Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_J11
         (309 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   1.9  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   1.9  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   1.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   2.6  
DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholi...    20   7.8  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   7.8  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   7.8  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   7.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   7.8  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 95  DQLKKPIYYWFDL 57
           D+ K  +Y WFDL
Sbjct: 147 DKSKPKVYQWFDL 159


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 95  DQLKKPIYYWFDL 57
           D+ K  +Y WFDL
Sbjct: 152 DKSKPKVYQWFDL 164


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 1.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 95  DQLKKPIYYWFDL 57
           D+ K  +Y WFDL
Sbjct: 152 DKSKPKVYQWFDL 164


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -1

Query: 279 GVPLVASAAVPFSILTSFTSCVTCSTAELTPSASA 175
           G P      +  +  T+ T+  T +T   T +ASA
Sbjct: 652 GAPATTITTITTTTTTTTTTTTTTTTPNTTQNASA 686


>DQ026032-1|AAY87891.1|  566|Apis mellifera nicotinic acetylcholine
           receptor alpha3subunit protein.
          Length = 566

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 276 VPLVASAAVPFSILTSFTSCVT 211
           VPL+    +   IL +F+ CVT
Sbjct: 300 VPLLGKFVLFTMILDTFSICVT 321


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 282 FGVPLVASAAVPFS 241
           FG+P+  +AA+P S
Sbjct: 263 FGLPVGVTAAIPTS 276


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 282 FGVPLVASAAVPFS 241
           FG+P+  +AA+P S
Sbjct: 263 FGLPVGVTAAIPTS 276


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = -1

Query: 282 FGVPLVASAAVPFS 241
           FG+P+  +AA+P S
Sbjct: 263 FGLPVGVTAAIPTS 276


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 11/43 (25%), Positives = 20/43 (46%)
 Frame = -1

Query: 210 CSTAELTPSASADIFTHTTEIRNFSILFFSKVSSNLYQGSVEK 82
           C+T E TPS  +    H +  +  S L  +  S++L    + +
Sbjct: 355 CNTLERTPSKCSQTSVHYSNGQTHSQLCPTPRSTHLKVSGINR 397


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,918
Number of Sequences: 438
Number of extensions: 1328
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  6471036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)