Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J03
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0924 - 25976629-25976979,25977471-25978424,25978512-259785... 81 7e-16
10_08_0006 - 14035990-14036135,14036246-14036339,14036845-140371... 55 3e-08
08_01_0068 + 471729-472460,472578-472655,473270-473507,474130-47... 53 1e-07
06_02_0325 + 14428065-14428799,14428916-14428993,14429607-144298... 53 1e-07
07_03_0538 + 19231318-19231382,19231652-19232390,19232468-192325... 52 2e-07
08_01_0186 - 1561695-1561958,1562041-1562183,1562260-1562326,156... 45 3e-05
01_01_0802 + 6246267-6247541,6247625-6247682,6247806-6248129,624... 45 4e-05
02_04_0513 - 23569212-23569675,23569759-23569801,23569888-235700... 44 7e-05
04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260 44 1e-04
04_04_1198 - 31679584-31679642,31679740-31679854,31680701-316807... 43 1e-04
03_01_0219 + 1731267-1731728,1732148-1732235,1732330-1732417,173... 42 2e-04
01_06_0069 - 26169818-26169904,26170186-26170893 42 2e-04
08_01_0619 + 5412058-5413224,5413357-5413476,5413755-5413831,541... 42 3e-04
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 40 0.001
07_03_0562 + 19535801-19535865,19535972-19536017,19536125-195362... 39 0.002
02_02_0277 + 8489717-8491468,8491571-8491610,8491719-8491841,849... 39 0.003
06_01_0273 + 2022479-2022592,2022830-2022973,2023524-2023601,202... 38 0.005
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 32 0.24
06_03_0597 - 22616859-22616935,22617225-22617308,22617637-22617832 32 0.32
04_04_0996 + 29990255-29990425,29990797-29990841,29991024-299910... 29 2.2
02_02_0187 + 7611922-7614099,7614692-7614795,7614828-7614996 29 2.2
07_03_0111 + 13535912-13535972,13536081-13536142,13536418-135365... 29 3.0
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 29 3.0
02_02_0307 - 8809724-8811589,8811681-8811762,8812130-8812242,881... 29 3.0
03_02_0895 + 12230683-12230844,12230937-12230991,12231106-122311... 28 3.9
02_04_0011 - 18887713-18887725,18887796-18888070 28 3.9
03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820 28 5.2
12_01_0504 + 3999157-4000470 27 6.8
08_02_0940 - 22822391-22822781,22822875-22823053,22823079-228234... 27 6.8
08_01_0955 + 9478018-9478773 27 6.8
01_01_0055 - 415666-415767,416510-416602,416776-416850,416920-41... 27 6.8
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 27 9.0
03_06_0700 + 35616619-35617069,35619123-35619502 27 9.0
03_06_0620 - 35142280-35142294,35143149-35143294,35144826-35145045 27 9.0
03_06_0495 + 34323082-34323173,34323600-34323742,34324265-343243... 27 9.0
02_03_0375 + 18287281-18288168 27 9.0
>06_03_0924 - 25976629-25976979,25977471-25978424,25978512-25978565,
25979135-25979254,25979357-25979532,25979624-25980107,
25980541-25980744,25981671-25981877,25982179-25982271,
25982433-25982621,25983364-25983423,25983591-25983927,
25984195-25984432,25984614-25984816,25985549-25986554,
25987125-25987290,25987715-25987824,25987944-25988195,
25988360-25988402,25988488-25988550,25989512-25989624,
25990787-25990838
Length = 1824
Score = 80.6 bits (190), Expect = 7e-16
Identities = 47/107 (43%), Positives = 62/107 (57%)
Frame = +1
Query: 175 GRTKRRGTGADPCEYLVRRPAERRRTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKL 354
GR +R T AD EY PA+R R V LS++LE ++ H+R + F PV K
Sbjct: 1683 GRAAKRRTPADMTEYTP--PAKRHRGGE-VELSNILEKIVDHLRTMSCSFLFRKPVTKKE 1739
Query: 355 VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
DY+ I+ RPMDL TI D +R+ Y++REDF DV QI N+ YN
Sbjct: 1740 APDYFDIIERPMDLGTIRDKVRKMEYKNREDFRHDVAQIALNAHTYN 1786
>10_08_0006 -
14035990-14036135,14036246-14036339,14036845-14037176,
14038040-14038094,14038682-14038750,14038940-14039039,
14039212-14039255,14039705-14039873,14040262-14040333,
14040439-14040519,14040586-14040650,14040796-14041260
Length = 563
Score = 55.2 bits (127), Expect = 3e-08
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 289 VLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLR-QKHYQSREDFLADVN 465
+ +M PD PF PV+ + V DYY I+ P+DL+T++ + +++Y + E F+AD+
Sbjct: 482 IFLNMNEHPDAWPFKEPVDSRDVPDYYDIIKDPIDLKTMSKRVESEQYYVTLEMFVADMK 541
Query: 466 QIVENSTLYNGP 501
++ N+ YN P
Sbjct: 542 RMFSNAKTYNSP 553
>08_01_0068 +
471729-472460,472578-472655,473270-473507,474130-474205,
474820-474961,475326-475619,476037-476249
Length = 590
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 238 ERRRTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKL--VADYYRIVSRPMDLQTITD 411
ER+R D L++ LE + K M+ + +PF PV+P + DY+ I+ PMD TI
Sbjct: 231 ERQRDDR--ELTAALEAIKKVMK-MDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQ 287
Query: 412 NL-RQKHYQSREDFLADVNQIVENSTLYN 495
NL R Y + ED DV I +N T YN
Sbjct: 288 NLERGDKYMNSEDVYKDVQFIWDNCTKYN 316
>06_02_0325 +
14428065-14428799,14428916-14428993,14429607-14429844,
14431199-14431296,14431770-14432063,14432418-14432702
Length = 575
Score = 53.2 bits (122), Expect = 1e-07
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Frame = +1
Query: 238 ERRRTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKL--VADYYRIVSRPMDLQTITD 411
ER+R D L++ LE + K M+ + +PF PV+P + DY+ I+ PMD TI
Sbjct: 232 ERQRDDR--ELTAALEAIKKVMK-MDAAEPFNTPVDPVALGIPDYFDIIDTPMDFGTICQ 288
Query: 412 NL-RQKHYQSREDFLADVNQIVENSTLYN 495
NL R Y + ED DV I +N T YN
Sbjct: 289 NLERGDKYMNSEDVYKDVQFIWDNCTKYN 317
>07_03_0538 +
19231318-19231382,19231652-19232390,19232468-19232516,
19232600-19232664,19232774-19232828,19234107-19234225,
19234346-19234412,19235316-19235437,19235521-19235790
Length = 516
Score = 52.4 bits (120), Expect = 2e-07
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 3/94 (3%)
Frame = +1
Query: 229 RPAERRRTDPLVTLSSLLEG-VLKHMRHLPDVQPFFFPVNPKL--VADYYRIVSRPMDLQ 399
+P + + DP+ T S G +LK + F PV+P + + DY+ ++ PMDL
Sbjct: 99 QPTSKNKVDPMNTSKSRQCGSILKKLMDHKSGWIFNTPVDPVVYGIPDYFDVIRNPMDLG 158
Query: 400 TITDNLRQKHYQSREDFLADVNQIVENSTLYNGP 501
T+ L K Y + +F ADV N+ YN P
Sbjct: 159 TVKRKLTSKQYSNPYEFAADVRLTFSNAMKYNPP 192
>08_01_0186 -
1561695-1561958,1562041-1562183,1562260-1562326,
1562417-1562529,1562603-1562671,1563831-1563870,
1563965-1564035,1565872-1566027,1566104-1566152,
1566228-1567631
Length = 791
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/74 (35%), Positives = 37/74 (50%)
Frame = +1
Query: 274 SLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFL 453
+LL+ + KH P + P V + DY+ I+ +PMDL TI L Y + DF
Sbjct: 168 NLLKNLFKHQWAGPFLAPV--DVVQLNIPDYFDIIKKPMDLGTIEKKLNAGMYSTPWDFA 225
Query: 454 ADVNQIVENSTLYN 495
ADV +N+ YN
Sbjct: 226 ADVRLTFDNAVTYN 239
>01_01_0802 +
6246267-6247541,6247625-6247682,6247806-6248129,
6248321-6248355
Length = 563
Score = 44.8 bits (101), Expect = 4e-05
Identities = 18/45 (40%), Positives = 27/45 (60%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
DY+ I+++PMDL T+ L HY+S +F DV +N+ YN
Sbjct: 175 DYHTIITKPMDLGTVKSRLAAGHYKSPREFAGDVRLTFQNAMRYN 219
>02_04_0513 -
23569212-23569675,23569759-23569801,23569888-23570000,
23570099-23570158,23570472-23570541,23570887-23570951,
23571548-23571685,23571764-23573015
Length = 734
Score = 44.0 bits (99), Expect = 7e-05
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 355 VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
+ DY++I+ +PMDL TI + L Y S +F ADV N+ YN
Sbjct: 192 IPDYFQIIKKPMDLGTIRNKLDSGSYTSPSEFAADVRLTFSNAMTYN 238
>04_04_1201 - 31697707-31697765,31697863-31698013,31698100-31699260
Length = 456
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
DY+ ++ PMDL T+ NL Y S +DF ADV N+ YN
Sbjct: 153 DYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADVRLTFSNALRYN 197
>04_04_1198 -
31679584-31679642,31679740-31679854,31680701-31680790,
31682207-31683010
Length = 355
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
DY+ ++ PMDL T+ NL Y S +DF AD+ N+ YN
Sbjct: 34 DYHAVIKCPMDLGTVRANLAAGRYPSHDDFAADIRLTFSNALRYN 78
>03_01_0219 +
1731267-1731728,1732148-1732235,1732330-1732417,
1732528-1732573,1732687-1732785,1734363-1734431,
1735706-1736036,1736123-1736256,1736400-1737251
Length = 722
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/73 (31%), Positives = 35/73 (47%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
LL +L ++ F PV+ + + DY+ I+ PMD TI + L Y + E F
Sbjct: 203 LLLFILDRLQKKDTYGVFSEPVDHEELPDYHEIIEHPMDFSTIREKLLNDSYTTLEQFEN 262
Query: 457 DVNQIVENSTLYN 495
DV + N+ YN
Sbjct: 263 DVFLLTSNAMSYN 275
>01_06_0069 - 26169818-26169904,26170186-26170893
Length = 264
Score = 42.3 bits (95), Expect = 2e-04
Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Frame = +1
Query: 253 DPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKLV--ADYYRIVSRPMDLQTITDNLRQK 426
D L+ LL+ +L+H D F PV+ + + DYY +S PMDL T+ L ++
Sbjct: 51 DALLRCGKLLDKLLEH----EDGWVFAEPVDARALRLVDYYLRISDPMDLGTVRRRLERR 106
Query: 427 HYQSREDFLADVNQIVENSTLYN 495
Y F ADV N+ YN
Sbjct: 107 RYADPWAFAADVRLTFNNAMSYN 129
>08_01_0619 +
5412058-5413224,5413357-5413476,5413755-5413831,
5414201-5414321
Length = 494
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
DY+ I+ PMDL T+ +NL Y S E F DV N+ YN
Sbjct: 170 DYHAIIRNPMDLGTVKENLAFGRYPSHEAFATDVRLTFSNALRYN 214
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 39.9 bits (89), Expect = 0.001
Identities = 25/77 (32%), Positives = 36/77 (46%)
Frame = +1
Query: 232 PAERRRTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITD 411
P++ T PL LL VL ++ F PV+P+ + DY+ I+ PMD TI
Sbjct: 95 PSDSGPTTPLPD-KKLLVFVLDRLQKKDTYGVFSDPVDPEELPDYHDIIKHPMDFSTIRK 153
Query: 412 NLRQKHYQSREDFLADV 462
L + Y + E F V
Sbjct: 154 KLNKGAYGNLEQFEVSV 170
>07_03_0562 +
19535801-19535865,19535972-19536017,19536125-19536223,
19536588-19536674,19537545-19537613,19537702-19538710,
19539217-19539365,19539453-19540487,19540488-19541003
Length = 1024
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/74 (29%), Positives = 37/74 (50%)
Frame = +1
Query: 247 RTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQK 426
RT PL +L + +L ++ F PV+P+ + DY+ ++ PMD T+ L +
Sbjct: 3 RTTPLPDRKAL-DMILDKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFGTVRRKLARN 61
Query: 427 HYQSREDFLADVNQ 468
Y+S E F N+
Sbjct: 62 AYRSFEQFELQPNR 75
>02_02_0277 +
8489717-8491468,8491571-8491610,8491719-8491841,
8491959-8492014
Length = 656
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
DY+ I+ PMDL TI L Y++ +F DV N+ YN
Sbjct: 348 DYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDVRLTFHNAMTYN 392
>06_01_0273 +
2022479-2022592,2022830-2022973,2023524-2023601,
2025361-2025585,2025684-2025782,2026177-2026235,
2026351-2026501,2026590-2026754
Length = 344
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Frame = +1
Query: 322 QPFFFPVNPK--LVADYYRIVSRPMDLQTITDNLRQK---HYQSREDFLADVNQIVENST 486
+PF PV+ + DYY+I+++PMD TI + K Y + + +DV I N+
Sbjct: 94 EPFLKPVDVVGLQLDDYYKIITKPMDFSTIQKKMEGKDDNKYNNVREIYSDVRLIFANAM 153
Query: 487 LYN 495
YN
Sbjct: 154 KYN 156
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 32.3 bits (70), Expect = 0.24
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 373 IVSRPMDLQTITDNLRQ-KHYQSREDFLADVNQIVEN 480
+VSRP+D +TI L +Y S E FL DV +++ N
Sbjct: 971 MVSRPLDFRTIDIRLAMGAYYGSWEAFLEDVQEVIRN 1007
>06_03_0597 - 22616859-22616935,22617225-22617308,22617637-22617832
Length = 118
Score = 31.9 bits (69), Expect = 0.32
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 182 LNDAVPALTPAST*YGDPPSAGVPTLSSLSPP 277
++DAV A PA+ GDPP A PT ++++PP
Sbjct: 6 ISDAVAATPPAAAPAGDPP-AVTPTAAAVAPP 36
>04_04_0996 +
29990255-29990425,29990797-29990841,29991024-29991098,
29991481-29991691,29992057-29992442,29993202-29993425,
29993529-29993664,29993699-29993761,29993842-29994021
Length = 496
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 175 GRTKRRGTGADPCEYLVRRPAERRRTDPLVTLSSLLEGVLKHMRHLPDV-QPFFFPVNPK 351
G+ + G ++PC Y ++ T + + LEG L P+ QP NPK
Sbjct: 362 GKAENHGHSSEPCRYQENLATKKNPTVLIEEVKKELEGELSRQHPCPNCRQP-----NPK 416
Query: 352 LVADYY 369
+V D +
Sbjct: 417 IVEDNF 422
>02_02_0187 + 7611922-7614099,7614692-7614795,7614828-7614996
Length = 816
Score = 29.1 bits (62), Expect = 2.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 196 TGADPCEYLVRRPAERRRTDPL 261
+ + P E+L+RRPA RRR PL
Sbjct: 6 SASSPVEFLLRRPAPRRRRLPL 27
>07_03_0111 +
13535912-13535972,13536081-13536142,13536418-13536510,
13537577-13537649,13537876-13538265,13538337-13538404,
13539334-13539375,13540211-13540735,13540817-13540974,
13541078-13541636,13542438-13542500,13542579-13542680,
13542779-13543096,13543175-13543267,13543489-13543590,
13543678-13543782,13544190-13544323,13545097-13545280,
13545701-13545832,13546215-13546327,13546468-13546558,
13547138-13549339
Length = 1889
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 346 PKLVADYYRIVSRPMDLQTITDNLRQKHYQSR 441
PKLVAD+ + P+D +T+TD + + Q R
Sbjct: 696 PKLVADFGSLELSPVDGRTLTDFMHTRGLQMR 727
>03_01_0414 +
3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 197 PALTPAST*YGDPPSAGVPTLSSLSP 274
P+ +PAS+ G PP+ V T+SS SP
Sbjct: 34 PSPSPASSPSGGPPALSVSTVSSSSP 59
>02_02_0307 -
8809724-8811589,8811681-8811762,8812130-8812242,
8812361-8812492,8812681-8812864,8813002-8813135,
8813552-8813656,8813738-8813839,8813930-8814022,
8814136-8814456,8814595-8814696,8814791-8814853,
8815213-8815708,8815964-8816124,8816213-8816743,
8817077-8817118,8817203-8817334,8817639-8817703,
8817858-8818169,8818262-8818334,8818425-8818517,
8819440-8819501,8819740-8819809
Length = 1777
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +1
Query: 346 PKLVADYYRIVSRPMDLQTITDNLRQKHYQSR 441
PKLVAD+ + P+D +T+TD + + Q R
Sbjct: 698 PKLVADFGSLELSPVDGRTLTDFMHTRGLQMR 729
>03_02_0895 +
12230683-12230844,12230937-12230991,12231106-12231169,
12231292-12231334,12231509-12231607,12231710-12231778,
12231912-12232245,12232317-12232471,12232592-12233287
Length = 558
Score = 28.3 bits (60), Expect = 3.9
Identities = 18/73 (24%), Positives = 31/73 (42%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
++E +L + + D F + V DY V+RP D T+ + Y + E F
Sbjct: 84 IIEYILDTLE-MRDTHELFAMPDDIQVTDYAERVNRPGDFATLRQKNKDGMYNTLEQFEN 142
Query: 457 DVNQIVENSTLYN 495
DV + + + N
Sbjct: 143 DVYMVFQKAMSIN 155
>02_04_0011 - 18887713-18887725,18887796-18888070
Length = 95
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 245 GVPTLSSLSPPYWRASSNTCAICPTCN 325
G+P LS+LSP R S+ A+ P+C+
Sbjct: 58 GLPELSALSPLESRRSAGVSALSPSCS 84
>03_02_0256 + 6899424-6899876,6900084-6900163,6900475-6900820
Length = 292
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +2
Query: 233 PPSAGV--PTLSSLSPPYWRASSNTCAICPTCNRSSFPST 346
PPS+ P+ + +P Y + + T ICP+C R P++
Sbjct: 221 PPSSAAHQPSPAPPAPFYMQLPAATLTICPSCERVGGPAS 260
>12_01_0504 + 3999157-4000470
Length = 437
Score = 27.5 bits (58), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 324 TVLLSRQP*VGRGLLSHRISTYGF 395
T L+ R+P G G SHR +T GF
Sbjct: 36 TQLIIREPVTGTGAASHRTTTTGF 59
>08_02_0940 -
22822391-22822781,22822875-22823053,22823079-22823428,
22823522-22823765
Length = 387
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 242 AGVPTLSSLSPPYWRASSNTCAICPTCNR-SSFPSTLSWS 358
A + L + P Y + T ++CP+C R +S P+T S S
Sbjct: 290 AELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTS 329
>08_01_0955 + 9478018-9478773
Length = 251
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +2
Query: 197 PALTPAST*YGDPPSAGVPTLSSLSPPYWRA--SSNTCAICPT-CNRSSFPSTLS 352
PA+TP+S P AG + ++ P W ++ C CP+ C R++ P + S
Sbjct: 75 PAVTPSSATPATAPCAGAGSTTTAPPAAWTCTRAAPRCR-CPSRCRRAAPPPSSS 128
>01_01_0055 -
415666-415767,416510-416602,416776-416850,416920-417071,
417147-417267,417567-418289,418408-418489,418575-418681,
418757-418822,418941-419057,419157-419402
Length = 627
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +2
Query: 233 PPSAGVPTLSSLSPPYWRASSNTCAICPTCNRSSFPSTLSWSRIT 367
PPSA ++ S RASS C + + S+ PST W+R T
Sbjct: 24 PPSAAHLPSAAASR---RASSAACRCTASASASASPSTWDWTRWT 65
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 247 RTDPLVTLSSLLEGVLKHMR-HLPDVQPFFFPVNPKLVADYYRI 375
R P++T S L V+ + L + P+ +NPKLV +Y I
Sbjct: 10 RQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEI 53
>03_06_0700 + 35616619-35617069,35619123-35619502
Length = 276
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 233 PPSAGVPTLSSLSPPYWRAS 292
P SA VP L SPP WR S
Sbjct: 23 PVSARVPLLPRASPPTWRLS 42
>03_06_0620 - 35142280-35142294,35143149-35143294,35144826-35145045
Length = 126
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +2
Query: 191 AVPALTPAST*YGDPPSAGVPTLSSLSPPY 280
A PA PA T PP + PT S + P Y
Sbjct: 12 AAPAPAPAPTPAPPPPPSSPPTKSGIPPRY 41
>03_06_0495 +
34323082-34323173,34323600-34323742,34324265-34324315,
34324405-34324626,34324731-34324833,34325156-34325552,
34326564-34326735,34326995-34327089,34327246-34327455
Length = 494
Score = 27.1 bits (57), Expect = 9.0
Identities = 12/24 (50%), Positives = 17/24 (70%), Gaps = 2/24 (8%)
Frame = -3
Query: 493 YKECYSQQSGLRPQG--NLPGSDS 428
+KECY++ S LR +G LPG D+
Sbjct: 306 WKECYNEPSSLREKGLVVLPGEDA 329
>02_03_0375 + 18287281-18288168
Length = 295
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = -1
Query: 321 HVGQMAHVFEDALQ*GGESDERVGTP 244
HV Q A V + A Q GGE ERVG P
Sbjct: 267 HVVQGAVVSQGAEQTGGERRERVGEP 292
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.136 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,611,646
Number of Sequences: 37544
Number of extensions: 258885
Number of successful extensions: 948
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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