Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_I03
(507 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 214 4e-56
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 214 4e-56
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 213 5e-56
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 213 9e-56
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 210 4e-55
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 207 5e-54
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 129 3e-35
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 106 1e-23
12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179 30 1.2
07_03_0258 - 15907667-15907909,15909015-15909081,15910218-15910237 27 8.7
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 27 8.7
03_04_0054 + 16883678-16883719,16884667-16884723,16884852-168849... 27 8.7
01_07_0014 - 40455673-40455723,40455815-40455892,40455987-404560... 27 8.7
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 214 bits (522), Expect = 4e-56
Identities = 101/141 (71%), Positives = 117/141 (82%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L LL+ HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 108 LKLLESHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 167
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 168 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 227
Query: 370 MQLLRDNLTLWTSDTQGDGDE 432
MQLLRDNLTLWTSD D E
Sbjct: 228 MQLLRDNLTLWTSDISEDTAE 248
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 214 bits (522), Expect = 4e-56
Identities = 100/134 (74%), Positives = 115/134 (85%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L LLD HL+P ++ PESKVFYLKMKGDYYRYLAE TG R E++ AY+ A +I+
Sbjct: 326 LKLLDSHLVPSSTAPESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIAL 385
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
A++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL+E+SYKDSTLI
Sbjct: 386 AELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLSEESYKDSTLI 445
Query: 370 MQLLRDNLTLWTSD 411
MQLLRDNLTLWTSD
Sbjct: 446 MQLLRDNLTLWTSD 459
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 213 bits (521), Expect = 5e-56
Identities = 104/145 (71%), Positives = 117/145 (80%), Gaps = 1/145 (0%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L LLD HL+P ++ ESKVFYLKMKGDY+RYLAE TG R E + AY+ A +I+
Sbjct: 102 LKLLDSHLVPSSTAAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIAL 161
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
A + PTHPIRLGLALNFSVFYYEILNSPDKAC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 162 ADLAPTHPIRLGLALNFSVFYYEILNSPDKACNLAKQAFDEAISELDTLGEESYKDSTLI 221
Query: 370 MQLLRDNLTLWTSD-TQGDGDEPAE 441
MQLLRDNLTLWTSD T+ GDE E
Sbjct: 222 MQLLRDNLTLWTSDLTEDGGDEVKE 246
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 213 bits (519), Expect = 9e-56
Identities = 99/141 (70%), Positives = 114/141 (80%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L LLD HL+P A ESKVFYLKMKGDY+RYLAE +G+ R E + AY+ A +I+
Sbjct: 85 LALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIAL 144
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
A + PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELD+L E+SYKDSTLI
Sbjct: 145 ADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLI 204
Query: 370 MQLLRDNLTLWTSDTQGDGDE 432
MQLLRDNLTLWTSD DG +
Sbjct: 205 MQLLRDNLTLWTSDANDDGGD 225
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 210 bits (514), Expect = 4e-55
Identities = 101/141 (71%), Positives = 114/141 (80%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L LLD HL+P A+ ESKVFYLKMKGDY+RYLAE +G R E++ AY+ A +I+
Sbjct: 107 LKLLDSHLVPSATAAESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIAL 166
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
A + THPIRLGLALNFSVFYYEILNSPD+AC LAKQAFDDAIAELDTL E+SYKDSTLI
Sbjct: 167 ADLPTTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDDAIAELDTLGEESYKDSTLI 226
Query: 370 MQLLRDNLTLWTSDTQGDGDE 432
MQLLRDNLTLWTSD DG +
Sbjct: 227 MQLLRDNLTLWTSDNAEDGGD 247
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 207 bits (505), Expect = 5e-54
Identities = 98/141 (69%), Positives = 115/141 (81%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L LLD+ L+P A+ ++KVFYLKMKGDY+RYLAE TG R + + AYQ A +I+
Sbjct: 112 LRLLDERLVPAAAAVDAKVFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAM 171
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
++ PTHPIRLGLALNFSVFYYEILNSPD+AC LAKQAFD+AI+ELDTL E+SYKDSTLI
Sbjct: 172 KELSPTHPIRLGLALNFSVFYYEILNSPDRACTLAKQAFDEAISELDTLGEESYKDSTLI 231
Query: 370 MQLLRDNLTLWTSDTQGDGDE 432
MQLLRDNLTLWTSD Q DG +
Sbjct: 232 MQLLRDNLTLWTSDMQDDGGD 252
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 129 bits (312), Expect(2) = 3e-35
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +1
Query: 172 AFEISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSY 351
A + ++ + PT PIRLGLALN SVFY EI+NSPDKACQLAK AFD+A+AEL +L+E++Y
Sbjct: 146 ASKTAQTDLTPTDPIRLGLALNISVFYCEIMNSPDKACQLAKNAFDEAVAELPSLSEENY 205
Query: 352 KDSTLIMQLLRDNLTLWTSDTQGDGDEPAEGGD 450
KDSTLIMQLLRDNL LW SD D D+ E D
Sbjct: 206 KDSTLIMQLLRDNLALWNSDMADDADDIRERTD 238
Score = 36.3 bits (80), Expect(2) = 3e-35
Identities = 17/29 (58%), Positives = 19/29 (65%)
Frame = +1
Query: 82 KGDYYRYLAEVATGETRHSVVEDSQKAYQ 168
KGDYYRYLAE TG + V E S AY+
Sbjct: 85 KGDYYRYLAEFKTGTEKIEVSELSLNAYE 113
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 106 bits (254), Expect = 1e-23
Identities = 59/137 (43%), Positives = 87/137 (63%)
Frame = +1
Query: 10 LCLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQKAYQDAFEISK 189
L ++ H +P A++ E+ VF+ KMKGDYYRYLAE +TG + + + S AYQ A+ ++
Sbjct: 99 LSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQ-AWPCAQ 157
Query: 190 AKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAFDDAIAELDTLNEDSYKDSTLI 369
FS+ EI+NSP++A Q+AKQA D+A AE+++ + YKDS L+
Sbjct: 158 L---------------FSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLM 200
Query: 370 MQLLRDNLTLWTSDTQG 420
MQLL++NL LWTS+ G
Sbjct: 201 MQLLKENLALWTSELTG 217
>12_02_0977 + 24999211-25000275,25000375-25000521,25000805-25001179
Length = 528
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +1
Query: 13 CLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETR-HSV----VEDSQKAYQDAF 177
C+L+ +I + +PES++ L + +A VA TR S+ ++ A DA
Sbjct: 252 CVLEPGMIERVLHPESEIRELAIHSAMGGTIAVVAAAATRLRSLRMFNIQVGTVAVDDAV 311
Query: 178 EISKAKMQPTHPIRLGL 228
E+ M+ T P R+ +
Sbjct: 312 ELRNLHMRDTRPSRIAI 328
>07_03_0258 - 15907667-15907909,15909015-15909081,15910218-15910237
Length = 109
Score = 27.1 bits (57), Expect = 8.7
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 316 IAELDTLNEDSYKDSTLIMQL-LRDNLTLWTSDTQGDGDEPAEGGDN*CVAA 468
I +LD L + + I +L LR L W D GDGDE GG CV A
Sbjct: 8 IIQLDKLLVRTIDSTQAIFELKLRLGLGSWDGD--GDGDEKVSGG---CVEA 54
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 27.1 bits (57), Expect = 8.7
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Frame = +1
Query: 88 DYYRYLAEVATGETRHSVVEDSQKAYQDAFEIS---KAKMQPTHPIR-----LGLALNFS 243
+Y +Y+ + A E R V ++ + D I K K + H +R L +A S
Sbjct: 321 EYRKYVEKDAAFERRFQQVFVAEPSVPDTISILRGLKEKYEGHHGVRIQDRALVVAAQLS 380
Query: 244 VFYYEILNSPDKACQLAKQAFDDAIAELDTLNED 345
Y + PDKA L +A + +LD+ E+
Sbjct: 381 ARYIMGRHLPDKAIDLVDEACANVRVQLDSQPEE 414
>03_04_0054 +
16883678-16883719,16884667-16884723,16884852-16884959,
16885028-16885102,16885744-16885833,16885950-16886057,
16886137-16886211,16886371-16886433,16886531-16886924,
16888539-16888651,16888799-16888829,16888987-16889864
Length = 677
Score = 27.1 bits (57), Expect = 8.7
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +1
Query: 178 EISKAKMQPTHPIRLGLALNFSVFYYEILNSPDKACQLAKQAF--DDAIAELDTLNEDSY 351
E K T+ L AL F +Y+I + ++ QLA+ AF ++ ++ + L + +
Sbjct: 78 EFFKVHCPDTNSAYLDKALQFGDLHYQINDFKEQTLQLARLAFHEEEEKSQAELLEKLNK 137
Query: 352 KDSTLIMQLLR 384
+ I++L R
Sbjct: 138 SNKDTIVELCR 148
>01_07_0014 -
40455673-40455723,40455815-40455892,40455987-40456049,
40456250-40456390,40456851-40456949,40457403-40457477,
40457556-40457652,40457738-40457805,40458456-40458512,
40458613-40458671,40458798-40458921,40459208-40459264,
40459378-40459457,40459585-40459793,40459868-40459986
Length = 458
Score = 27.1 bits (57), Expect = 8.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 256 EILNSPDKACQLAKQAFDDAIAELDTLNEDSYKD 357
E+ + A LAK A DD EL LN D+Y +
Sbjct: 73 EVAQAKAAAKALAKGAVDDVADELKELNMDNYDE 106
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,310,741
Number of Sequences: 37544
Number of extensions: 235628
Number of successful extensions: 674
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 674
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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