Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J06
(538 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 246 9e-66
03_01_0034 + 318432-318825,318902-319851 244 5e-65
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 244 5e-65
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 244 5e-65
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 243 6e-65
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 243 6e-65
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 242 1e-64
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 237 3e-63
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 101 4e-22
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 101 5e-22
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 101 5e-22
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 99 1e-21
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 47 8e-06
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 2.3
02_05_0453 + 29132041-29132293,29133309-29133388,29133622-291337... 29 2.3
02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622 29 3.1
02_05_1298 - 35542250-35542831,35543218-35543410,35543511-355438... 28 4.1
11_01_0595 + 4732330-4732723,4732839-4732903,4733023-4733143,473... 28 5.4
08_01_0469 - 4127950-4127988,4127989-4128264,4128845-4130861,413... 28 5.4
04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280 28 5.4
12_02_0352 - 17862577-17863528,17864076-17864827 27 7.2
07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837 27 7.2
01_05_0465 + 22485728-22485835,22486125-22486955 27 7.2
06_03_1183 + 28237467-28237612,28238035-28238089,28238216-282383... 27 9.5
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 27 9.5
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 246 bits (602), Expect = 9e-66
Identities = 108/122 (88%), Positives = 120/122 (98%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
AATF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQ
Sbjct: 364 AATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 244 bits (596), Expect = 5e-65
Identities = 108/122 (88%), Positives = 118/122 (96%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 244 bits (596), Expect = 5e-65
Identities = 107/122 (87%), Positives = 119/122 (97%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M
Sbjct: 325 DPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSM 384
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 385 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 444
Query: 369 QY 374
QY
Sbjct: 445 QY 446
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 244 bits (596), Expect = 5e-65
Identities = 107/122 (87%), Positives = 119/122 (97%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 243 bits (595), Expect = 6e-65
Identities = 106/122 (86%), Positives = 119/122 (97%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M
Sbjct: 484 DPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSM 543
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 544 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 603
Query: 369 QY 374
QY
Sbjct: 604 QY 605
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 243 bits (595), Expect = 6e-65
Identities = 107/122 (87%), Positives = 119/122 (97%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 242 bits (592), Expect = 1e-64
Identities = 107/122 (87%), Positives = 119/122 (97%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRG+MS KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM
Sbjct: 304 DPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TFIGNST+IQE+F+R+SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQ
Sbjct: 364 ASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 237 bits (581), Expect = 3e-63
Identities = 104/122 (85%), Positives = 117/122 (95%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT +A+FRGRMS KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL M
Sbjct: 320 DPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSM 379
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
A+TF+GNST+IQE+F+R+SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQ
Sbjct: 380 ASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQ 439
Query: 369 QY 374
QY
Sbjct: 440 QY 441
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 101 bits (242), Expect = 4e-22
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 306 DPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPG 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
++ A I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 366 GDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 101 bits (241), Expect = 5e-22
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 306 DPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPS 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
++ A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 366 GDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 101 bits (241), Expect = 5e-22
Identities = 45/129 (34%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL-- 182
DPRHG+Y+ ++RG + K+V+ + +I+ + + FV+W P K + PP +
Sbjct: 387 DPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPG 446
Query: 183 ------KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A I N+TA+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 447 GDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 506
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 507 AALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 99 bits (238), Expect = 1e-21
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 306 DPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPG 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
++ A I NST++ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 366 GDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDL 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 47.2 bits (107), Expect = 8e-06
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = +3
Query: 6 RDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK 185
++ +Y+++ I +G + +V E + I+ + F+EW P +++ + GL
Sbjct: 312 KEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVS-------GLM 364
Query: 186 MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDL 353
+A N T+I+ LF + Q+ + +++AFL Y E D EF E+ + L
Sbjct: 365 LA-----NHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESL 419
Query: 354 VSEYQ 368
V EY+
Sbjct: 420 VDEYK 424
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -3
Query: 314 LVH-ALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHG 153
LVH ALA + A+ + +RDAL L + + GRR +AG A G
Sbjct: 96 LVHRALAAAGASDVAAASRACRAWRDALRPLREAAALHARGRRVKHAAGAAAAAG 150
>02_05_0453 +
29132041-29132293,29133309-29133388,29133622-29133740,
29134131-29134191
Length = 170
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = -3
Query: 350 IVHVALRLRELHLVHALAGVPVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAG 171
+VH A LHLVHA++ V L E S EL D + L V + R AG
Sbjct: 67 LVHFARMADTLHLVHAVSS--VNNDLVYEKSQELMEDLAIEALKTSLVRTKARIVEGDAG 124
Query: 170 R 168
+
Sbjct: 125 K 125
>02_04_0447 + 22998353-22999033,22999665-22999831,22999965-23000622
Length = 501
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -1
Query: 358 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 236
E RS LL A N + +P+ + + LN++ N S+MR
Sbjct: 328 EMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMR 368
>02_05_1298 -
35542250-35542831,35543218-35543410,35543511-35543827,
35544144-35544186,35545845-35545900,35546028-35546102,
35546249-35546345,35546422-35546546,35547063-35547167,
35547295-35547432,35547758-35547831,35547995-35548065,
35548168-35548363,35548482-35548572,35549264-35549342,
35549431-35549491,35549745-35549814,35549913-35549987,
35550119-35550194,35550403-35550489,35550744-35550880,
35551000-35551063,35551351-35551415
Length = 958
Score = 28.3 bits (60), Expect = 4.1
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -1
Query: 337 LSASVNSISSMPSPVYQCKKALRLNIAVN 251
L+AS N+IS +P + C K RLN+ N
Sbjct: 142 LNASNNTISVLPDELAGCSKLFRLNLEGN 170
>11_01_0595 +
4732330-4732723,4732839-4732903,4733023-4733143,
4733596-4733687,4733850-4733915,4734106-4734125,
4734147-4734239,4734358-4734445,4734570-4734635,
4734728-4734843,4735410-4735500,4736133-4736234,
4736342-4736425,4736551-4736643,4736728-4736823,
4736914-4736999,4737528-4737606,4737675-4737788,
4737890-4737985,4738060-4738123,4738221-4738510,
4738901-4738956,4739060-4739177,4739287-4739367,
4739683-4739762,4740001-4740055,4740142-4740211,
4740279-4740468,4740567-4740690,4741055-4741129,
4741217-4741390
Length = 1112
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = -3
Query: 188 HLQSAGRDV-AHGGLHVVRDPFHEVRRV 108
H + G +V A GGLHV+ HE RR+
Sbjct: 742 HCSTEGAEVKALGGLHVIGTSLHESRRI 769
>08_01_0469 -
4127950-4127988,4127989-4128264,4128845-4130861,
4131134-4131987
Length = 1061
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +3
Query: 60 MSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM---AATFIGNSTAIQEL 230
++MKE+DE++ + +++ Y ++ I N + PR L M A +G + EL
Sbjct: 120 VAMKEIDEKLQEVATRHARYTIDNIAIN-PAGPATVDPRLLSMYKTLAELVGIEGPMDEL 178
Query: 231 FKRI 242
K +
Sbjct: 179 MKML 182
>04_04_0238 + 23839763-23840251,23841389-23841555,23841632-23842280
Length = 434
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = -1
Query: 358 ETRSFMLLSASVNSISSMPSPVYQCKKALRLNIAVNCSEMR 236
E RS LL A N + +PS + + LN++ N S+++
Sbjct: 264 EMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLK 304
>12_02_0352 - 17862577-17863528,17864076-17864827
Length = 567
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 281 ESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRD 132
E ++S GE + +L+ GG D+G R ++AH + V D
Sbjct: 4 EMISSAVVGETLNRVVSRLVSGGSHNDDGMRGNSMERLEMAHSRMEAVLD 53
>07_03_1539 + 27567397-27568985,27569153-27569279,27569361-27569837
Length = 730
Score = 27.5 bits (58), Expect = 7.2
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +3
Query: 129 WIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRR 272
WI N VK + D+P G K+ FI +++ Q+ A ++R
Sbjct: 568 WITNKVKESWSDVPLHGNKI-EWFINQGDMVKKAIASFPFQYQANYKR 614
>01_05_0465 + 22485728-22485835,22486125-22486955
Length = 312
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 111 SSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQEL 230
++YF++ P N DIPP + +I + ++ EL
Sbjct: 99 ATYFIQHRPKNTAADFPDIPPAARESLDAYIAQAVSLAEL 138
>06_03_1183 +
28237467-28237612,28238035-28238089,28238216-28238354,
28238433-28238487,28238578-28238646,28239338-28239560,
28239645-28239740,28240708-28240827,28240937-28241062,
28241369-28241524,28242706-28242828,28242913-28242980,
28243119-28243254,28243365-28243530,28243615-28243853
Length = 638
Score = 27.1 bits (57), Expect = 9.5
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRV 108
L+ L+ +G +T+E RR + D GG+H+ +D V +
Sbjct: 75 LYNAILKAESEGVMLTEEARRAATTLRVDFEKGGIHLPKDKLEHVNHL 122
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 27.1 bits (57), Expect = 9.5
Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Frame = -3
Query: 311 VHALAGVPVQESLASEHSGELFRDALEQL--------LDGGRVTDEGRRHLQSAGRDVAH 156
V+A+ G+ V E L +E+ L + L+ G+ G+R ++ GR++
Sbjct: 235 VNAVEGLKVYEGLVNENEKNKILSLLNETKASFRRGGLEAGQTVIIGKRPMKGHGREIIQ 294
Query: 155 GGLHVVRDPFHE--VRRVLVLNVKHLLIDFLHR 63
G+ +V P + R V V LL D R
Sbjct: 295 LGIPIVEGPPEDDYPRETKVEAVPGLLHDLFDR 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,646,223
Number of Sequences: 37544
Number of extensions: 206441
Number of successful extensions: 785
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1186491600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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