Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I09
         (385 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   0.93 
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    23   1.6  
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   2.1  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   2.1  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   4.9  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.5  

>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 0.93
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 31  SRDTHLNIPTLSYTILI*N 87
           +R THLN    SYTI+I N
Sbjct: 473 ARFTHLNHADFSYTIVINN 491


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -3

Query: 332 ELIDARLRHCQENVFNSTGAEWKIQKRLFTQNNIGQT 222
           EL++A L+  Q         E +IQK+  T N I +T
Sbjct: 766 ELVEAILKRVQTPFDPDVPIELQIQKQSHTPNGIVKT 802


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = +3

Query: 15  DIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKYEKNVID 194
           D +I +  + ++  Y ILYD +   +  +  F ++ER+  +  +        + E+  I 
Sbjct: 371 DTEILIGNNENEGTYFILYDFNDIFEKDQASFLERERF--LGIINNIFKNMSQIEREAIT 428

Query: 195 FMDT 206
           F  T
Sbjct: 429 FQYT 432


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 14/64 (21%), Positives = 29/64 (45%)
 Frame = +3

Query: 15  DIKIYLAGHTSKYPYPILYDTDLKLKSSKLHFDDKERYERMPFVKTGCDTFDKYEKNVID 194
           D +I +  + ++  Y ILYD +   +  +  F ++ER+  +  +        + E+  I 
Sbjct: 371 DTEILIGNNENEGTYFILYDFNDIFEKDQASFLERERF--LGIINNIFKNMSQIEREAIT 428

Query: 195 FMDT 206
           F  T
Sbjct: 429 FQYT 432


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -2

Query: 246 HSKQYWTNQVLF*VYP 199
           ++K +W N + + VYP
Sbjct: 20  NNKGWWKNAIFYQVYP 35


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -1

Query: 265 RSRSDFSLKTILDKPSFILSVSIKS 191
           ++ +D  L+   DK  F+L+ SIK+
Sbjct: 239 KTPNDEELEKPTDKRMFVLAASIKA 263


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 8/32 (25%), Positives = 14/32 (43%)
 Frame = -2

Query: 132 ARSALCRRNVVWSSLVSNQYRIR*GRDI*MCV 37
           A+  +      W      QY+IR  +D+  C+
Sbjct: 596 AKKYVAGEQCCWHCFNCTQYQIRDHKDVTQCI 627


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,452
Number of Sequences: 438
Number of extensions: 1944
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9424380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)