Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I10
         (479 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           30   0.015
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           30   0.015
U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              22   3.0  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    22   3.9  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   3.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   3.9  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   9.1  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 29.9 bits (64), Expect = 0.015
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 256 GHLGVESLVEDCQHGGEEAHGARHRRSSRIEGF*PNSLPCGPK 128
           G+  V +   +  HG  E  G RHR + +++ + P   P GPK
Sbjct: 33  GNAIVSNSASNSVHGHREGLGRRHRYNFQLKPYNPEHKPPGPK 75


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 29.9 bits (64), Expect = 0.015
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 256 GHLGVESLVEDCQHGGEEAHGARHRRSSRIEGF*PNSLPCGPK 128
           G+  V +   +  HG  E  G RHR + +++ + P   P GPK
Sbjct: 34  GNAIVSNSASNSVHGHREGLGRRHRYNFQLKPYNPEHKPPGPK 76


>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 12/49 (24%), Positives = 22/49 (44%)
 Frame = +3

Query: 174 LDLLCRAPWASSPPCWQSSTRLSTPRCPNGSLTHRSLATTQVWVSDLCR 320
           L LLC     +S   W+  T  +     N +++  +  + + W+ D CR
Sbjct: 77  LRLLCSIAGGTSESQWEDVTGSTPLTFVNDTVSFTTTVSARFWLMD-CR 124


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 285 PMSDASSCHLGILESR 238
           P S A SC +GI+  R
Sbjct: 378 PRSSADSCQVGIMAQR 393


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 151 WAKI--LLFYLIFYAVLRGLLRRH 216
           WA +  L+F ++FY+ L   +R H
Sbjct: 227 WAYVIPLIFIILFYSRLLSSIRNH 250


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 151 WAKI--LLFYLIFYAVLRGLLRRH 216
           WA +  L+F ++FY+ L   +R H
Sbjct: 227 WAYVIPLIFIILFYSRLLSSIRNH 250


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 20.6 bits (41), Expect = 9.1
 Identities = 6/16 (37%), Positives = 9/16 (56%)
 Frame = -1

Query: 470 VCFQRPGSHHFRCLSC 423
           VC  R   +H+  L+C
Sbjct: 189 VCGDRASGYHYNALTC 204


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,317
Number of Sequences: 438
Number of extensions: 3468
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13051674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)