Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_I04
(641 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical pr... 199 2e-51
U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical pr... 199 2e-51
AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical... 183 1e-46
U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical pr... 111 4e-25
U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical pr... 81 9e-16
>U39645-9|AAM51511.1| 297|Caenorhabditis elegans Hypothetical
protein C14F11.1b protein.
Length = 297
Score = 199 bits (485), Expect = 2e-51
Identities = 98/179 (54%), Positives = 128/179 (71%)
Frame = +1
Query: 103 TALRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKA 282
TA+R S WWS+V MGPPD ILG+TEA+K D++P K+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 283 EEILHKKGLNHEYAPISGEPQHYYLHAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLG 462
E + L+ EYA I G P+ + A+LA GE+S VI+NK T Q++SGTGALR+G
Sbjct: 69 ERQVIAANLDKEYAGIVGLPE--FTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIG 126
Query: 463 LEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFEPKTNGFELQWALEDISK 639
EF++ YAK K I+ PTPTWGNH I + K+YRY++ T GF+ AL DI++
Sbjct: 127 SEFLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQ 184
>U39645-8|AAA80361.1| 414|Caenorhabditis elegans Hypothetical
protein C14F11.1a protein.
Length = 414
Score = 199 bits (485), Expect = 2e-51
Identities = 98/179 (54%), Positives = 128/179 (71%)
Frame = +1
Query: 103 TALRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKA 282
TA+R S WWS+V MGPPD ILG+TEA+K D++P K+NLGVGAYRDD+GKPFVLPSV++A
Sbjct: 10 TAVRGKS-WWSHVEMGPPDAILGVTEAFKADSNPKKINLGVGAYRDDQGKPFVLPSVKEA 68
Query: 283 EEILHKKGLNHEYAPISGEPQHYYLHAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLG 462
E + L+ EYA I G P+ + A+LA GE+S VI+NK T Q++SGTGALR+G
Sbjct: 69 ERQVIAANLDKEYAGIVGLPE--FTKLSAQLALGENSDVIKNKRIFTTQSISGTGALRIG 126
Query: 463 LEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFEPKTNGFELQWALEDISK 639
EF++ YAK K I+ PTPTWGNH I + K+YRY++ T GF+ AL DI++
Sbjct: 127 SEFLSK-YAKTKVIYQPTPTWGNHVPIFKFAGVDVKQYRYYDKSTCGFDETGALADIAQ 184
>AF003140-10|AAD47121.2| 419|Caenorhabditis elegans Hypothetical
protein C44E4.3 protein.
Length = 419
Score = 183 bits (445), Expect = 1e-46
Identities = 89/185 (48%), Positives = 129/185 (69%), Gaps = 2/185 (1%)
Frame = +1
Query: 91 FVGCTALRASST--WWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVL 264
F+ T + A W+ NVP+ P D ILG+TEA+KKDT+PNK+NLGVGAYRDD+GKPFVL
Sbjct: 8 FMSTTTVTAQPVLPWFRNVPLAPADPILGVTEAFKKDTNPNKINLGVGAYRDDQGKPFVL 67
Query: 265 PSVRKAEEILHKKGLNHEYAPISGEPQHYYLHAVAKLAFGEDSQVIQNKSNCTVQTLSGT 444
+VR+AE+ + ++ EY+ I+G P+ + AKLAFG++S+VI++ T Q++SGT
Sbjct: 68 RAVREAEQQIIDAKMDKEYSTITGVPE--FAPLAAKLAFGDNSEVIRDGRVFTTQSISGT 125
Query: 445 GALRLGLEFITNHYAKAKEIWMPTPTWGNHPQICNMLKLPHKKYRYFEPKTNGFELQWAL 624
GALR+G +F+ + +K ++ PTPTW NH + L + YRY+ +T GF+++ AL
Sbjct: 126 GALRIGGQFV-EKFIPSKTLFYPTPTWANHLPVFRNSGLSIQPYRYYNQETLGFDVEGAL 184
Query: 625 EDISK 639
EDISK
Sbjct: 185 EDISK 189
>U58726-4|AAB00578.1| 408|Caenorhabditis elegans Hypothetical
protein T01C8.5 protein.
Length = 408
Score = 111 bits (267), Expect = 4e-25
Identities = 56/138 (40%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Frame = +1
Query: 124 TWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHK 300
+++ +P+ PP + + Y +T P KVNL +GAYR +EG+P+VLP V + E EI +
Sbjct: 2 SFFDGIPVAPPIEVFHKNKMYLDETAPVKVNLTIGAYRTEEGQPWVLPVVHETEVEIAND 61
Query: 301 KGLNHEYAPISGEPQHYYLHAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITN 480
LNHEY P+ G + A +L G +S I+ + + VQ LSGTGALR G EF+ +
Sbjct: 62 TSLNHEYLPVLG--HEGFRKAATELVLGAESPAIKEERSFGVQCLSGTGALRAGAEFLAS 119
Query: 481 HYAKAKEIWMPTPTWGNH 534
K +++ PTWGNH
Sbjct: 120 -VCNMKTVYVSNPTWGNH 136
>U58726-3|AAB00577.1| 357|Caenorhabditis elegans Hypothetical
protein T01C8.4 protein.
Length = 357
Score = 80.6 bits (190), Expect = 9e-16
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Frame = +1
Query: 124 TWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHK 300
+++ + + P L +E ++K+ P K+NL + AYR ++G+P+VLP VR+ E + H+
Sbjct: 4 SFFDGIHVASPIKELHTSELFQKEICPVKINLAIEAYRTEDGEPWVLPVVREIELKFPHE 63
Query: 301 KGLNHEYAPISGEPQHYYLHAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITN 480
NHEY PI G + + L G DS I+ + +VQ +SGTGA+ +G EF+
Sbjct: 64 PHHNHEYLPILGHDG--FCKSATALLLGNDSLAIKEGRSFSVQCISGTGAICVGAEFLA- 120
Query: 481 HYAKAKEIWMPTP 519
K I++ P
Sbjct: 121 QVLSMKTIYVSNP 133
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,718,869
Number of Sequences: 27780
Number of extensions: 363797
Number of successful extensions: 694
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 683
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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