Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_I12
(192 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 22 0.77
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 21 1.8
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 1.8
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 1.8
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 1.8
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 20 2.3
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 20 2.3
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 20 2.3
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 20 2.3
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 20 2.3
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 20 2.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 20 3.1
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 20 3.1
DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex det... 20 3.1
DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex det... 20 3.1
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 3.1
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 3.1
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 19 4.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 19 4.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 19 4.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 19 4.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 19 4.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 19 4.1
DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein. 19 4.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 19 4.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 19 4.1
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 19 7.1
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 0.77
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -1
Query: 192 EPKILSNTESRSISSAL*GRRHDINNRVTNN 100
EPKI+SN S S + ++ NN N
Sbjct: 78 EPKIISNNNSLSNNYNYNNNYNNYNNNYNTN 108
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = +2
Query: 11 RFKRTFHKISKLKD 52
R TFH++ KL+D
Sbjct: 37 RSNMTFHELKKLRD 50
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 94 LHIISNSIVDIMPPT 138
LH+ +V+I+PPT
Sbjct: 286 LHVFFLLVVEIIPPT 300
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 20.6 bits (41), Expect = 1.8
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +1
Query: 94 LHIISNSIVDIMPPT 138
LH+ +V+I+PPT
Sbjct: 286 LHVFFLLVVEIIPPT 300
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 20.6 bits (41), Expect = 1.8
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = -1
Query: 192 EPKILSNTESRSISSAL*GRRHDINNRVTN 103
EPKI+S+ +++I + ++ NN N
Sbjct: 311 EPKIISSLSNKTIHNNNNYNNNNYNNNYNN 340
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 20.2 bits (40), Expect = 2.3
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = +3
Query: 162 WIPCWKEF 185
WIP W++F
Sbjct: 422 WIPKWRQF 429
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 2.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 192 EPKILSNTESRSISSAL*GRRHDINNRVTNN 100
EPKI+S+ + S ++ NN NN
Sbjct: 78 EPKIISSLSNNYKYSNYNNYNNNYNNNYNNN 108
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 20.2 bits (40), Expect = 2.3
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = -1
Query: 192 EPKILSNTESRSISSAL*GRRHDINNRVTNN 100
EPKI+S+ + S ++ NN NN
Sbjct: 78 EPKIISSLSNNYKYSNYNNYNNNYNNNYNNN 108
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +3
Query: 12 ASNARFIKYQNLRIKHINQDKYKLLR 89
++N ++ Y N + N + YK L+
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +3
Query: 12 ASNARFIKYQNLRIKHINQDKYKLLR 89
++N ++ Y N + N + YK L+
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +3
Query: 12 ASNARFIKYQNLRIKHINQDKYKLLR 89
++N ++ Y N + N + YK L+
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 20.2 bits (40), Expect = 2.3
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +3
Query: 12 ASNARFIKYQNLRIKHINQDKYKLLR 89
++N ++ Y N + N + YK L+
Sbjct: 86 SNNYKYSNYNNYNNNNYNNNNYKKLQ 111
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.2 bits (40), Expect = 2.3
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 122 ISCLRPYNAEDIDLDSVLERIF 187
++ LR +NA LDS+ E +F
Sbjct: 260 LTVLRTFNASYNSLDSLPEGLF 281
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 192 EPKILSNTESRSISSAL*GRRHDINNRVTNN 100
EPKI+S+ + +I + +++ NN NN
Sbjct: 77 EPKIISSLSNNTIHNN--NYKYNYNNNNYNN 105
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 19.8 bits (39), Expect = 3.1
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = -1
Query: 192 EPKILSNTESRSISSAL*GRRHDINNRVTNN 100
EPKI+S+ + +I + +++ NN NN
Sbjct: 77 EPKIISSLSNNTIHNN--NYKYNYNNNNYNN 105
>DQ325075-1|ABD14089.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325074-1|ABD14088.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325073-1|ABD14087.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325072-1|ABD14086.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325071-1|ABD14085.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325070-1|ABD14084.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325069-1|ABD14083.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>DQ325068-1|ABD14082.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 78 EPKIISNNNSLS 89
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 311 EPKIISNNNSLS 322
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -1
Query: 192 EPKILSNTESRS 157
EPKI+SN S S
Sbjct: 311 EPKIISNNNSLS 322
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 298 LFLQWLPCLL 307
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 298 LFLQWLPCLL 307
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 298 LFLQWLPCLL 307
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 298 LFLQWLPCLL 307
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 298 LFLQWLPCLL 307
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 298 LFLQWLPCLL 307
>DQ435324-1|ABD92639.1| 152|Apis mellifera OBP3 protein.
Length = 152
Score = 19.4 bits (38), Expect = 4.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 128 CLRPYNAEDIDLDSVLE 178
CL+ N D+DS+LE
Sbjct: 27 CLKQENLNLDDIDSLLE 43
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 366 LFLQWLPCLL 375
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -3
Query: 79 LYLSWLICLI 50
L+L WL CL+
Sbjct: 366 LFLQWLPCLL 375
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 18.6 bits (36), Expect = 7.1
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 122 ISCLRPYNAEDIDLDSVLER 181
+ CLR N D D++L++
Sbjct: 811 LECLRFLNEVISDFDAILDQ 830
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,181
Number of Sequences: 438
Number of extensions: 749
Number of successful extensions: 35
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 43
effective length of database: 127,509
effective search space used: 2550180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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