Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_I14
(512 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0108 - 12628711-12629178 86 1e-17
05_01_0438 + 3475017-3475484 86 2e-17
10_08_0470 - 18151326-18151769 58 5e-09
09_06_0335 + 22391378-22391480,22391580-22391769,22392747-223928... 52 3e-07
09_04_0554 + 18495073-18495175,18495794-18496032 52 3e-07
09_04_0354 + 16919133-16919235,16920145-16920355,16920478-169205... 52 3e-07
09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028 52 3e-07
07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710 52 3e-07
06_03_1149 + 28018932-28020529,28020989-28021067 52 3e-07
06_03_1097 - 27570037-27570262,27570575-27570730,27570763-275708... 52 3e-07
06_03_0944 + 26202053-26202229,26203788-26204047,26204145-262042... 52 3e-07
04_04_1238 + 31997671-31998816 52 3e-07
03_02_0429 + 8378819-8378921,8379098-8379282,8380054-8380120,838... 52 3e-07
03_02_0281 - 7069847-7069876,7070152-7070218,7071320-7071445,707... 52 3e-07
02_01_0464 - 3340642-3342015,3342403-3342405 52 3e-07
01_06_0033 + 25765300-25765758 52 3e-07
01_06_0031 + 25760878-25761342 52 3e-07
09_04_0556 + 18500324-18500426,18501501-18501697,18501826-185018... 51 6e-07
08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754 50 8e-07
05_03_0115 - 8544590-8544958,8545408-8545503,8561954-8562505,857... 50 8e-07
05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198 49 3e-06
08_01_0566 - 5028512-5029150 38 0.004
08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137 35 0.033
07_03_0447 + 18301421-18301520,18301900-18302060 35 0.044
10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364 31 0.41
07_03_1089 - 23879483-23881909 29 2.9
07_03_1637 + 28293033-28293779,28294652-28295233,28295650-282958... 27 6.7
06_03_0447 + 20878444-20878821 27 8.8
>01_03_0108 - 12628711-12629178
Length = 155
Score = 86.2 bits (204), Expect = 1e-17
Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRYY 332
GKQLEDGRTL+DYNIQKESTLHLV K Y+ P KLAVL++Y
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKQKHKHKKVKLAVLQFY 106
Query: 331 KVDE-NGKIHRLRRECTGEQCGA 266
KVD+ GK+ RLR+EC +CGA
Sbjct: 107 KVDDATGKVTRLRKECPNAECGA 129
Score = 34.3 bits (75), Expect = 0.058
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 264 GVFMAVMEDRHYCGKCHSTMVF 199
G FMA DRHYCGKC T V+
Sbjct: 130 GTFMANHFDRHYCGKCGLTYVY 151
>05_01_0438 + 3475017-3475484
Length = 155
Score = 85.8 bits (203), Expect = 2e-17
Identities = 45/83 (54%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRYY 332
GKQLEDGRTL+DYNIQKESTLHLV K Y+ P KLAVL++Y
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFY 106
Query: 331 KVDE-NGKIHRLRRECTGEQCGA 266
KVD+ GK+ RLR+EC CGA
Sbjct: 107 KVDDATGKVTRLRKECPNNDCGA 129
Score = 34.3 bits (75), Expect = 0.058
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = -3
Query: 264 GVFMAVMEDRHYCGKCHSTMVF 199
G FMA DRHYCGKC T V+
Sbjct: 130 GTFMANHFDRHYCGKCGLTYVY 151
>10_08_0470 - 18151326-18151769
Length = 147
Score = 57.6 bits (133), Expect = 5e-09
Identities = 35/84 (41%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHL---VXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVL 341
G QL+DG TL Y IQ+ESTLHL + K Y+TP +LAVL
Sbjct: 52 GHQLDDGHTLIYYGIQEESTLHLLGRICGGGGGNKKRKKKAYATPKKGKHEHRKEELAVL 111
Query: 340 RYYKVDE-NGKIHRLRRECTGEQC 272
R+Y+VD+ GK+ RLR C +C
Sbjct: 112 RHYRVDDVMGKVERLRLMCPNPEC 135
>09_06_0335 +
22391378-22391480,22391580-22391769,22392747-22392813,
22393177-22393206
Length = 129
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0554 + 18495073-18495175,18495794-18496032
Length = 113
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0354 +
16919133-16919235,16920145-16920355,16920478-16920544,
16920767-16920808
Length = 140
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>09_04_0148 + 15106392-15106484,15107517-15107776,15107920-15108028
Length = 153
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
Score = 34.3 bits (75), Expect = 0.058
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQL D +T DYNI+ S LHLV
Sbjct: 123 GKQLADDKTAKDYNIEGGSVLHLV 146
>07_03_0427 - 18080959-18081079,18081203-18081410,18081608-18081710
Length = 143
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>06_03_1149 + 28018932-28020529,28020989-28021067
Length = 558
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLV 146
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLV 222
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLV 298
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLV 374
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 427 GKQLEDGRTLADYNIQKESTLHLV 450
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 503 GKQLEDGRTLADYNIQKESTLHLV 526
>06_03_1097 -
27570037-27570262,27570575-27570730,27570763-27570881,
27572154-27572236,27574991-27575041,27575218-27575674,
27576139-27576228,27576672-27576701
Length = 403
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 87 GKQLEDGRTLADYNIQKESTLHLV 110
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2
Query: 508 KQLEDGRTLSDYNIQKESTLHLV 440
KQLEDGRTL+DYNIQKESTLHLV
Sbjct: 164 KQLEDGRTLADYNIQKESTLHLV 186
>06_03_0944 +
26202053-26202229,26203788-26204047,26204145-26204245,
26204512-26204584,26205482-26205581
Length = 236
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 75 GKQLEDGRTLADYNIQKESTLHLV 98
Score = 34.3 bits (75), Expect = 0.058
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQL D +T DYNI+ S LHLV
Sbjct: 151 GKQLADDKTAKDYNIEGGSVLHLV 174
>04_04_1238 + 31997671-31998816
Length = 381
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 123 GKQLEDGRTLADYNIQKESTLHLV 146
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 199 GKQLEDGRTLADYNIQKESTLHLV 222
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 275 GKQLEDGRTLADYNIQKESTLHLV 298
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 351 GKQLEDGRTLADYNIQKESTLHLV 374
>03_02_0429 +
8378819-8378921,8379098-8379282,8380054-8380120,
8380516-8380544,8380739-8380774
Length = 139
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>03_02_0281 -
7069847-7069876,7070152-7070218,7071320-7071445,
7071727-7071916,7072008-7072110
Length = 171
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>02_01_0464 - 3340642-3342015,3342403-3342405
Length = 458
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 48 GKQLEDGRTLADYNIQKESTLHLV 71
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 124 GKQLEDGRTLADYNIQKESTLHLV 147
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 200 GKQLEDGRTLADYNIQKESTLHLV 223
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 276 GKQLEDGRTLADYNIQKESTLHLV 299
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 352 GKQLEDGRTLADYNIQKESTLHLV 375
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 428 GKQLEDGRTLADYNIQKESTLHLV 451
>01_06_0033 + 25765300-25765758
Length = 152
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
>01_06_0031 + 25760878-25761342
Length = 154
Score = 52.0 bits (119), Expect = 3e-07
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLEDGRTLADYNIQKESTLHLV 70
Score = 31.9 bits (69), Expect = 0.31
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQL D +T DY I+ S LHLV
Sbjct: 123 GKQLADDKTAHDYKIEAGSVLHLV 146
>09_04_0556 +
18500324-18500426,18501501-18501697,18501826-18501892,
18502300-18502370
Length = 145
Score = 50.8 bits (116), Expect = 6e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 47 GKQLDDGRTLADYNIQKESTLHLV 70
>08_01_0570 - 5073138-5073410,5075386-5075530,5075561-5075754
Length = 203
Score = 50.4 bits (115), Expect = 8e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLE+GRTL+DYNIQKESTLHLV
Sbjct: 160 GKQLEEGRTLADYNIQKESTLHLV 183
>05_03_0115 -
8544590-8544958,8545408-8545503,8561954-8562505,
8576247-8576312,8576623-8576694,8576967-8577082,
8577743-8577838,8578498-8578765
Length = 544
Score = 50.4 bits (115), Expect = 8e-07
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQL+DGRTL+DYNIQKESTLHLV
Sbjct: 438 GKQLKDGRTLADYNIQKESTLHLV 461
Score = 47.6 bits (108), Expect = 6e-06
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHL 443
GKQLEDGRTL+ YNIQKESTLHL
Sbjct: 514 GKQLEDGRTLAGYNIQKESTLHL 536
>05_05_0090 - 22310424-22310489,22310768-22310871,22312048-22312198
Length = 106
Score = 48.8 bits (111), Expect = 3e-06
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHLV 440
GKQLEDG TL+DYNIQKESTLHLV
Sbjct: 63 GKQLEDGCTLADYNIQKESTLHLV 86
>08_01_0566 - 5028512-5029150
Length = 212
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/23 (65%), Positives = 20/23 (86%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHL 443
G+ LEDGRTL++Y I+KE+ LHL
Sbjct: 47 GRHLEDGRTLAEYGIKKEANLHL 69
>08_01_0571 - 5088060-5088314,5088826-5088868,5088911-5089137
Length = 174
Score = 35.1 bits (77), Expect = 0.033
Identities = 17/24 (70%), Positives = 20/24 (83%), Gaps = 1/24 (4%)
Frame = -2
Query: 508 KQLEDG-RTLSDYNIQKESTLHLV 440
KQL+DG TL+DY+I ESTLHLV
Sbjct: 142 KQLDDGGSTLADYDIHDESTLHLV 165
>07_03_0447 + 18301421-18301520,18301900-18302060
Length = 86
Score = 34.7 bits (76), Expect = 0.044
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHL 443
G+QL+D RTL+DY IQ E TL L
Sbjct: 46 GRQLDDRRTLADYGIQTEHTLRL 68
>10_08_0467 - 18143358-18143540,18144520-18144597,18144624-18145364
Length = 333
Score = 31.5 bits (68), Expect = 0.41
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = -2
Query: 511 GKQLEDGRTLSDYNIQKESTLHL 443
G +L D RTL+ Y I++ESTL+L
Sbjct: 224 GMELADDRTLASYGIEEESTLYL 246
>07_03_1089 - 23879483-23881909
Length = 808
Score = 28.7 bits (61), Expect = 2.9
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 267 PGVFMAVMEDRHYCGKCHSTMVF 199
PG + V+++ CG CH+ M+F
Sbjct: 755 PGATVTVLKNLRICGDCHTAMMF 777
>07_03_1637 +
28293033-28293779,28294652-28295233,28295650-28295863,
28295894-28295911,28295983-28296118,28296203-28296281
Length = 591
Score = 27.5 bits (58), Expect = 6.7
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 216 GTCRSSAGPPSRP*TLLAPHCSPVHSRRSRWILPFS 323
G C S GPP P P + + R RW+ F+
Sbjct: 362 GACAVSRGPPGSPFAFACPGVNDGNLRVERWVGGFT 397
>06_03_0447 + 20878444-20878821
Length = 125
Score = 27.1 bits (57), Expect = 8.8
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 207 SYCGTCRSSAGPPSRP*TLLAPHCSPVHSR 296
SY +CR+SAG + ++LAP P+ R
Sbjct: 89 SYRRSCRASAGAKATATSILAPQTPPLRHR 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,071,974
Number of Sequences: 37544
Number of extensions: 158722
Number of successful extensions: 456
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 450
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -