Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_I09
(385 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 31 0.51
BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p pro... 31 0.51
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 31 0.51
AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-P... 31 0.51
BT021337-1|AAX33485.1| 659|Drosophila melanogaster LP24076p pro... 27 8.4
AY515709-1|AAR99659.1| 721|Drosophila melanogaster bestrophin 1... 27 8.4
AY061546-1|AAL29094.1| 721|Drosophila melanogaster LP05915p pro... 27 8.4
AF218817-1|AAF32327.1| 721|Drosophila melanogaster Dbest protein. 27 8.4
AF160917-1|AAD46857.2| 620|Drosophila melanogaster LD09009p pro... 27 8.4
AE014297-4003|AAN14091.1| 599|Drosophila melanogaster CG6386-PB... 27 8.4
AE014297-4002|AAF56630.2| 599|Drosophila melanogaster CG6386-PA... 27 8.4
AE014297-1109|AAF54503.1| 721|Drosophila melanogaster CG6264-PA... 27 8.4
AE014134-269|AAF51359.2| 659|Drosophila melanogaster CG10869-PA... 27 8.4
AE013599-1045|AAO41453.1| 694|Drosophila melanogaster CG33183-P... 27 8.4
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and fatty
acid-bindingglycoprotein protein.
Length = 3351
Score = 31.1 bits (67), Expect = 0.51
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +3
Query: 12 TDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EK 182
+D+++ + YP L +D K+++ ++ +K+ CD + EK
Sbjct: 3095 SDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEK 3150
Query: 183 NVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 299
++D ++LK I G++ EK+ LD PFRAGA K ++
Sbjct: 3151 RILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSII 3192
>BT025088-1|ABE73259.1| 1074|Drosophila melanogaster IP14091p protein.
Length = 1074
Score = 31.1 bits (67), Expect = 0.51
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +3
Query: 12 TDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EK 182
+D+++ + YP L +D K+++ ++ +K+ CD + EK
Sbjct: 818 SDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEK 873
Query: 183 NVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 299
++D ++LK I G++ EK+ LD PFRAGA K ++
Sbjct: 874 RILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSII 915
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 31.1 bits (67), Expect = 0.51
Identities = 27/103 (26%), Positives = 50/103 (48%), Gaps = 7/103 (6%)
Frame = +3
Query: 12 TDIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKY---EK 182
+D+++ + YP L +D K+++ ++ +K+ CD + EK
Sbjct: 3095 SDVQVGVIVFEETKRYPALLTSD----GGKINYKGNVADVKLAGIKSFCDNCVEQIITEK 3150
Query: 183 NVIDFMDTLK-IKLGLSNIVLSEKSL---LDLPFRAGAVKHVL 299
++D ++LK I G++ EK+ LD PFRAGA K ++
Sbjct: 3151 RILDIYNSLKEIVKGIAPQA-DEKAFQLALDYPFRAGAAKSII 3192
>AE013599-3769|AAX52680.1| 4129|Drosophila melanogaster CG33519-PB
protein.
Length = 4129
Score = 31.1 bits (67), Expect = 0.51
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = -1
Query: 289 LTAPARNGRSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVSHPVLTKGI 134
+TA GR+ DF+L +++KP+FI+ +SI + VS VL G+
Sbjct: 2002 ITATNSEGRAAVDFNLAVLVEKPTFIVQPESQSIHDY---RPVSTKVLVHGV 2050
>BT021337-1|AAX33485.1| 659|Drosophila melanogaster LP24076p
protein.
Length = 659
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 177 EKNVIDFMDTLKIKLGLSNIVLSEKSLLDL 266
EKNV+ +D L++ LG+ + LS K ++
Sbjct: 488 EKNVLQIIDNLRMTLGIDALELSLKDFREM 517
>AY515709-1|AAR99659.1| 721|Drosophila melanogaster bestrophin 1
protein.
Length = 721
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 289 LTAPARNGRSRSDFSLKTILDK 224
+T + GR R DF++KTI+D+
Sbjct: 196 ITRARKEGRIRDDFAVKTIIDE 217
>AY061546-1|AAL29094.1| 721|Drosophila melanogaster LP05915p
protein.
Length = 721
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 289 LTAPARNGRSRSDFSLKTILDK 224
+T + GR R DF++KTI+D+
Sbjct: 196 ITRARKEGRIRDDFAVKTIIDE 217
>AF218817-1|AAF32327.1| 721|Drosophila melanogaster Dbest protein.
Length = 721
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 289 LTAPARNGRSRSDFSLKTILDK 224
+T + GR R DF++KTI+D+
Sbjct: 196 ITRARKEGRIRDDFAVKTIIDE 217
>AF160917-1|AAD46857.2| 620|Drosophila melanogaster LD09009p
protein.
Length = 620
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 16 TLRFTSRDTHLNIPT 60
T+ +TSRD HL +PT
Sbjct: 249 TIEYTSRDAHLGVPT 263
>AE014297-4003|AAN14091.1| 599|Drosophila melanogaster CG6386-PB,
isoform B protein.
Length = 599
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 16 TLRFTSRDTHLNIPT 60
T+ +TSRD HL +PT
Sbjct: 228 TIEYTSRDAHLGVPT 242
>AE014297-4002|AAF56630.2| 599|Drosophila melanogaster CG6386-PA,
isoform A protein.
Length = 599
Score = 27.1 bits (57), Expect = 8.4
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 16 TLRFTSRDTHLNIPT 60
T+ +TSRD HL +PT
Sbjct: 228 TIEYTSRDAHLGVPT 242
>AE014297-1109|AAF54503.1| 721|Drosophila melanogaster CG6264-PA
protein.
Length = 721
Score = 27.1 bits (57), Expect = 8.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 289 LTAPARNGRSRSDFSLKTILDK 224
+T + GR R DF++KTI+D+
Sbjct: 196 ITRARKEGRIRDDFAVKTIIDE 217
>AE014134-269|AAF51359.2| 659|Drosophila melanogaster CG10869-PA
protein.
Length = 659
Score = 27.1 bits (57), Expect = 8.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 177 EKNVIDFMDTLKIKLGLSNIVLSEKSLLDL 266
EKNV+ +D L++ LG+ + LS K ++
Sbjct: 488 EKNVLQIIDNLRMTLGIDALELSLKDFREM 517
>AE013599-1045|AAO41453.1| 694|Drosophila melanogaster CG33183-PC,
isoform C protein.
Length = 694
Score = 27.1 bits (57), Expect = 8.4
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -1
Query: 301 KRTCLTAPARNG----RSRSDFSLKTILDKPSFILSVSIKSITFFSYLSNVS 158
KR T PA++ + + +K + D P+ S S S++ FS +SN+S
Sbjct: 119 KRLATTRPAQSRPQQQQQQQQQQVKFLSDPPALARSSSFSSLSSFSSISNIS 170
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,171,942
Number of Sequences: 53049
Number of extensions: 270762
Number of successful extensions: 669
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1045179750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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