Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J03
(519 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 81 4e-16
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 81 4e-16
AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp ass... 57 9e-09
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 55 3e-08
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 55 3e-08
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 55 4e-08
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 54 5e-08
Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical p... 54 6e-08
Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical pr... 54 6e-08
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical p... 51 4e-07
Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical pr... 51 4e-07
Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical pr... 48 4e-06
Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-lik... 48 4e-06
AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily a... 47 9e-06
AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily a... 47 9e-06
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 44 9e-05
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 44 9e-05
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 44 9e-05
AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical ... 40 8e-04
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 34 0.070
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 34 0.070
U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 29 1.5
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.5
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.5
U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five) in... 28 3.5
Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical pr... 27 6.1
U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonin... 27 6.1
U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonin... 27 6.1
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical protein
W04A8.7 protein.
Length = 1792
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = +1
Query: 181 TKRRGTGADPCEYLVR--RPAERRRTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKL 354
+KRR + +YL + A R R DP V +SS+L ++ ++ + F PVN K
Sbjct: 1430 SKRRSSMMPEEDYLQGPLKVAHRARADPKVVMSSMLTDIVNELKMISGSDAFVTPVNSKK 1489
Query: 355 VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSLTV 519
V DYY I+ P+ LQ I + ++ Y R+DFL D+ + +NS +YNG + LT+
Sbjct: 1490 VVDYYNIIKNPISLQEIKKKISEQSYLLRKDFLDDIKLMFDNSRMYNGDNNILTL 1544
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +1
Query: 250 TDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKH 429
T+ L+ S LL +++ M+++P F V+PK + YY +S PMDL + + +
Sbjct: 1577 TNDLIGFSYLLGEIVQKMKNIPKSALFHTRVDPKKIPAYYLKISDPMDLSIMEQKSKSQE 1636
Query: 430 YQSREDFLADVNQIVENSTLYNGPTS 507
Y+S ++FL D +I NS ++NG S
Sbjct: 1637 YKSIDEFLKDAEKIYTNSVVFNGAES 1662
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 81.4 bits (192), Expect = 4e-16
Identities = 41/115 (35%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
Frame = +1
Query: 181 TKRRGTGADPCEYLVR--RPAERRRTDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKL 354
+KRR + +YL + A R R DP V +SS+L ++ ++ + F PVN K
Sbjct: 1430 SKRRSSMMPEEDYLQGPLKVAHRARADPKVVMSSMLTDIVNELKMISGSDAFVTPVNSKK 1489
Query: 355 VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSLTV 519
V DYY I+ P+ LQ I + ++ Y R+DFL D+ + +NS +YNG + LT+
Sbjct: 1490 VVDYYNIIKNPISLQEIKKKISEQSYLLRKDFLDDIKLMFDNSRMYNGDNNILTL 1544
Score = 60.9 bits (141), Expect = 5e-10
Identities = 29/86 (33%), Positives = 49/86 (56%)
Frame = +1
Query: 250 TDPLVTLSSLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKH 429
T+ L+ S LL +++ M+++P F V+PK + YY +S PMDL + + +
Sbjct: 1577 TNDLIGFSYLLGEIVQKMKNIPKSALFHTRVDPKKIPAYYLKISDPMDLSIMEQKSKSQE 1636
Query: 430 YQSREDFLADVNQIVENSTLYNGPTS 507
Y+S ++FL D +I NS ++NG S
Sbjct: 1637 YKSIDEFLKDAEKIYTNSVVFNGAES 1662
>AC024791-14|AAF60658.1| 767|Caenorhabditis elegans P300/cbp
associated factor homologprotein 1 protein.
Length = 767
Score = 56.8 bits (131), Expect = 9e-09
Identities = 25/78 (32%), Positives = 47/78 (60%)
Frame = +1
Query: 265 TLSSLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSRE 444
+L S + +LK + + PF PV+ K V +YY + P+D +T+ + L++K Y +
Sbjct: 650 SLDSKIGAILKKLTADKNAWPFASPVDVKEVPEYYDHIKHPIDFKTMQEKLKRKAYTHQH 709
Query: 445 DFLADVNQIVENSTLYNG 498
F+AD+N++ +N ++NG
Sbjct: 710 LFIADLNRLFQNCYVFNG 727
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 322 QPFFFPVNP-KL-VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
Q F+ PV+P KL + DY +++ PMDLQTI L K Y E+F+ D+N +V+N YN
Sbjct: 577 QVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYN 636
Score = 48.0 bits (109), Expect = 4e-06
Identities = 29/78 (37%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 268 LSSLLEGVLKHMRHLPDVQPFFFPVNP-KL-VADYYRIVSRPMDLQTITDNLRQKHYQSR 441
L ++++ LKH +H PF PV+ KL + +Y+ IV+ PMDL+TI LR +Y
Sbjct: 291 LFTVVKDALKH-KHS---WPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCA 346
Query: 442 EDFLADVNQIVENSTLYN 495
ED + D+N + +N +N
Sbjct: 347 EDAIKDLNTLFDNCKKFN 364
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 55.2 bits (127), Expect = 3e-08
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +1
Query: 322 QPFFFPVNP-KL-VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
Q F+ PV+P KL + DY +++ PMDLQTI L K Y E+F+ D+N +V+N YN
Sbjct: 577 QVFYLPVDPIKLKIYDYLEVITNPMDLQTIKKKLDFKQYAEPEEFVHDINLMVDNCCKYN 636
Score = 51.2 bits (117), Expect = 4e-07
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
Frame = +1
Query: 268 LSSLLEGVLKHMRHLPDVQPFFFPVNP-KL-VADYYRIVSRPMDLQTITDNLRQKHYQSR 441
L ++++ LKH +H PF PV+ KL + +Y+ IV+ PMDL+TI LR +Y
Sbjct: 291 LFTVVKDALKH-KHS---WPFQLPVDAIKLEIPEYHNIVNTPMDLRTIEKRLRNLYYWCA 346
Query: 442 EDFLADVNQIVENSTLYNGP 501
ED + D+NQ+ N +N P
Sbjct: 347 EDAIKDINQVFINCYSFNPP 366
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 54.8 bits (126), Expect = 4e-08
Identities = 25/57 (43%), Positives = 34/57 (59%)
Frame = +1
Query: 325 PFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
PF PVNPKLV Y I+S+PMDL+TI + Y++ EDF D+ + N +N
Sbjct: 1283 PFLEPVNPKLVPGYKMIISKPMDLKTIRQKNEKLIYETPEDFAEDIELMFANCRQFN 1339
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 54.4 bits (125), Expect = 5e-08
Identities = 26/80 (32%), Positives = 43/80 (53%)
Frame = +1
Query: 274 SLLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFL 453
+L+E +LK PF PV+ K V DYY ++ RPM+L+T+ + ++Q+ Y +
Sbjct: 1327 TLIETLLKEAMRQECSWPFLQPVDSKEVPDYYDVIKRPMNLRTMMNKIKQRIYNKPIEVR 1386
Query: 454 ADVNQIVENSTLYNGPTSSL 513
D I+ N YN P + +
Sbjct: 1387 NDFQLILSNCETYNEPENEI 1406
>Z71258-13|CAN86573.1| 582|Caenorhabditis elegans Hypothetical
protein C01H6.7b protein.
Length = 582
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +1
Query: 289 VLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQ 468
+L+ + Q F FPV P + DY I+ PMDLQTI +N+ Y S D
Sbjct: 159 ILRKLVEKDPEQYFAFPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYASLPAMKEDCEL 218
Query: 469 IVENSTLYNGPTS 507
IV N+ YN P +
Sbjct: 219 IVSNAFQYNQPNT 231
>Z71258-6|CAA95779.1| 636|Caenorhabditis elegans Hypothetical
protein C01H6.7 protein.
Length = 636
Score = 54.0 bits (124), Expect = 6e-08
Identities = 27/73 (36%), Positives = 36/73 (49%)
Frame = +1
Query: 289 VLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQ 468
+L+ + Q F FPV P + DY I+ PMDLQTI +N+ Y S D
Sbjct: 159 ILRKLVEKDPEQYFAFPVTPSMAPDYRDIIKTPMDLQTIRENIEDGKYASLPAMKEDCEL 218
Query: 469 IVENSTLYNGPTS 507
IV N+ YN P +
Sbjct: 219 IVSNAFQYNQPNT 231
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
R10E11.1b protein.
Length = 2056
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 DVQPFFFPVNPKL--VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTL 489
D PF PV+ KL + DY+ I+ RPMDL+T+ L YQ+ F D+ +++N+ L
Sbjct: 885 DAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWL 944
Query: 490 YNGPTSSL 513
YN S +
Sbjct: 945 YNRKNSKV 952
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
R10E11.1a protein.
Length = 2045
Score = 53.2 bits (122), Expect = 1e-07
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Frame = +1
Query: 316 DVQPFFFPVNPKL--VADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTL 489
D PF PV+ KL + DY+ I+ RPMDL+T+ L YQ+ F D+ +++N+ L
Sbjct: 874 DAAPFRVPVDAKLLNIPDYHEIIKRPMDLETVHKKLYAGQYQNAGQFCDDIWLMLDNAWL 933
Query: 490 YNGPTSSL 513
YN S +
Sbjct: 934 YNRKNSKV 941
>Z81515-10|CAH60782.1| 413|Caenorhabditis elegans Hypothetical
protein F26H11.2g protein.
Length = 413
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
LLE +L+H P F PV+ DY + + +PMDL TIT + + Y F+
Sbjct: 261 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 316
Query: 457 DVNQIVENSTLYN 495
DVNQ+ EN+ YN
Sbjct: 317 DVNQMFENAKTYN 329
>Z81515-9|CAH04722.1| 2266|Caenorhabditis elegans Hypothetical protein
F26H11.2c protein.
Length = 2266
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
LLE +L+H P F PV+ DY + + +PMDL TIT + + Y F+
Sbjct: 2114 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 2169
Query: 457 DVNQIVENSTLYN 495
DVNQ+ EN+ YN
Sbjct: 2170 DVNQMFENAKTYN 2182
>Z81515-8|CAB54234.3| 692|Caenorhabditis elegans Hypothetical
protein F26H11.2d protein.
Length = 692
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
LLE +L+H P F PV+ DY + + +PMDL TIT + + Y F+
Sbjct: 540 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 595
Query: 457 DVNQIVENSTLYN 495
DVNQ+ EN+ YN
Sbjct: 596 DVNQMFENAKTYN 608
>Z81515-7|CAB04195.1| 510|Caenorhabditis elegans Hypothetical
protein F26H11.2f protein.
Length = 510
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
LLE +L+H P F PV+ DY + + +PMDL TIT + + Y F+
Sbjct: 358 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 413
Query: 457 DVNQIVENSTLYN 495
DVNQ+ EN+ YN
Sbjct: 414 DVNQMFENAKTYN 426
>Z81515-6|CAB04198.1| 405|Caenorhabditis elegans Hypothetical
protein F26H11.2e protein.
Length = 405
Score = 51.2 bits (117), Expect = 4e-07
Identities = 28/73 (38%), Positives = 39/73 (53%)
Frame = +1
Query: 277 LLEGVLKHMRHLPDVQPFFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLA 456
LLE +L+H P F PV+ DY + + +PMDL TIT + + Y F+
Sbjct: 253 LLELLLEHRMSTP----FRNPVDLNEFPDYEKFIKKPMDLSTITKKVERTEYLYLSQFVN 308
Query: 457 DVNQIVENSTLYN 495
DVNQ+ EN+ YN
Sbjct: 309 DVNQMFENAKTYN 321
>Z68751-8|CAA92978.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +1
Query: 238 ERRRTDPLVT--LSSLLEGVLKHMRHLPDVQPFFFPVNP--KLVADYYRIVSRPMDLQTI 405
++++TDP + ++ +L+ +L++ ++ F P K + DYY+++S+PMD I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 406 TDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSLTV 519
+ Y E+ D+N +V N+ YN S + V
Sbjct: 1234 NKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYV 1271
>Z68341-5|CAA92768.1| 1474|Caenorhabditis elegans Hypothetical protein
F01G4.1 protein.
Length = 1474
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +1
Query: 238 ERRRTDPLVT--LSSLLEGVLKHMRHLPDVQPFFFPVNP--KLVADYYRIVSRPMDLQTI 405
++++TDP + ++ +L+ +L++ ++ F P K + DYY+++S+PMD I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 406 TDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSLTV 519
+ Y E+ D+N +V N+ YN S + V
Sbjct: 1234 NKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYV 1271
>AF230280-1|AAG16655.1| 1474|Caenorhabditis elegans SWI2/SNF2-like
protein protein.
Length = 1474
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Frame = +1
Query: 238 ERRRTDPLVT--LSSLLEGVLKHMRHLPDVQPFFFPVNP--KLVADYYRIVSRPMDLQTI 405
++++TDP + ++ +L+ +L++ ++ F P K + DYY+++S+PMD I
Sbjct: 1174 KKKKTDPELAEKINEMLDVILEYKNEDGELIADVFQTLPTRKELPDYYQVISKPMDFDRI 1233
Query: 406 TDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSLTV 519
+ Y E+ D+N +V N+ YN S + V
Sbjct: 1234 NKKIETGRYTVMEELNDDMNLLVNNAQTYNEEGSEIYV 1271
>AC006712-6|AAO21405.1| 765|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform b protein.
Length = 765
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 268 LSSLLEGVLKHMRHLPDVQPFFFPVNPKLVAD--YYRIVSRPMDLQTITDNLRQKHYQSR 441
L ++ VLK V PF PV+ + Y+ V+RPMDL+TI + L+ +Y
Sbjct: 44 LDYIMTTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCA 103
Query: 442 EDFLADVNQIVENSTLYNGPTSSLTV 519
++ + D+ + +N +NG +T+
Sbjct: 104 QECIDDIETVFQNCYTFNGKEDDVTI 129
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 325 PFFFPVNPKLVA--DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
PF PV+ + + DY++I+ PMDL+++ + Y+ DF DV ++ N LYN
Sbjct: 284 PFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYN 342
>AC006712-5|AAK39326.2| 851|Caenorhabditis elegans Temporarily
assigned gene nameprotein 332, isoform a protein.
Length = 851
Score = 46.8 bits (106), Expect = 9e-06
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Frame = +1
Query: 268 LSSLLEGVLKHMRHLPDVQPFFFPVNPKLVAD--YYRIVSRPMDLQTITDNLRQKHYQSR 441
L ++ VLK V PF PV+ + Y+ V+RPMDL+TI + L+ +Y
Sbjct: 44 LDYIMTTVLKEAGKHKHVWPFQKPVDAVALCIPLYHERVARPMDLKTIENRLKSTYYTCA 103
Query: 442 EDFLADVNQIVENSTLYNGPTSSLTV 519
++ + D+ + +N +NG +T+
Sbjct: 104 QECIDDIETVFQNCYTFNGKEDDVTI 129
Score = 41.1 bits (92), Expect = 5e-04
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +1
Query: 325 PFFFPVNPKLVA--DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
PF PV+ + + DY++I+ PMDL+++ + Y+ DF DV ++ N LYN
Sbjct: 284 PFNEPVDAEQLGLHDYHKIIKEPMDLKSMKAKMESGAYKEPSDFEHDVRLMLRNCFLYN 342
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 890 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 949
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 937 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 996
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 998
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 890 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 949
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical protein
F11A10.1b protein.
Length = 1289
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 937 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 996
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical protein
F11A10.1a protein.
Length = 1291
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 998
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expression
abnormal protein protein.
Length = 1291
Score = 43.6 bits (98), Expect = 9e-05
Identities = 21/60 (35%), Positives = 31/60 (51%)
Frame = +1
Query: 328 FFFPVNPKLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTS 507
F PV+P DYY I+ P+ +Q I + L Y + F+AD+ I N+ YN T+
Sbjct: 939 FVEPVDPDEAEDYYEIIETPICMQDIMEKLNNCEYNHADKFVADLILIQTNALEYNPSTT 998
>AF077531-1|AAC64610.1| 374|Caenorhabditis elegans Hypothetical
protein F13C5.2 protein.
Length = 374
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = +1
Query: 325 PFFFPVNPKLVA--DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYN 495
PF PV+ L+ DY+ ++ +PMD+ TI L + Y + +F D ++ N YN
Sbjct: 140 PFRKPVDVVLLGLTDYHEVIKKPMDMSTIRKKLIGEEYDTAVEFKEDFKLMINNCLTYN 198
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.9 bits (74), Expect = 0.070
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 364 YYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSL 513
YY +++P+DL+TI N K Y + ++ D+ + +N+ ++G S +
Sbjct: 230 YYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNGSDI 279
Score = 33.5 bits (73), Expect = 0.093
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 364 YYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSL 513
YY ++ +PMD+ I L + Y + D ++D ++ N+ +N S +
Sbjct: 749 YYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDSDI 798
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 349 KLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSL 513
K +YY+I+ P+D++TI + Y + + D + N+ +N P S +
Sbjct: 567 KQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRSMI 621
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLY 492
+YY V P+D+ TI L+ Y + + F D ++N+ Y
Sbjct: 80 EYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTY 123
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 33.9 bits (74), Expect = 0.070
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 364 YYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSL 513
YY +++P+DL+TI N K Y + ++ D+ + +N+ ++G S +
Sbjct: 230 YYEKIAKPIDLKTIAQNGVNKKYSTMKELKDDLFLLFKNAQQFSGNGSDI 279
Score = 33.5 bits (73), Expect = 0.093
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 364 YYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSL 513
YY ++ +PMD+ I L + Y + D ++D ++ N+ +N S +
Sbjct: 749 YYDVIKKPMDMMRIKHKLENRQYVTLLDVVSDFMLMLSNACKFNETDSDI 798
Score = 32.3 bits (70), Expect = 0.21
Identities = 14/55 (25%), Positives = 27/55 (49%)
Frame = +1
Query: 349 KLVADYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLYNGPTSSL 513
K +YY+I+ P+D++TI + Y + + D + N+ +N P S +
Sbjct: 567 KQYPEYYQIIQNPIDMKTIRMRIDGHQYPQVDAMINDCRVMFSNARDFNEPRSMI 621
Score = 30.7 bits (66), Expect = 0.65
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 361 DYYRIVSRPMDLQTITDNLRQKHYQSREDFLADVNQIVENSTLY 492
+YY V P+D+ TI L+ Y + + F D ++N+ Y
Sbjct: 80 EYYEQVKEPIDVTTIQHKLKIPEYLTYDQFNDDFMMFIKNNLTY 123
>U41034-2|AAA82379.1| 915|Caenorhabditis elegans Hypothetical
protein M02D8.3 protein.
Length = 915
Score = 29.9 bits (64), Expect = 1.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 230 DPPSA-GVPTLSSLSPPYWRASSNTCAICPTCNRSSFPSTLSWSRI 364
D PSA VPT S P + ++CP NRS P T +++
Sbjct: 297 DMPSALPVPTAQSSKSPKESSKEPPKSLCPAINRSDLPQTPQLAKV 342
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/50 (36%), Positives = 26/50 (52%)
Frame = -1
Query: 285 LQ*GGESDERVGTPALGGSPY*VLAGVSAGTASFSTT*RAYLATPRPAPT 136
LQ G +++G PA G+P V+ V G + S A L+ RP+PT
Sbjct: 234 LQPGSSVIQQIGQPAPSGTPQPVIQAVQQGPSLLS----ALLSQRRPSPT 279
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 230 DPPSAGVPTLSSLSPPYWRASSNTCAICPTCNRSSFPSTLSWSRIT 367
+P S + TLS +SPP +SS+T C R+ W+ I+
Sbjct: 29 NPSSHALRTLSPVSPPTANSSSSTSRSCSPVVRAETIVAGKWTHIS 74
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 230 DPPSAGVPTLSSLSPPYWRASSNTCAICPTCNRSSFPSTLSWSRIT 367
+P S + TLS +SPP +SS+T C R+ W+ I+
Sbjct: 29 NPSSHALRTLSPVSPPTANSSSSTSRSCSPVVRAETIVAGKWTHIS 74
>U64862-2|AAZ32793.1| 372|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform e protein.
Length = 372
Score = 28.3 bits (60), Expect = 3.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +2
Query: 230 DPPSAGVPTLSSLSPPYWRASSNTCAICPTCNRSSFPSTLSWSRIT 367
+P S + TLS +SPP +SS+T C R+ W+ I+
Sbjct: 29 NPSSHALRTLSPVSPPTANSSSSTSRSCSPVVRAETIVAGKWTHIS 74
>Z96102-6|CAJ85756.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 483 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 518
>Z96102-5|CAB54262.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 517 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 552
>Z96102-4|CAB54263.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 613 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 648
>Z81027-7|CAJ85745.1| 1062|Caenorhabditis elegans Hypothetical
protein H39E23.1c protein.
Length = 1062
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 483 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 518
>Z81027-6|CAB54178.2| 1096|Caenorhabditis elegans Hypothetical
protein H39E23.1b protein.
Length = 1096
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 517 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 552
>Z81027-5|CAB54179.1| 1192|Caenorhabditis elegans Hypothetical
protein H39E23.1a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 613 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 648
>U40858-1|AAA83272.1| 1096|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1096
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 517 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 552
>U22183-1|AAA97437.1| 1192|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 1192
Score = 27.5 bits (58), Expect = 6.1
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Frame = +2
Query: 236 PSAGVPTLSSLSPPYWRASSNTCAIC---PTCNRSS 334
P++ T+S L PP ++ SSNT I P NR+S
Sbjct: 613 PTSRQATISLLQPPSYKPSSNTTQIAQIPPLFNRNS 648
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.395
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,215,742
Number of Sequences: 27780
Number of extensions: 200588
Number of successful extensions: 765
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 765
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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