Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I06
         (516 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC...   224   5e-59
AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA...   224   5e-59
AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB...   206   1e-53
AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    31   0.70 
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    31   0.70 
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    31   0.70 

>AE013599-1421|AAM71028.1|  155|Drosophila melanogaster CG8857-PC,
           isoform C protein.
          Length = 155

 Score =  224 bits (548), Expect = 5e-59
 Identities = 110/140 (78%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
 Frame = +1

Query: 22  MADQTEKAFQKQATVFLNRK---GGMKRKDMRHSKNVGLGFKTPREAV*GTYIDKKCPFT 192
           MADQ E+AFQKQ  V LNRK   G  K+K +R S++VGLGFKTPREA+ GTYIDKKCP+T
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60

Query: 193 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIG 372
           G+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE G
Sbjct: 61  GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120

Query: 373 DIVTIGECRPLSKTVRFNVL 432
           DIVTIGECRPLSKTVRFNVL
Sbjct: 121 DIVTIGECRPLSKTVRFNVL 140


>AE013599-1420|AAF58552.1|  155|Drosophila melanogaster CG8857-PA,
           isoform A protein.
          Length = 155

 Score =  224 bits (548), Expect = 5e-59
 Identities = 110/140 (78%), Positives = 122/140 (87%), Gaps = 3/140 (2%)
 Frame = +1

Query: 22  MADQTEKAFQKQATVFLNRK---GGMKRKDMRHSKNVGLGFKTPREAV*GTYIDKKCPFT 192
           MADQ E+AFQKQ  V LNRK   G  K+K +R S++VGLGFKTPREA+ GTYIDKKCP+T
Sbjct: 1   MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDGTYIDKKCPWT 60

Query: 193 GNVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIG 372
           G+V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE G
Sbjct: 61  GDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHG 120

Query: 373 DIVTIGECRPLSKTVRFNVL 432
           DIVTIGECRPLSKTVRFNVL
Sbjct: 121 DIVTIGECRPLSKTVRFNVL 140


>AE013599-1422|AAM71029.1|  154|Drosophila melanogaster CG8857-PB,
           isoform B protein.
          Length = 154

 Score =  206 bits (503), Expect = 1e-53
 Identities = 101/139 (72%), Positives = 116/139 (83%), Gaps = 2/139 (1%)
 Frame = +1

Query: 22  MADQ-TEKAFQKQ-ATVFLNRKGGMKRKDMRHSKNVGLGFKTPREAV*GTYIDKKCPFTG 195
           MADQ TE++F+KQ A V + RK    +K  R  + +GLGF+ P EA+ GTYIDKKCP+TG
Sbjct: 1   MADQQTERSFRKQHAVVVVRRKSPNLKKRPRFYRQIGLGFRAPAEAIDGTYIDKKCPWTG 60

Query: 196 NVSIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHLSPCFRDVEIGD 375
           +V IRGRILTGVV+K KMQRTIVIRRDYLH++ KY+RFEKRHRNMSVH SP FRDVE GD
Sbjct: 61  DVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFEKRHRNMSVHCSPVFRDVEHGD 120

Query: 376 IVTIGECRPLSKTVRFNVL 432
           IVTIGECRPLSKTVRFNVL
Sbjct: 121 IVTIGECRPLSKTVRFNVL 139


>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 202 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 342
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 202 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 342
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 15/47 (31%), Positives = 25/47 (53%)
 Frame = +1

Query: 202 SIRGRILTGVVQKMKMQRTIVIRRDYLHYLPKYNRFEKRHRNMSVHL 342
           S++ RI+    + M+  R++ I+  Y HYLPK+       R +  HL
Sbjct: 252 SVKERIVQFAEKFMRPSRSLAIKSVYAHYLPKFTDQNAATRTILNHL 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,250,625
Number of Sequences: 53049
Number of extensions: 523256
Number of successful extensions: 1004
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)