Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J15
         (621 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    24   1.0  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   1.8  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               22   5.5  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   7.3  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   7.3  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   7.3  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   9.7  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 379 DNDNAENQNIVNSNRFELLDGQHI-EINDNMANEVRE 486
           DN NA+NQN  N N     D Q+  + N N  N+ R+
Sbjct: 433 DNQNADNQNANNQN----ADNQNANKQNGNRQNDNRQ 465



 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/35 (37%), Positives = 15/35 (42%)
 Frame = +1

Query: 382 NDNAENQNIVNSNRFELLDGQHIEINDNMANEVRE 486
           NDN +N N  N NR           NDN  N  R+
Sbjct: 461 NDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQ 495


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +1

Query: 94  AKDETQSPQKMSPPRSPWAKLLNRQGSKRQLPR 192
           ++D   S    SPPR P    +N    KR  PR
Sbjct: 126 SRDGPPSVSLSSPPREPGTPRINFTKLKRHHPR 158


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 166 QGSKRQLPRKVTTSARVNLNKCWS 237
           Q + R LPR +  S +   NKC S
Sbjct: 78  QKALRHLPRSMQDSTKKLFNKCKS 101


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/43 (20%), Positives = 20/43 (46%)
 Frame = +1

Query: 478 VRETCYTKRNQTCVVCKICH*FLHSRYNKQ*NKIMSSKNRLVR 606
           ++E C  + N+ C++ K     +H+        I S+  ++ R
Sbjct: 33  LKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 75


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 9/43 (20%), Positives = 20/43 (46%)
 Frame = +1

Query: 478 VRETCYTKRNQTCVVCKICH*FLHSRYNKQ*NKIMSSKNRLVR 606
           ++E C  + N+ C++ K     +H+        I S+  ++ R
Sbjct: 16  LKEVCVLQANRACILIKDLFDNVHNHIQNIFKIIKSTNEKITR 58


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -2

Query: 620 RYLRARTNLFLEDMILFHCLL 558
           RYL   TN F+  +    CL+
Sbjct: 74  RYLHTATNYFVTSLAFADCLV 94


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 118 QKMSPPRSPWAKLLNRQGSKRQLP 189
           Q     R PW +L   QG+ R  P
Sbjct: 233 QTYKKQRYPWVQLAGHQGNFRAGP 256


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 118 QKMSPPRSPWAKLLNRQGSKRQLP 189
           Q     R PW +L   QG+ R  P
Sbjct: 148 QTYKKQRYPWVQLAGHQGNFRAGP 171


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = +1

Query: 118 QKMSPPRSPWAKLLNRQGSKRQLP 189
           Q     R PW +L   QG+ R  P
Sbjct: 467 QTYKKQRYPWVQLAGHQGNFRAGP 490


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,950
Number of Sequences: 438
Number of extensions: 4108
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18460203
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)