+++ GL +DD ++ S GNI + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 337 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
DP +A +G IF+ L I + + + FS GNI+ ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 517 E 519
E
Sbjct: 195 E 195
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 40.7 bits (91), Expect = 8e-04
Identities = 21/61 (34%), Positives = 33/61 (54%)
Frame = +1
Query: 337 DPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
DP +A +G IF+ L I + + + FS GNI+ ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 517 E 519
E
Sbjct: 195 E 195
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 549
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 550 KQ-TIGGNEVDVKRAT 594
+ G + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 549
I+VGGL ++S+ + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 550 KQ-TIGGNEVDVKRAT 594
+ G + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 15/51 (29%), Positives = 31/51 (60%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQ 522
I++GGLS +S+ ++ FS G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTP 549
+FV + E ++D++ + FS G I + + D+ KG+ + +E+++ NE +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 550 KQT 558
T
Sbjct: 117 NDT 119
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.9 bits (84), Expect = 0.006
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQ 522
++VG LS +D++ F G++ V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 37.5 bits (83), Expect = 0.008
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 358 RHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFE-SEQVVNE 534
R ++VGG + ++++ + F G+++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 535 LLKTPKQTIGGNEVDVKRATP 597
+ + + G + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 37.1 bits (82), Expect = 0.010
Identities = 17/79 (21%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF-ESEQVVNELLK 543
++F G L +E+SD+ + F + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 544 TPKQTIGGNEVDVKRATPK 600
+ +G + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 36.7 bits (81), Expect = 0.014
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
K+FV + + +DDE+K FS G + V K + KG F+ F++E + + +
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVAS 742
Query: 547 -PKQTIGGNEVDVKRATP 597
K + E++V + P
Sbjct: 743 GDKLMLRERELEVALSNP 760
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = +1
Query: 172 APGRDDDRKLFVGGLSWETSDKELR 246
APG +D R +FV L + T++ E+R
Sbjct: 586 APGTEDARTIFVSNLDFTTTEDEIR 610
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 36.3 bits (80), Expect = 0.018
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
K+FVG + + ++ + + F G++ + DK+ KG CF+TF
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
+I++G L+S +S+ +I++FF G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 547 PK-QTIGGNEVDVKRATPKPDGPGGMSG 627
+ +GG V + + KP G GG G
Sbjct: 56 LNGKELGGERVILDYS--KPRGGGGDRG 81
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
+I++G L+S +S+ +I++FF G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 547 PK-QTIGGNEVDVKRATPKPDGPGGMSG 627
+ +GG V + + KP G GG G
Sbjct: 56 LNGKELGGERVILDYS--KPRGGGGDRG 81
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKT 546
+I++G L+S +S+ +I++FF G I +V + + GF F+ F+ ++ + +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 547 PK-QTIGGNEVDVKRATPKPDGPGGMSG 627
+ +GG V + + KP G GG G
Sbjct: 56 LNGKELGGERVILDYS--KPRGGGGDRG 81
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 35.9 bits (79), Expect = 0.024
Identities = 24/79 (30%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 546
+FV LSS+ D + FS G I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 547 PKQTIGGNEVDV--KRATP 597
+ G + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 35.9 bits (79), Expect = 0.024
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +1
Query: 160 NSAEAPGRDDD--RKLFVGGLSWETSDKELRDHFSAY 264
N AE P +D R LFVG +++ETS+ +LR F AY
Sbjct: 91 NPAENPRASEDPYRTLFVGRINYETSESKLRREFEAY 127
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.032
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 232 DKELRDHFSAYVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDE 411
D +R + + K +++ M +S+ PK K K+F+G LS + S+DE
Sbjct: 81 DSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDE 139
Query: 412 IKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFE 513
++ F+ G + EV + KG F+ ++
Sbjct: 140 VRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 148 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY 264
D A + DD+KLF+G LS + S+ E+R F+ +
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATF 147
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 35.5 bits (78), Expect = 0.032
Identities = 23/94 (24%), Positives = 43/94 (45%)
Frame = +1
Query: 232 DKELRDHFSAYVFKAPDSIDKVMAAGEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDE 411
D +R + + K +++ M +S+ PK K K+F+G LS + S+DE
Sbjct: 81 DSAVRCQATLHDQKTLPGMNRAMQVKPADTDSRPASPKD-KMDDKKLFIGMLSKQQSEDE 139
Query: 412 IKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFE 513
++ F+ G + EV + KG F+ ++
Sbjct: 140 VRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +1
Query: 148 DGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY 264
D A + DD+KLF+G LS + S+ E+R F+ +
Sbjct: 109 DTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATF 147
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES-EQVVNELLKT 546
++V L + DD +K F + GNI ++ D+ + KGF F+ FE E+ + + +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAVTEM 317
Query: 547 PKQTIGGNEVDVKRATPKPD 606
+ + + V A K D
Sbjct: 318 NSKMVCSKPLYVAIAQRKED 337
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 35.1 bits (77), Expect = 0.042
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPF-DKTKNQRKGFCFITFESEQVVNELLK 543
+++VGG S+ +S ++I+N + + EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL- 68
Query: 544 TPKQTIGGNEVDVKRATPKP 603
K + +V+ + PKP
Sbjct: 69 -AKFSGLFTKVNFAKKEPKP 87
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 34.3 bits (75), Expect = 0.073
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Frame = +1
Query: 394 EISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNE 573
+ +D+E+K F ++ + D+ KGF ++TFE+EQ +N + GN
Sbjct: 30 KFTDEELKKF--------DIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGADFGNR 81
Query: 574 V-DVKRA--TPKPDGPGGMSG 627
V V RA + D GG G
Sbjct: 82 VLKVNRAQQRDRSDRGGGRGG 102
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 34.3 bits (75), Expect = 0.073
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 409 EIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKR 588
+++ FFS VG + +V + D + KG C++ F E+ V L Q + G + ++R
Sbjct: 40 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 34.3 bits (75), Expect = 0.073
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +1
Query: 409 EIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVDVKR 588
+++ FFS VG + +V + D + KG C++ F E+ V L Q + G + ++R
Sbjct: 185 DLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESVPLGLALNGQRLMGAPLQIQR 244
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.9 bits (74), Expect = 0.096
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMP 462
K+FVGGL S + + +I NFFS G ++V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 340 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.096
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 340 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFES 516
PKK ++FVG L +E+ + E+K FS G+I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDT 159
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.096
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEI----KNFFSNVGNIIEVEMPFDKTKN 480
H I++ K + ++F+G + S DEI K V ++I +P D K
Sbjct: 264 HEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKI 322
Query: 481 QRKGFCFITFESEQVVNEL 537
+ +GFCF+ F + +++
Sbjct: 323 KNRGFCFVDFIDHKTASDI 341
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 33.5 bits (73), Expect = 0.13
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 340 PKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIE 450
PKK ++FVG L +E+ + E+K FS G+I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
KIF+GGL + +++D++K + G + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
KIF+GGL + +++D++K + G + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
KIF+GGL + +++D++K + G + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.7 bits (71), Expect = 0.22
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
KIF+GGL + +++D++K + G + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQR-- 486
HT+ + + K+FVGG+S ++ I FF G + V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 487 ------KGFCFITFESEQVVNELL 540
+ F+ + EQ V +L+
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLM 270
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQR-- 486
HT+ + + K+FVGG+S ++ I FF G + V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 487 ------KGFCFITFESEQVVNELL 540
+ F+ + EQ V +L+
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLM 270
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 8/56 (14%)
Frame = +1
Query: 121 NGNSEHGGGDGQDNSA---EAPGRDD-----DRKLFVGGLSWETSDKELRDHFSAY 264
N EHG + ++ E P RD RK+FVGG+ W+ ++ L+D F +
Sbjct: 263 NFQQEHGNKNRDSDATWFGELPPRDYTSPTFSRKIFVGGVPWDITEAALKDSFGEF 318
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 32.3 bits (70), Expect = 0.29
Identities = 21/84 (25%), Positives = 36/84 (42%), Gaps = 8/84 (9%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQR-- 486
HT+ + + K+FVGG+S ++ I FF G + V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 487 ------KGFCFITFESEQVVNELL 540
+ F+ + EQ V +L+
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLM 270
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDK-TKNQRK 489
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 490 GFCFITFESEQVVNELLKT 546
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 31.9 bits (69), Expect = 0.39
Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 1/79 (1%)
Frame = +1
Query: 313 HTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDK-TKNQRK 489
H N +++ + IF+ GL +IS +EIK + + ++ F K +++ K
Sbjct: 33 HYNNLPRINETQVPQSKHTIFIRGLHGDISTEEIKEYIGE--KVGKISFDFVKVAQDKSK 90
Query: 490 GFCFITFESEQVVNELLKT 546
F + FE+ E ++T
Sbjct: 91 IFVAVRFENRDEAKEFMET 109
>Z68879-10|CAA93082.2| 473|Caenorhabditis elegans Hypothetical
protein K08F4.2 protein.
Length = 473
Score = 31.9 bits (69), Expect = 0.39
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Frame = +1
Query: 349 AKARHGKIFVGGLSSEI-------SDDEIKNFFSNVGNIIEVEMP---FDKTKNQRK-GF 495
A KI++GG++ EI ++ EIK F G I EV MP D + K F
Sbjct: 321 ANLNERKIYLGGITREIVPSNTAQAESEIKQVFYKYGEIEEVRMPRKVLDSPNDTSKHAF 380
Query: 496 CFITFESEQVVNELLK 543
FIT ++ V + +
Sbjct: 381 AFITMRNKAGVKAIFE 396
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 30.7 bits (66), Expect = 0.90
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 376 VGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITF 510
V LSS ++ ++++ F G I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1
Query: 124 GNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSDKELRDHFSAY 264
G GGG G++ + + L V LS T++K+LRD F +
Sbjct: 53 GGGGGGGGRGRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEF 99
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.90
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 307 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIE-VEMPFDKTKNQ 483
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 484 RKGFCFITFESEQVVNELLKTPKQTIGGNEVDVK 585
GFC T + E + L + +G ++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 30.7 bits (66), Expect = 0.90
Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +1
Query: 307 GEHTINSKKVDPKKAKARHGKIFVGGLSSEISDDEIKNFFSNVGNIIE-VEMPFDKTKNQ 483
G+HT + + K +FVG +S + SD+ I+ + GN+ + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 484 RKGFCFITFESEQVVNELLKTPKQTIGGNEVDVK 585
GFC T + E + L + +G ++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDK 471
++VG L S +++D I F+ +G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 30.7 bits (66), Expect = 0.90
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +1
Query: 163 SAEAPGRDDDRKLFVGGLSWETSDKELRDHFS 258
+AE + D R ++VG + W+++ E+ +HF+
Sbjct: 36 TAEEQEKTDARSVYVGNVDWKSTVSEIEEHFA 67
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1
Query: 142 GGDGQDNSAEAPGRDDDRK 198
GGDGQ NSA+ DDDR+
Sbjct: 894 GGDGQTNSADVTVNDDDRE 912
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 15/97 (15%)
Frame = +1
Query: 295 VMAAGEHTINSKKVDPKKAKARHG-KIFVGGLSSEISDDEIKNFFSNVGNII-------- 447
+M + + + K P A+ + K+F+GGL ++S++++ F G ++
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVLIDWPRRPE 280
Query: 448 ----EVEMPFDKTKNQR--KGFCFITFESEQVVNELL 540
E K R G+ F+ F E+ V EL+
Sbjct: 281 HNAERAEQELKKGSGSRAVTGYVFLVFTHERSVQELV 317
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 29.1 bits (62), Expect = 2.7
Identities = 13/52 (25%), Positives = 29/52 (55%)
Frame = +1
Query: 367 KIFVGGLSSEISDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQ 522
++++G L + SD ++++FF G + +V M + GF F+ F+ ++
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQR 46
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.1 bits (62), Expect = 2.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Frame = +1
Query: 370 IFVGGLSSEISDDEIKNFFSNVGNIIE------VEMPFDKTKNQRKGFCFITF 510
+FV G+S+ ++ I + FS G+I + +++ D+ + KG C ITF
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITF 255
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETSDKELRDHFSAY 264
G +D+K++VG L + +KE+ D F Y
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKY 32
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 178 GRDDDRKLFVGGLSWETSDKELRDHFSAY 264
G +D+K++VG L + +KE+ D F Y
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKY 32
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/41 (19%), Positives = 23/41 (56%)
Frame = +1
Query: 403 DDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQV 525
+ E+ +F GN++ + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -1
Query: 521 CSDSNVMKQNPFLWFFVLSKGISTSIIFPTLL 426
CS N++K PF+ FF + +I +LL
Sbjct: 283 CSSLNIVKSQPFIGFFAMFNATMATIASTSLL 314
>Z81069-1|CAB02990.1| 359|Caenorhabditis elegans Hypothetical
protein F25H9.1 protein.
Length = 359
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 418 NFFSNVGNIIEVEMPFDKTKNQRKGFCFIT 507
++F+N N+I+ E +D+ R FCFIT
Sbjct: 238 DYFTNYENLIKNESYYDEGIQCRGHFCFIT 267
>Z46343-8|CAA86461.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 79 NDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 234
ND + + +N N N+ +GG G N+ G +++ G +WE+++
Sbjct: 430 NDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNN-GNDGNNWESNN 480
>Z35598-9|CAA84658.1| 549|Caenorhabditis elegans Hypothetical
protein F10F2.9 protein.
Length = 549
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +1
Query: 79 NDNFAQDITTDNQLNGNSEHGGGDGQDNSAEAPGRDDDRKLFVGGLSWETSD 234
ND + + +N N N+ +GG G N+ G +++ G +WE+++
Sbjct: 430 NDGWGSSSSNNNNNNNNNNNGGTGGYSNNGGGWGSNNNNN-GNDGNNWESNN 480
>AL031633-3|CAD56609.1| 545|Caenorhabditis elegans Hypothetical
protein Y39A1A.5 protein.
Length = 545
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/69 (20%), Positives = 33/69 (47%)
Frame = +1
Query: 400 SDDEIKNFFSNVGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELLKTPKQTIGGNEVD 579
SDD+++ + + ++ P D+ N ++ E+ ++ L + ++ G D
Sbjct: 450 SDDDLEKMLAVIKETVDF-YPTDEYMNMKQSIFAEEKETADILVSLSRQSSESGRGTLTD 508
Query: 580 VKRATPKPD 606
+ +TP+PD
Sbjct: 509 TQPSTPQPD 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.135 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,221,730
Number of Sequences: 27780
Number of extensions: 292447
Number of successful extensions: 982
Number of sequences better than 10.0: 100
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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