Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I13
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.             251   3e-69
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.37 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.48 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.9  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   5.9  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   5.9  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   7.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    21   7.9  

>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score =  251 bits (615), Expect = 3e-69
 Identities = 117/118 (99%), Positives = 118/118 (100%)
 Frame = +1

Query: 13  ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 192
           ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS
Sbjct: 16  ELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLS 75

Query: 193 GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 366
           GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE+KYSVWIGGSILASLSTFQQMWIS
Sbjct: 76  GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWIGGSILASLSTFQQMWIS 133


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.4 bits (53), Expect = 0.37
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = +2

Query: 236 RKSQPSLHPR*RSKSSRHQ 292
           ++SQP +HPR + ++ +HQ
Sbjct: 215 QQSQPGMHPRQQQQAQQHQ 233


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = +1

Query: 130 NSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSV 309
           N  +K D DI++  Y + V      MYP  +  M+K I+    +  KI I  P E K  +
Sbjct: 342 NKELKYD-DIKEMEYLDKVFKETLRMYPPASILMRKAISDYTFNDTKITI--PKEMK--I 396

Query: 310 WI 315
           WI
Sbjct: 397 WI 398


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = +1

Query: 79  QPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVL 189
           + +FLG+    +   +YN +   D  + KDL+   +L
Sbjct: 328 ETTFLGLIRLIVLNLSYNMLTHIDARMFKDLFFLQIL 364


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +3

Query: 192 WWYHHVPWYC 221
           WW H + W C
Sbjct: 526 WWSHVLGWLC 535


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 5/10 (50%), Positives = 6/10 (60%)
 Frame = +3

Query: 192 WWYHHVPWYC 221
           WW H + W C
Sbjct: 579 WWSHVLGWLC 588


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 346 FQQMWISKQEYDESGPSIVHRK 411
           F+Q W S Q Y +    +V R+
Sbjct: 151 FRQNWASLQPYKKLSVEVVRRE 172


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 113 MPQASIPKNEGWKRASGQRNLSFPIVMT 30
           + Q  IP +      +G+RN+  PIV +
Sbjct: 165 LKQVKIPHDIAINSTTGKRNVVTPIVQS 192


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,213
Number of Sequences: 438
Number of extensions: 3396
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)