Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_I05
         (463 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U32989-1|AAB08514.1|  406|Homo sapiens tryptophan oxygenase prot...   122   6e-28
BC005355-1|AAH05355.1|  406|Homo sapiens tryptophan 2,3-dioxygen...   122   6e-28

>U32989-1|AAB08514.1|  406|Homo sapiens tryptophan oxygenase
           protein.
          Length = 406

 Score =  122 bits (294), Expect = 6e-28
 Identities = 55/113 (48%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = +1

Query: 124 DESMGQEGEHLGNEAGMLYGEYLMLDKLLSAQRMLSAESSKPVHDEHLFIVTHQAYELWF 303
           +E   Q G +  ++ G++YG YL L+K+L+AQ + S      +HDEHLFI+THQAYELWF
Sbjct: 24  EEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWF 83

Query: 304 KQIIFEVDSVRSLLDVEGL-DESHTMEILTRLNRIVLILKLLVEQVMILETMT 459
           KQI++E+DSVR +     + DE + +++++R++R+ +ILKLLV+Q  ILETMT
Sbjct: 84  KQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMT 136


>BC005355-1|AAH05355.1|  406|Homo sapiens tryptophan 2,3-dioxygenase
           protein.
          Length = 406

 Score =  122 bits (294), Expect = 6e-28
 Identities = 55/113 (48%), Positives = 83/113 (73%), Gaps = 1/113 (0%)
 Frame = +1

Query: 124 DESMGQEGEHLGNEAGMLYGEYLMLDKLLSAQRMLSAESSKPVHDEHLFIVTHQAYELWF 303
           +E   Q G +  ++ G++YG YL L+K+L+AQ + S      +HDEHLFI+THQAYELWF
Sbjct: 24  EEDKSQTGVNRASKGGLIYGNYLHLEKVLNAQELQSETKGNKIHDEHLFIITHQAYELWF 83

Query: 304 KQIIFEVDSVRSLLDVEGL-DESHTMEILTRLNRIVLILKLLVEQVMILETMT 459
           KQI++E+DSVR +     + DE + +++++R++R+ +ILKLLV+Q  ILETMT
Sbjct: 84  KQILWELDSVREIFQNGHVRDERNMLKVVSRMHRVSVILKLLVQQFSILETMT 136


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,511,846
Number of Sequences: 237096
Number of extensions: 1061287
Number of successful extensions: 2251
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2249
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3929066862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)