Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I11
         (479 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein p...   149   2e-36
AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB...   149   2e-36
AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA...   149   2e-36
BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p pro...    28   5.8  
AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA...    28   5.8  
AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA...    28   7.6  

>X77926-1|CAA54898.1|  218|Drosophila melanogaster BBC1 protein
           protein.
          Length = 218

 Score =  149 bits (361), Expect = 2e-36
 Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
 Frame = +2

Query: 56  MGKGNNMIPKXAISISDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVR 235
           MGKGNNMIP        WQR VKTWFNQPAR+ RR  NR+              LRPVVR
Sbjct: 1   MGKGNNMIPNQHYH-KWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVR 59

Query: 236 CPTVRYHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQSV-EV 412
           CPT+RYHTK+RAGRGFTL E++ +G+  +FA+TIGIAVD RR+NKS+ES Q N+Q + E 
Sbjct: 60  CPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEY 119

Query: 413 NIELVLF 433
             +L+LF
Sbjct: 120 RSKLILF 126


>AE014134-1746|ABC65888.1|  218|Drosophila melanogaster CG4651-PB,
           isoform B protein.
          Length = 218

 Score =  149 bits (361), Expect = 2e-36
 Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
 Frame = +2

Query: 56  MGKGNNMIPKXAISISDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVR 235
           MGKGNNMIP        WQR VKTWFNQPAR+ RR  NR+              LRPVVR
Sbjct: 1   MGKGNNMIPNQHYH-KWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVR 59

Query: 236 CPTVRYHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQSV-EV 412
           CPT+RYHTK+RAGRGFTL E++ +G+  +FA+TIGIAVD RR+NKS+ES Q N+Q + E 
Sbjct: 60  CPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEY 119

Query: 413 NIELVLF 433
             +L+LF
Sbjct: 120 RSKLILF 126


>AE014134-1745|AAF52842.1|  218|Drosophila melanogaster CG4651-PA,
           isoform A protein.
          Length = 218

 Score =  149 bits (361), Expect = 2e-36
 Identities = 73/127 (57%), Positives = 89/127 (70%), Gaps = 1/127 (0%)
 Frame = +2

Query: 56  MGKGNNMIPKXAISISDWQRFVKTWFNQPARRHRRKQNRIXXXXXXXXXXXXXXLRPVVR 235
           MGKGNNMIP        WQR VKTWFNQPAR+ RR  NR+              LRPVVR
Sbjct: 1   MGKGNNMIPNQHYH-KWWQRHVKTWFNQPARKVRRHANRVKKAKAVFPRPASGALRPVVR 59

Query: 236 CPTVRYHTKVRAGRGFTLREIRASGLNPSFARTIGIAVDPRRRNKSVESLQINVQSV-EV 412
           CPT+RYHTK+RAGRGFTL E++ +G+  +FA+TIGIAVD RR+NKS+ES Q N+Q + E 
Sbjct: 60  CPTIRYHTKLRAGRGFTLEELKGAGIGANFAKTIGIAVDRRRKNKSLESRQRNIQRLKEY 119

Query: 413 NIELVLF 433
             +L+LF
Sbjct: 120 RSKLILF 126


>BT003457-1|AAO39460.1|  985|Drosophila melanogaster RH34107p
           protein.
          Length = 985

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +2

Query: 251 YHTKVRAG-RGFTLREIRASGLNPSFARTIGIAVDPRR--RNKSVESLQINVQSVEVNIE 421
           YH     G R   L  I A G NP+ A+  G+ V+P R   N S++   +  ++ E   E
Sbjct: 608 YHEHRNEGHRNICLIPISAHGTNPASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHE 667

Query: 422 L 424
           L
Sbjct: 668 L 668


>AE014297-1126|AAF54512.1|  985|Drosophila melanogaster CG3999-PA
           protein.
          Length = 985

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
 Frame = +2

Query: 251 YHTKVRAG-RGFTLREIRASGLNPSFARTIGIAVDPRR--RNKSVESLQINVQSVEVNIE 421
           YH     G R   L  I A G NP+ A+  G+ V+P R   N S++   +  ++ E   E
Sbjct: 608 YHEHRNEGHRNICLIPISAHGTNPASAQMAGMKVEPIRILSNGSIDMAHLRAKAEEHAHE 667

Query: 422 L 424
           L
Sbjct: 668 L 668


>AE014296-884|AAN11612.1|  548|Drosophila melanogaster CG32246-PA
           protein.
          Length = 548

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -2

Query: 181 LFYSILLSTMTTSWLIKPCLHKSLPITYGNGXFWYHIIPFTHF 53
           L  SIL  TMTTSWL    +  +    Y  G  WY+++ F  F
Sbjct: 117 LIASILSITMTTSWLYASFVDLNNG-NYLLGGSWYYLMTFGCF 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,480,478
Number of Sequences: 53049
Number of extensions: 357589
Number of successful extensions: 858
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)