Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J06
(538 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 259 1e-69
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 258 1e-69
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 258 2e-69
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 258 2e-69
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 256 6e-69
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 256 7e-69
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 145 2e-35
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 145 2e-35
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 101 3e-22
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 101 3e-22
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 101 3e-22
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 101 3e-22
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 100 6e-22
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 100 1e-21
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 100 1e-21
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 100 1e-21
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 100 1e-21
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 98 4e-21
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 98 4e-21
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 97 7e-21
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 96 1e-20
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 96 1e-20
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 96 1e-20
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 85 3e-17
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 2e-10
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 3.7
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 3.7
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 3.7
AF039048-1|AAB94237.2| 480|Caenorhabditis elegans Cell division... 28 4.9
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 6.5
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 6.5
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 6.5
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 6.5
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 6.5
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 6.5
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 27 8.6
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 27 8.6
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 259 bits (634), Expect = 1e-69
Identities = 118/122 (96%), Positives = 122/122 (100%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLTVAA+FRGRMSMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
AATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 364 AATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 258 bits (633), Expect = 1e-69
Identities = 117/122 (95%), Positives = 122/122 (100%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLTVAA+FRGRMSM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
AATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQ
Sbjct: 364 AATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 258 bits (632), Expect = 2e-69
Identities = 119/122 (97%), Positives = 121/122 (99%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 364 SATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 258 bits (632), Expect = 2e-69
Identities = 119/122 (97%), Positives = 121/122 (99%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLT AAIFRGRMSMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTAAAIFRGRMSMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 364 SATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 256 bits (628), Expect = 6e-69
Identities = 116/122 (95%), Positives = 122/122 (100%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLTVAA+FRGRMSM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
AATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL+SEYQ
Sbjct: 364 AATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 256 bits (627), Expect = 7e-69
Identities = 116/122 (95%), Positives = 122/122 (100%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 188
DPRHGRYLTVAA+FRGRMSM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM
Sbjct: 304 DPRHGRYLTVAAMFRGRMSMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKM 363
Query: 189 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 368
+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ
Sbjct: 364 SATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 423
Query: 369 QY 374
QY
Sbjct: 424 QY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 145 bits (352), Expect = 2e-35
Identities = 67/124 (54%), Positives = 94/124 (75%)
Frame = +3
Query: 3 TRDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL 182
T + G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGL
Sbjct: 300 TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGL 359
Query: 183 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 362
K +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE
Sbjct: 360 KTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISE 416
Query: 363 YQQY 374
+QQY
Sbjct: 417 FQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 145 bits (352), Expect = 2e-35
Identities = 67/124 (54%), Positives = 94/124 (75%)
Frame = +3
Query: 3 TRDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL 182
T + G++L+ A I+RG+ + K+ EQ+++++N++ S +E +P + T VCDIP RGL
Sbjct: 300 TCNHNQGKFLSSAIIYRGQQTEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGL 359
Query: 183 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSE 362
K +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE+ +NDL+SE
Sbjct: 360 KTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISE 416
Query: 363 YQQY 374
+QQY
Sbjct: 417 FQQY 420
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 101 bits (242), Expect = 3e-22
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 306 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 366 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 101 bits (242), Expect = 3e-22
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 305 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 364
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 365 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 424
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 425 AALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 101 bits (242), Expect = 3e-22
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 306 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 366 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 101 bits (242), Expect = 3e-22
Identities = 47/129 (36%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V +FRG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 306 DPRHGKYMAVCLLFRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 366 GDLAKVPRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 100 bits (240), Expect = 6e-22
Identities = 46/129 (35%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPR+G+Y+ ++RG + KE++ + I+ K + FV+W P K + PP
Sbjct: 306 DPRNGKYMACCLLYRGDVVPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPG 365
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
L+ A + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M
Sbjct: 366 GDMAKLQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 425
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 426 AALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 424 AALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 424 AALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 424 AALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 99.5 bits (237), Expect = 1e-21
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPRHG+Y+ V ++RG + K+V+ + I+ K + FV+W P K + PP
Sbjct: 304 DPRHGKYMAVCLLYRGDVVPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 424 AALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.9 bits (233), Expect = 4e-21
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 304 DPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 424 AALEKDYEE 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 97.9 bits (233), Expect = 4e-21
Identities = 46/129 (35%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPR+G+Y+ V ++RG + K+V+ + I+ K S FV+W P K + PP
Sbjct: 304 DPRNGKYMAVCLLYRGDVVPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPG 363
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++
Sbjct: 364 GDLAKVPRAVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDL 423
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 424 AALEKDYEE 432
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 97.1 bits (231), Expect = 7e-21
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPR---- 176
DPR G+Y+ ++RG + K+V+ + +++ K S FV+W P K + PP
Sbjct: 311 DPRRGKYMACCLLYRGDVVPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPG 370
Query: 177 ----GLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
L+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 371 ADLSKLQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 430
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 431 AALEKDYEE 439
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK- 185
DPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP +
Sbjct: 312 DPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPG 371
Query: 186 -------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M
Sbjct: 372 GDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 431
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 432 AALEKDYEE 440
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK- 185
DP+HG+Y+ V ++RG + K+V + +I+ + S FV+W P K + PP +
Sbjct: 301 DPKHGKYMAVCLLYRGDVVPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPG 360
Query: 186 -------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
A + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++
Sbjct: 361 GDMAKVPRAVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDL 420
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 421 AALEKDYEE 429
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 96.3 bits (229), Expect = 1e-20
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLK- 185
DPR G+Y+ V ++RG + K+++ + ++ K + FVEW P K + PP +
Sbjct: 284 DPRRGKYMAVCLLYRGDVVPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPG 343
Query: 186 -------MAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M
Sbjct: 344 GDLGKQTRSVCMISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDM 403
Query: 345 NDLVSEYQQ 371
L +Y++
Sbjct: 404 AALEKDYEE 412
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 85.0 bits (201), Expect = 3e-17
Identities = 41/129 (31%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Frame = +3
Query: 9 DPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---CDIPPRG 179
DP G+Y+ V ++RG + K+V+ + +++ K FV+W P K + I G
Sbjct: 309 DPSAGKYMAVCLLYRGDVVPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEG 368
Query: 180 -----LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNM 344
+ A + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++
Sbjct: 369 GDLAKVHRAVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDL 428
Query: 345 NDLVSEYQQ 371
L +Y +
Sbjct: 429 AALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.1 bits (144), Expect = 2e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +3
Query: 201 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 371
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 159 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 314
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 315 MEFTEAESNMNDLVSEY 365
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 159 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 314
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 315 MEFTEAESNMNDLVSEY 365
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 28.3 bits (60), Expect = 3.7
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 159 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 314
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 315 MEFTEAESNMNDLVSEY 365
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>AF039048-1|AAB94237.2| 480|Caenorhabditis elegans Cell division
cycle related protein25.2 protein.
Length = 480
Score = 27.9 bits (59), Expect = 4.9
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 464 CS*PSPNPHTHPATC 508
CS +P+PH HP TC
Sbjct: 462 CSRETPSPHKHPLTC 476
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 6.5
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 271 RLNIAVNCSEMRLNSSWMAVELPMKVAAIFSPR 173
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 71 LHRHT 57
L T
Sbjct: 813 LESMT 817
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 71 LHRHT 57
L T
Sbjct: 811 LESMT 815
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 71 LHRHT 57
L T
Sbjct: 813 LESMT 817
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 71 LHRHT 57
L T
Sbjct: 813 LESMT 817
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 71 LHRHT 57
L T
Sbjct: 811 LESMT 815
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 71 LHRHT 57
L T
Sbjct: 813 LESMT 817
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 183 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 353
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 354 VSEYQ 368
+ EY+
Sbjct: 428 LDEYK 432
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 6.5
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 251 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 72
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 71 LHRHT 57
L T
Sbjct: 813 LESMT 817
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 183 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 353
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 354 VSEYQ 368
+ EY+
Sbjct: 428 LDEYK 432
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 33 TVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 131
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 290 PVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 120
P +++ S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 290 PVQESLASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 120
P +++ S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,310,683
Number of Sequences: 27780
Number of extensions: 158105
Number of successful extensions: 565
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 547
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1070714938
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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