Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_I13
(531 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 283 4e-77
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 283 4e-77
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 283 4e-77
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 283 4e-77
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 283 4e-77
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 283 4e-77
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 283 7e-77
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 283 7e-77
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 283 7e-77
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 277 5e-75
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 271 2e-73
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 146 1e-35
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 125 2e-29
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 118 3e-27
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 92 3e-19
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 76 2e-14
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 76 2e-14
U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical pr... 48 6e-06
Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical pr... 29 1.6
U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 28 3.6
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 28 3.6
AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical ... 27 6.3
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical pr... 27 8.4
U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical pr... 27 8.4
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 27 8.4
AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical... 27 8.4
AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical ... 27 8.4
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 27 8.4
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 27 8.4
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 27 8.4
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 27 8.4
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 27 8.4
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 283 bits (695), Expect = 4e-77
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 283 bits (695), Expect = 4e-77
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 283 bits (695), Expect = 4e-77
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 283 bits (695), Expect = 4e-77
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 198 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 257
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 258 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 317
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 318 EYDESGPSIVHRKCF 332
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 283 bits (695), Expect = 4e-77
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 228 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 287
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 288 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 347
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 348 EYDESGPSIVHRKCF 362
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 283 bits (695), Expect = 4e-77
Identities = 130/135 (96%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEALFQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 283 bits (693), Expect = 7e-77
Identities = 129/135 (95%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 283 bits (693), Expect = 7e-77
Identities = 129/135 (95%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 283 bits (693), Expect = 7e-77
Identities = 129/135 (95%), Positives = 134/135 (99%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 361
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 362 EYDESGPSIVHRKCF 376
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 277 bits (678), Expect = 5e-75
Identities = 128/135 (94%), Positives = 133/135 (98%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVIT+GNERFRCPEA+FQPSFLGME+ GIHET+YNSIMKCD+DIRKDLYANTVLS
Sbjct: 242 ELPDGQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLS 301
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGTTMYPGIADRMQKEITALAP TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 302 GGTTMYPGIADRMQKEITALAP-TMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 271 bits (665), Expect = 2e-73
Identities = 125/135 (92%), Positives = 129/135 (95%)
Frame = +1
Query: 13 ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
ELPDGQVITIGNERFRCPE LFQP+F+GME GIHETTY SIMKCDVDIRKDLYANTVLS
Sbjct: 241 ELPDGQVITIGNERFRCPEVLFQPAFIGMEGAGIHETTYQSIMKCDVDIRKDLYANTVLS 300
Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 372
GGT+M+PGIADRMQKEI LAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
Sbjct: 301 GGTSMFPGIADRMQKEIQHLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ 360
Query: 373 EYDESGPSIVHRKCF 417
EYDESGPSIVHRKCF
Sbjct: 361 EYDESGPSIVHRKCF 375
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 146 bits (353), Expect = 1e-35
Identities = 67/134 (50%), Positives = 90/134 (67%)
Frame = +1
Query: 16 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 195
LPD I I N FR PE LF+P +G E G+ SIMKCDVD+R+ LY+N VLSG
Sbjct: 241 LPDTTKIEISNSLFRAPEVLFKPDLIGTEWPGMAHVVNQSIMKCDVDLRQTLYSNIVLSG 300
Query: 196 GTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 375
GTT++ G DR+ E+ +AP+ KI+I A ER WIGGSI+ASL TF++MW+ K+E
Sbjct: 301 GTTLFKGFGDRLLGEMRKIAPADGKIRISASQERNSLTWIGGSIVASLDTFRKMWLGKKE 360
Query: 376 YDESGPSIVHRKCF 417
Y++ G S +H++ F
Sbjct: 361 YEDMGASAMHKRFF 374
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 125 bits (302), Expect = 2e-29
Identities = 63/138 (45%), Positives = 85/138 (61%), Gaps = 13/138 (9%)
Frame = +1
Query: 16 LPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSG 195
LPDG+VI +G ERF PE LFQP + +E G+ E + I D+D R D Y + VLSG
Sbjct: 246 LPDGRVIRLGGERFEAPEILFQPHLINVEKAGLSELLFGCIQASDIDTRLDFYKHIVLSG 305
Query: 196 GTTMYPGIADRMQKEITAL-----------APSTMKIKIIAPPERKYSVWIGGSILASL- 339
GTTMYPG+ R++KE+ L A KI+I APP RK+ V++GG++LA+L
Sbjct: 306 GTTMYPGLPSRLEKELKQLYLDRVLHGNTDAFQKFKIRIEAPPSRKHMVFLGGAVLANLM 365
Query: 340 -STFQQMWISKQEYDESG 390
Q W+SK+EY+E G
Sbjct: 366 KDRDQDFWVSKKEYEEGG 383
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 118 bits (284), Expect = 3e-27
Identities = 59/140 (42%), Positives = 80/140 (57%), Gaps = 8/140 (5%)
Frame = +1
Query: 19 PDGQVITIGNERFRCPEALFQPSFLGMEA-----CGIHETTYNSIMKCDVDIRKDLYANT 183
P+G G ER + PE LF +L E + + S D+DIR L++N
Sbjct: 296 PNGYTKEFGAERIKLPECLFDLGYLKAEGKKDGLMTVAQMAAASANLADIDIRPTLFSNV 355
Query: 184 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPP---ERKYSVWIGGSILASLSTFQQ 354
++GG ++ G +R+ + P T+K+++ A P ERKY WIGGSIL SL TFQQ
Sbjct: 356 TVTGGNSLILGFTERLNYALATKCPPTIKLRVFAAPTQAERKYGAWIGGSILGSLGTFQQ 415
Query: 355 MWISKQEYDESGPSIVHRKC 414
MW+SK EYDESG SIV +KC
Sbjct: 416 MWVSKAEYDESGKSIVEKKC 435
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 99.1 bits (236), Expect = 2e-21
Identities = 41/112 (36%), Positives = 73/112 (65%)
Frame = +1
Query: 40 IGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGI 219
I N RF C E LF+P G++ G+H+ + +I++C +D R+ LY N L+GG ++ PGI
Sbjct: 428 IDNSRFLCTEGLFKPKKWGLDTKGLHQLIHEAILQCPIDSRRTLYRNIYLAGGASLMPGI 487
Query: 220 ADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQE 375
A+++++E++ + P+T+ ++ P R + ++G I+AS STF+ IS Q+
Sbjct: 488 AEKLEQELSTVVPNTIHTQVNISPWRYNAAYLGAQIVASASTFEDSCISLQQ 539
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 91.9 bits (218), Expect = 3e-19
Identities = 51/139 (36%), Positives = 77/139 (55%), Gaps = 17/139 (12%)
Frame = +1
Query: 34 ITIGNERFRCPEALFQPSFLGME-ACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMY 210
+ +G ERF PE F P F E I +T I +C +D+R+ LY N VLSGG+TM+
Sbjct: 276 VDVGYERFLGPEIFFHPEFCNPEFTTPISDTIDTLIQQCPIDVRRGLYENIVLSGGSTMF 335
Query: 211 PGIADRMQKEITALA----------------PSTMKIKIIAPPERKYSVWIGGSILASLS 342
A ++Q+++ L+ P + +++I+ ++Y+VW GGS+LAS S
Sbjct: 336 KDFARKLQRDVKRLSDGRLQMSETLSGGRLKPKPIDVQVISHKMQRYAVWFGGSMLASTS 395
Query: 343 TFQQMWISKQEYDESGPSI 399
F Q+ +K EY E GPSI
Sbjct: 396 EFYQVSHTKAEYMERGPSI 414
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Frame = +1
Query: 34 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 213
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 214 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 384
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 385 SGPSIVHRKCF*ALCAS 435
G S+ F L S
Sbjct: 379 RGDSLEFSNFFQTLVQS 395
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 75.8 bits (178), Expect = 2e-14
Identities = 41/137 (29%), Positives = 73/137 (53%), Gaps = 3/137 (2%)
Frame = +1
Query: 34 ITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYP 213
I +G ERF PE LF PS + ++ CG+ E SI +C +R L N ++ GG++ +P
Sbjct: 263 IHLGVERFAIPEILFNPSDIDIDQCGVAEAVIESICQCPEALRPALAENIIVIGGSSCFP 322
Query: 214 GIADRMQKEITALAPSTMKIKI---IAPPERKYSVWIGGSILASLSTFQQMWISKQEYDE 384
G +R+++E+ ++ P+ + + + P+ W G L L+ + WI+++++DE
Sbjct: 323 GFRERLEREVRSMLPAEYGLNVSNDVINPQT--HSWHCGQEL--LTASKVPWINRKDWDE 378
Query: 385 SGPSIVHRKCF*ALCAS 435
G S+ F L S
Sbjct: 379 RGDSLEFSNFFQTLVQS 395
>U42436-1|AAF99891.1| 305|Caenorhabditis elegans Hypothetical
protein C49H3.8 protein.
Length = 305
Score = 47.6 bits (108), Expect = 6e-06
Identities = 28/91 (30%), Positives = 51/91 (56%), Gaps = 10/91 (10%)
Frame = +1
Query: 136 IMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITAL-APSTMKIKIIAP----PERK 300
+ KC +D+RK L+ N +L+GG + PG+ R+++EI + + KI +I E K
Sbjct: 198 VSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQFSEIK 257
Query: 301 ----YSVWIGGSILASL-STFQQMWISKQEY 378
+ W+G S+L SL T ++ ++ +E+
Sbjct: 258 NTPLFVSWLGASLLGSLRETIERKSLTLEEW 288
>Z37139-8|CAA85487.1| 376|Caenorhabditis elegans Hypothetical
protein C14B1.4 protein.
Length = 376
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = -2
Query: 467 RSTEPRAAGGSDAHSA*KHFLCTIEGPDSSYSCFEIHICWK 345
++ P AAG S + SA +CT+EG S S + C K
Sbjct: 60 QTPNPNAAGASASGSANYKLMCTLEGHTKSISSAKFSPCGK 100
>U50308-2|AAG24028.1| 791|Caenorhabditis elegans Hypothetical
protein F07C3.3 protein.
Length = 791
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/53 (37%), Positives = 26/53 (49%)
Frame = -1
Query: 159 DVNVTLHDGVVCRLVDATSFHTQERGLEESLWATEPFVSDCDDLTVGEFVASC 1
DV+ TLHD V RL D + + RG+ SL+ P C D+ V E C
Sbjct: 587 DVHKTLHDIVHMRLGDNKAKSDEGRGI--SLFDAIPNTRTCADVIVPENFCMC 637
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 28.3 bits (60), Expect = 3.6
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Frame = -1
Query: 273 DLHRGWSEGCD-----FLLHTVGNTRVHGGTTRQYCVGVQVFTD---VNVTLHDGVVCRL 118
DLH GWS D +L + + RV GG TR +GV++ D + T++D
Sbjct: 670 DLH-GWSMYVDGERSWYLHNETHHNRVLGGVTRGTVIGVRLDCDRGTMEYTVNDRKRIYQ 728
Query: 117 VDATSFHTQERGL 79
D+ +F RGL
Sbjct: 729 DDSMAFTNMPRGL 741
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 28.3 bits (60), Expect = 3.6
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -3
Query: 163 YGCQRHTS*WSCMSSRGCHKLPYPRTRAGREP 68
+ CQRH SC G H PY + R P
Sbjct: 423 WNCQRHAGFESCSCDDGYHLSPYDKKTCLRSP 454
>AL110500-5|CAB60428.1| 1050|Caenorhabditis elegans Hypothetical
protein Y87G2A.5 protein.
Length = 1050
Score = 27.5 bits (58), Expect = 6.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +3
Query: 189 VWWYHHVPWYCRPYAEGNHSP 251
+WW H +P Y +A+G P
Sbjct: 507 LWWGHRIPAYYISFADGREQP 527
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = -1
Query: 192 RQYCVGVQVFTDVNVTLHDGVVCRLVDATSFH 97
R C+ V++ D H GV+C SFH
Sbjct: 23 RLVCIKVRMLDDTVAVFHLGVICFFFCVVSFH 54
>U41540-7|AAM54182.1| 930|Caenorhabditis elegans Hypothetical
protein F35H12.2a protein.
Length = 930
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 243 HSPRSIHDEDQNHRATREEVFCMDRWIDPRLPLY--LPADVDLETGI*RVRPLDCAQEVL 416
HS + + D+N T VF ++ DPR+ ++ L + +T + +D +
Sbjct: 225 HSDLQLLEMDRNATGTDSAVFVIEANWDPRVHMFEVLNTETPRDTRVFMTVAIDVIVSEI 284
Query: 417 LSAVRIAASSSPRFGRSHDR 476
+R + + R H+R
Sbjct: 285 SEPIRFSMEAMSRVFHEHER 304
>U41540-6|AAM54183.1| 934|Caenorhabditis elegans Hypothetical
protein F35H12.2b protein.
Length = 934
Score = 27.1 bits (57), Expect = 8.4
Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +3
Query: 243 HSPRSIHDEDQNHRATREEVFCMDRWIDPRLPLY--LPADVDLETGI*RVRPLDCAQEVL 416
HS + + D+N T VF ++ DPR+ ++ L + +T + +D +
Sbjct: 225 HSDLQLLEMDRNATGTDSAVFVIEANWDPRVHMFEVLNTETPRDTRVFMTVAIDVIVSEI 284
Query: 417 LSAVRIAASSSPRFGRSHDR 476
+R + + R H+R
Sbjct: 285 SEPIRFSMEAMSRVFHEHER 304
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 7 GDELPDGQVITIGNERFRCPEALFQPSFLG 96
GDE+ DG+V +GN ++R FQ +G
Sbjct: 4248 GDEIKDGKVEDLGNGKYRLTIPDFQEKDVG 4277
>AL110484-22|CAB54414.2| 305|Caenorhabditis elegans Hypothetical
protein Y38E10A.22 protein.
Length = 305
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -2
Query: 338 REARIDPPIHTEYF--LSGGAMILIFIVDGARAVISFCIRSAIPGYMVVPPDNTVLAYKS 165
++A D P+ T Y L A + I+ + IS +RS +P Y+ N + A +
Sbjct: 26 QQAIADSPLFTAYMKLLKRQAELSPRILSALLSAISSIVRSHLPAYLKFQAKNGLTATEK 85
Query: 164 LRMST 150
L ST
Sbjct: 86 LIQST 90
>AL032654-9|CAA21720.1| 404|Caenorhabditis elegans Hypothetical
protein Y52B11A.9 protein.
Length = 404
Score = 27.1 bits (57), Expect = 8.4
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +1
Query: 292 ERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF*ALCASLPPAAR 453
+RK V G A +S F + K++ DE GPS RK S PAA+
Sbjct: 213 DRKLDVK-SGVASAKISIFDMPKVKKEDPDEPGPSQPSRKSGKKRSRSRSPAAK 265
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 7 GDELPDGQVITIGNERFRCPEALFQPSFLG 96
GDE+ DG+V +GN ++R FQ +G
Sbjct: 3608 GDEIKDGKVEDLGNGKYRLTIPDFQEKDVG 3637
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 7 GDELPDGQVITIGNERFRCPEALFQPSFLG 96
GDE+ DG+V +GN ++R FQ +G
Sbjct: 4248 GDEIKDGKVEDLGNGKYRLTIPDFQEKDVG 4277
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 7 GDELPDGQVITIGNERFRCPEALFQPSFLG 96
GDE+ DG+V +GN ++R FQ +G
Sbjct: 4248 GDEIKDGKVEDLGNGKYRLTIPDFQEKDVG 4277
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 7 GDELPDGQVITIGNERFRCPEALFQPSFLG 96
GDE+ DG+V +GN ++R FQ +G
Sbjct: 3608 GDEIKDGKVEDLGNGKYRLTIPDFQEKDVG 3637
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 27.1 bits (57), Expect = 8.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 7 GDELPDGQVITIGNERFRCPEALFQPSFLG 96
GDE+ DG+V +GN ++R FQ +G
Sbjct: 4248 GDEIKDGKVEDLGNGKYRLTIPDFQEKDVG 4277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,036,011
Number of Sequences: 27780
Number of extensions: 292747
Number of successful extensions: 848
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1049512662
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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