Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_J02
(573 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismuta... 165 7e-43
AY745232-1|AAU93511.1| 75|Anopheles gambiae SOD3A protein. 105 1e-24
AY745233-1|AAU93512.1| 100|Anopheles gambiae SOD3B protein. 97 4e-22
AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translati... 24 4.0
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 5.3
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi... 23 7.1
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 23 9.3
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 23 9.3
AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant r... 23 9.3
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 23 9.3
>AY524130-1|AAS17758.1| 211|Anopheles gambiae superoxide dismutase
2 protein.
Length = 211
Score = 165 bits (402), Expect = 7e-43
Identities = 77/152 (50%), Positives = 98/152 (64%), Gaps = 2/152 (1%)
Frame = +2
Query: 74 PAKAVCVLHGD--VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 247
P KA+ L G VSG V Q + PV + V GL+ GKHGFH+HE GD T+GC S
Sbjct: 20 PRKAIVYLQGTSGVSGNVTISQPSCTEPVFIDINVVGLTPGKHGFHIHEKGDLTDGCAST 79
Query: 248 GAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVV 427
G H+NP K HGAP+ RH+GDLGNI A+ + G+ K D+ +SL G S++GR +V+
Sbjct: 80 GGHYNPDKVSHGAPNDQVRHVGDLGNI-AADENGIAKTSYSDTVVSLYGARSVIGRAIVI 138
Query: 428 HADPDDLGLGGHELSKSTGNAGARIACGVIGL 523
HA+ DDLG H S TGNAG R+ACGVIG+
Sbjct: 139 HAEVDDLGKTNHPDSLKTGNAGGRVACGVIGI 170
>AY745232-1|AAU93511.1| 75|Anopheles gambiae SOD3A protein.
Length = 75
Score = 105 bits (252), Expect = 1e-24
Identities = 50/76 (65%), Positives = 62/76 (81%)
Frame = +2
Query: 305 HIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDDLGLGGHELSKSTG 484
H GD+GNI A + G KV + +QI+L G ++VGR+LVVHADPDDLG+GGHELSK+TG
Sbjct: 1 HAGDMGNIVAD-ENGEAKVDLTATQIALSGALNVVGRSLVVHADPDDLGVGGHELSKTTG 59
Query: 485 NAGARIACGVIGLAKI 532
+AGAR+ACGVIGL KI
Sbjct: 60 DAGARLACGVIGLCKI 75
>AY745233-1|AAU93512.1| 100|Anopheles gambiae SOD3B protein.
Length = 100
Score = 97.1 bits (231), Expect = 4e-22
Identities = 46/91 (50%), Positives = 63/91 (69%)
Frame = +2
Query: 257 FNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHAD 436
+NP +HGAPD H+GDLGNI A S G + K+ I + +++LVG SI+GRTL +
Sbjct: 1 YNPDGNDHGAPDDANCHVGDLGNIVAYSTG-LAKIQIANKKLTLVGDRSIIGRTLSISEY 59
Query: 437 PDDLGLGGHELSKSTGNAGARIACGVIGLAK 529
DDLG G H+ SK+TGN+G IAC +IG+A+
Sbjct: 60 EDDLGRGKHDYSKTTGNSGNCIACAIIGVAR 90
>AJ439060-9|CAD27760.1| 348|Anopheles gambiae putative translation
initiation factor protein.
Length = 348
Score = 23.8 bits (49), Expect = 4.0
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = -3
Query: 520 SDDTAGNTGSSIACRLAQFVTSKSEIIRIRMDYQSASNNAVGSN 389
+DD G S +A K E I ++ + N A+G N
Sbjct: 99 ADDVKGQVESLLANETVTVDGMKQEAIEYMLEKDISDNRAIGDN 142
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.4 bits (48), Expect = 5.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -2
Query: 350 HHHHWKLQYFLGLQCDEYPNQVHHAPALVG*SELQQRC 237
H HH Q+ + N HH P+L+ S ++ C
Sbjct: 647 HQHHQAHQHQGQHHAQHHSNGTHHGPSLM--SSARESC 682
>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
channel alpha subunitprotein.
Length = 2139
Score = 23.0 bits (47), Expect = 7.1
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = -2
Query: 416 CVQQCCWVQLTRSE 375
CV CCWV L E
Sbjct: 786 CVWDCCWVWLKFQE 799
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 22.6 bits (46), Expect = 9.3
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -2
Query: 236 NRWYCHQTHVHGNRACPY 183
NRW+ +H CPY
Sbjct: 538 NRWHHFHSHTPQRSLCPY 555
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 22.6 bits (46), Expect = 9.3
Identities = 7/18 (38%), Positives = 9/18 (50%)
Frame = -2
Query: 236 NRWYCHQTHVHGNRACPY 183
NRW+ +H CPY
Sbjct: 514 NRWHHFHSHTPQRSLCPY 531
>AY062432-1|AAL47188.1| 391|Anopheles gambiae putative odorant
receptor Or5 protein.
Length = 391
Score = 22.6 bits (46), Expect = 9.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = -3
Query: 307 VTSIRIRCTMLLL*WVEVSSSRGATVGIVTKLMYMET 197
+ + I C+++L V S++ A VG++ L+ +ET
Sbjct: 272 IQCVMIWCSLVLYVAVTGLSTKAANVGVLFILLTVET 308
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 22.6 bits (46), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +2
Query: 218 GDNTNGCTSAG 250
G TNGCT AG
Sbjct: 190 GGGTNGCTKAG 200
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,877
Number of Sequences: 2352
Number of extensions: 13489
Number of successful extensions: 56
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 53
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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